TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158270806|gb|EDO96640.1| alpha tubulin 2
[Chlamydomonas reinhardtii]
(451 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00276 613 e-176
12457 397 e-115
06360 304 5e-83
03702 237 7e-63
17215 231 6e-61
16482 206 1e-53
13181 190 1e-48
04882 176 1e-44
05902 134 7e-32
25015 108 4e-24
28905 99 3e-21
39157 91 8e-19
31457 91 1e-18
19746 33 0.16
>00276
Length = 1330
Score = 613 bits (1582), Expect = e-176, Method: Compositional matrix adjust.
Identities = 286/353 (81%), Positives = 319/353 (90%)
Frame = -3
Query: 80 TGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLALDRIRKLADNCTGLQGFLVFN 139
TGTYRQL PEQL++GKEDAANN+ARGHYTIGKE+VDL LDRIRKLAD CTGLQGFL+F+
Sbjct: 1328 TGTYRQL-SPEQLVTGKEDAANNYARGHYTIGKELVDLVLDRIRKLADQCTGLQGFLIFH 1152
Query: 140 AVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTD 199
+ VDYGKKSKL F +YP+PQVSTAVVEPYNS+L+TH+ LEH+D
Sbjct: 1151 SFGGGTGSGFTSLXMERLSVDYGKKSKLEFXIYPAPQVSTAVVEPYNSILTTHTTLEHSD 972
Query: 200 VAVMLDNEAIYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNL 259
A M+DNEAIYDICRR+LDIERPTYTNLNRLI Q++SS+TASLRFDGALNVD+TEFQTNL
Sbjct: 971 CAFMVDNEAIYDICRRNLDIERPTYTNLNRLIXQIVSSITASLRFDGALNVDLTEFQTNL 792
Query: 260 VPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNAAFEPASMMVKCDPRHGKYMACCLMY 319
VPYPRIHF L++YAP+ISAEKAYHEQL VAEITNA FEPA+ +VKCDPRHGKYMACC++Y
Sbjct: 791 VPYPRIHFPLATYAPVISAEKAYHEQLXVAEITNACFEPANQLVKCDPRHGKYMACCMLY 612
Query: 320 RGDVVPKDVNASVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIS 379
RGDVVPKDVNA++ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+S
Sbjct: 611 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 432
Query: 380 NSTAIGEIFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDF 432
N+TAI E ++RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD+
Sbjct: 431 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 273
>12457
Length = 781
Score = 397 bits (1021), Expect(2) = e-115, Method: Compositional matrix adjust.
Identities = 186/241 (77%), Positives = 210/241 (87%)
Frame = -1
Query: 65 CIFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLALDRIRK 124
C +DLEPTVVDEVRTGTYRQLFHPEQL++GKEDAANN+ARGHYTIGKEIVDL LDRIRK
Sbjct: 724 CRLVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLDRIRK 545
Query: 125 LADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTAVVEP 184
LAD CTGLQGFL+F++ VDYGKKSKL F +YP+PQVSTAVVEP
Sbjct: 544 LADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 365
Query: 185 YNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRF 244
YNS+L+TH+ LEH+D A M+DNEAIYDICRR+LDIERPTYTNLNRLI Q++SS+TASLRF
Sbjct: 364 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 185
Query: 245 DGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNAAFEPASMMVK 304
DGALNVD+TEFQTNLVPYPRIHF L++YAP+ISAEKAYHEQL+VAEITNA FEPA+ MVK
Sbjct: 184 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVK 5
Query: 305 C 305
C
Sbjct: 4 C 2
Score = 35.0 bits (79), Expect(2) = e-115, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -2
Query: 45 GDDAFNTFFSETGAGKHVPRCIFLDLEP 72
GDD+F T SETGAGKHVPR + P
Sbjct: 780 GDDSF-TPLSETGAGKHVPRAVSSXXSP 700
>06360
Length = 1896
Score = 304 bits (779), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 139/178 (78%), Positives = 154/178 (86%)
Frame = -1
Query: 1 MREVISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGK 60
MRE IS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKTIGGGDD+FNTFFSETGAGK
Sbjct: 1710 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 1531
Query: 61 HVPRCIFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLALD 120
HVPR +F+DLEPTVVDEVRTGTYRQLFHPEQL++GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 1530 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLD 1351
Query: 121 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVS 178
RIRKLAD CTGLQGFL+F++ VDYGKKSKL F +YP+PQVS
Sbjct: 1350 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVS 1177
>03702
Length = 1932
Score = 237 bits (604), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 113/150 (75%), Positives = 132/150 (88%), Gaps = 1/150 (0%)
Frame = +1
Query: 159 VDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLD 218
VDYGKKSKL F +YP+PQVSTAVVEPYNS+L+TH+ LEH+D A M+DNEAIYDICRR+LD
Sbjct: 1471 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 1650
Query: 219 IERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSY-APIIS 277
IERP YTNLNRLI Q++SS+TASLRFDGALNVD+TEFQTNLVP P H + + P+IS
Sbjct: 1651 IERPXYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPTP--HPLPPGHLCPVIS 1824
Query: 278 AEKAYHEQLSVAEITNAAFEPASMMVKCDP 307
AEKAYHEQL+VAE+TNA FEPA+ +VKCDP
Sbjct: 1825 AEKAYHEQLTVAEVTNACFEPANQLVKCDP 1914
>17215
Length = 632
Score = 231 bits (588), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 104/116 (89%), Positives = 113/116 (97%)
Frame = +3
Query: 317 LMYRGDVVPKDVNASVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 376
++YRGDVVPKDVNA++ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVC
Sbjct: 3 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 182
Query: 377 MISNSTAIGEIFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDF 432
M+SN+TAI E ++RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD+
Sbjct: 183 MLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 350
>16482
Length = 837
Score = 206 bits (525), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 148/248 (59%)
Frame = +1
Query: 1 MREVISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGK 60
MRE++ + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 100 MREIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 273
Query: 61 HVPRCIFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLALD 120
+VPR + +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 274 YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 453
Query: 121 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTA 180
+RK A++C LQGF + +++ +Y + F+V PSP+VS
Sbjct: 454 VVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 633
Query: 181 VVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLIAQVISSLTA 240
VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN L++ +S +T
Sbjct: 634 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 813
Query: 241 SLRFDGAL 248
LRF G L
Sbjct: 814 CLRFPGQL 837
>13181
Length = 1092
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 132/223 (59%)
Frame = -3
Query: 210 YDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFML 269
YDIC R+L + PTY +LN L++ +S +T LRF G LN D+ + N+VP+PR+HF +
Sbjct: 1090 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 911
Query: 270 SSYAPIISAEKAYHEQLSVAEITNAAFEPASMMVKCDPRHGKYMACCLMYRGDVVPKDVN 329
+AP+ S + L+V E+T F+ +MM CDPRHG+Y+ M+RG + K+V+
Sbjct: 910 PGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVD 731
Query: 330 ASVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIGEIFS 389
+ ++ K + FV+W P K + PP ++ + + NSTAI E+F
Sbjct: 730 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFVGNSTAIQELFK 575
Query: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDF 432
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L ++
Sbjct: 574 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 446
>04882
Length = 1136
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 125/214 (58%)
Frame = +2
Query: 219 IERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISA 278
+ PTY +LN L++ +S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S
Sbjct: 314 VHTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR 493
Query: 279 EKAYHEQLSVAEITNAAFEPASMMVKCDPRHGKYMACCLMYRGDVVPKDVNASVATIKTK 338
+ L+V E+T F+ +MM CDPRHG+Y+ ++RG + K+V+ + ++ K
Sbjct: 494 GSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNK 673
Query: 339 RTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIGEIFSRLDHKFDLM 398
+ FV+W P K + PP ++ + I NSTAI E+F R+ +F M
Sbjct: 674 NSSYFVEWIPNNVKTAVCDIPPR--------GLKMSATFIGNSTAIQELFKRISEQFTAM 829
Query: 399 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDF 432
+ ++AF+HWY GEGM+E EF+EA ++ L ++
Sbjct: 830 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 931
>05902
Length = 1127
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 156/281 (55%), Gaps = 9/281 (3%)
Frame = +2
Query: 161 YGKKSKLGFTVYPS-PQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDI 219
+ KK ++V+P+ ++S VV+PYNS+L+ L ++ D V+LDN A+ I L I
Sbjct: 89 FPKKLIQTYSVFPNVDEISDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIAADRLHI 268
Query: 220 ERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIIS-A 278
+ PT+ +N+L++ V+S+ T +LR+ G +N D+ +L+P PR+HF+++ Y P+ + +
Sbjct: 269 DTPTFAQVNQLVSTVMSTSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDS 448
Query: 279 EKAYHEQLSVAEITNAAFEPASMMVKCDPRHGK----YMACCLMYRGDVVPKDVNASVAT 334
+ A + +V ++ +P +MMV P H + Y++ + +G+V P V+ S+
Sbjct: 449 QVANVRKTTVLDVMRRLLQPKNMMVST-PVHRQANHCYISILNIIQGEVDPTQVHKSLQR 625
Query: 335 IKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIGEIFSRLDHK 394
I+ ++ QF+ W P + ++ + P V ++ + M++N T+I +F R+ +
Sbjct: 626 IRERKLAQFIPWGPASIQVALSRKSPYVQTAHRVSGL-----MLANHTSISHLFERILRQ 790
Query: 395 FDLMYAKRAFVHWYVGEGMEE---GEFSEAREDLAALEKDF 432
+D + + AF+ + E + + EF +RE L L ++
Sbjct: 791 YDKLRKREAFMDQFKKEAIFKDNLDEFDNSREALQLLVDEY 913
>25015
Length = 458
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 76/121 (62%)
Frame = -3
Query: 21 WELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRCIFLDLEPTVVDEVRT 80
WE+ EHGI P G D + + N +++E GK+VPR + +DLEP +D VR+
Sbjct: 360 WEVISDEHGIDPTGTYHGDSDLQ--LERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRS 187
Query: 81 GTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLALDRIRKLADNCTGLQGFLVFNA 140
G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK A++C LQGF + ++
Sbjct: 186 GPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHS 7
Query: 141 V 141
+
Sbjct: 6 L 4
>28905
Length = 425
Score = 99.0 bits (245), Expect = 3e-21, Method: Composition-based stats.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 1/134 (0%)
Frame = -1
Query: 258 NLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNAAFEPASMMVKCDPRHGKYMACCL 317
N+VP+PR+HF + +AP+ S + L+V E+T F+ +MM CDPRHG+Y+
Sbjct: 380 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 201
Query: 318 MYRGDVVPKDVNASVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM 377
M+RG + K+V+ + ++ K + FV+W P K + PP ++ +
Sbjct: 200 MFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMSGTF 45
Query: 378 ISNSTAI-GEIFSR 390
I NSTAI G +F R
Sbjct: 44 IGNSTAIQGRLFKR 3
>39157
Length = 488
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Frame = -1
Query: 1 MREVISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGK 60
MRE++ + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 443 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ--LERINVYYNEATGGK 270
Query: 61 HVPRCIFLDLEPTVVDEVRTGT--YRQLFHPEQLISGKEDAANNFARGHYTI-GKEIVDL 117
+VPR + +DLEP +D VR+G+ ++F P+ + G+ A NN+ + T G E+VD
Sbjct: 269 YVPRAVLVDLEPGTMDSVRSGSPFGPKIFRPDNFVFGQSGAGNNWGQKDTTQRGAELVDS 90
Query: 118 ALDRIRK 124
LD +RK
Sbjct: 89 VLDVVRK 69
>31457
Length = 1530
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 68/122 (55%)
Frame = +3
Query: 311 KYMACCLMYRGDVVPKDVNASVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAK 370
KY+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 234 KYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------G 389
Query: 371 VQRAVCMISNSTAIGEIFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
++ + I NSTAI E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 390 LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 569
Query: 431 DF 432
++
Sbjct: 570 EY 575
>19746
Length = 446
Score = 33.5 bits (75), Expect = 0.16, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 372 QRAVCMISNSTAIGEIFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 421
+++ ++SNS + + K M+A RA++H YV G+ E +F +A
Sbjct: 130 EKSATLVSNSRSSTRPLDDIMEKAWKMFASRAYIHQYVKRGLSEEDFLDA 279
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|159467393|ref|XP_001691876.1| alpha tubulin 1
[Chlamydomonas reinhardtii]
(451 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00276 613 e-176
12457 397 e-115
06360 304 5e-83
03702 237 7e-63
17215 231 6e-61
16482 206 1e-53
13181 190 1e-48
04882 176 1e-44
05902 134 7e-32
25015 108 4e-24
28905 99 3e-21
39157 91 8e-19
31457 91 1e-18
19746 33 0.16
>00276
Length = 1330
Score = 613 bits (1582), Expect = e-176, Method: Compositional matrix adjust.
Identities = 286/353 (81%), Positives = 319/353 (90%)
Frame = -3
Query: 80 TGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLALDRIRKLADNCTGLQGFLVFN 139
TGTYRQL PEQL++GKEDAANN+ARGHYTIGKE+VDL LDRIRKLAD CTGLQGFL+F+
Sbjct: 1328 TGTYRQL-SPEQLVTGKEDAANNYARGHYTIGKELVDLVLDRIRKLADQCTGLQGFLIFH 1152
Query: 140 AVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTD 199
+ VDYGKKSKL F +YP+PQVSTAVVEPYNS+L+TH+ LEH+D
Sbjct: 1151 SFGGGTGSGFTSLXMERLSVDYGKKSKLEFXIYPAPQVSTAVVEPYNSILTTHTTLEHSD 972
Query: 200 VAVMLDNEAIYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNL 259
A M+DNEAIYDICRR+LDIERPTYTNLNRLI Q++SS+TASLRFDGALNVD+TEFQTNL
Sbjct: 971 CAFMVDNEAIYDICRRNLDIERPTYTNLNRLIXQIVSSITASLRFDGALNVDLTEFQTNL 792
Query: 260 VPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNAAFEPASMMVKCDPRHGKYMACCLMY 319
VPYPRIHF L++YAP+ISAEKAYHEQL VAEITNA FEPA+ +VKCDPRHGKYMACC++Y
Sbjct: 791 VPYPRIHFPLATYAPVISAEKAYHEQLXVAEITNACFEPANQLVKCDPRHGKYMACCMLY 612
Query: 320 RGDVVPKDVNASVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIS 379
RGDVVPKDVNA++ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+S
Sbjct: 611 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 432
Query: 380 NSTAIGEIFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDF 432
N+TAI E ++RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD+
Sbjct: 431 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 273
>12457
Length = 781
Score = 397 bits (1021), Expect(2) = e-115, Method: Compositional matrix adjust.
Identities = 186/241 (77%), Positives = 210/241 (87%)
Frame = -1
Query: 65 CIFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLALDRIRK 124
C +DLEPTVVDEVRTGTYRQLFHPEQL++GKEDAANN+ARGHYTIGKEIVDL LDRIRK
Sbjct: 724 CRLVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLDRIRK 545
Query: 125 LADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTAVVEP 184
LAD CTGLQGFL+F++ VDYGKKSKL F +YP+PQVSTAVVEP
Sbjct: 544 LADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 365
Query: 185 YNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRF 244
YNS+L+TH+ LEH+D A M+DNEAIYDICRR+LDIERPTYTNLNRLI Q++SS+TASLRF
Sbjct: 364 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 185
Query: 245 DGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNAAFEPASMMVK 304
DGALNVD+TEFQTNLVPYPRIHF L++YAP+ISAEKAYHEQL+VAEITNA FEPA+ MVK
Sbjct: 184 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVK 5
Query: 305 C 305
C
Sbjct: 4 C 2
Score = 35.0 bits (79), Expect(2) = e-115, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -2
Query: 45 GDDAFNTFFSETGAGKHVPRCIFLDLEP 72
GDD+F T SETGAGKHVPR + P
Sbjct: 780 GDDSF-TPLSETGAGKHVPRAVSSXXSP 700
>06360
Length = 1896
Score = 304 bits (779), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 139/178 (78%), Positives = 154/178 (86%)
Frame = -1
Query: 1 MREVISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGK 60
MRE IS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKTIGGGDD+FNTFFSETGAGK
Sbjct: 1710 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 1531
Query: 61 HVPRCIFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLALD 120
HVPR +F+DLEPTVVDEVRTGTYRQLFHPEQL++GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 1530 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLD 1351
Query: 121 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVS 178
RIRKLAD CTGLQGFL+F++ VDYGKKSKL F +YP+PQVS
Sbjct: 1350 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVS 1177
>03702
Length = 1932
Score = 237 bits (604), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 113/150 (75%), Positives = 132/150 (88%), Gaps = 1/150 (0%)
Frame = +1
Query: 159 VDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLD 218
VDYGKKSKL F +YP+PQVSTAVVEPYNS+L+TH+ LEH+D A M+DNEAIYDICRR+LD
Sbjct: 1471 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 1650
Query: 219 IERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSY-APIIS 277
IERP YTNLNRLI Q++SS+TASLRFDGALNVD+TEFQTNLVP P H + + P+IS
Sbjct: 1651 IERPXYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPTP--HPLPPGHLCPVIS 1824
Query: 278 AEKAYHEQLSVAEITNAAFEPASMMVKCDP 307
AEKAYHEQL+VAE+TNA FEPA+ +VKCDP
Sbjct: 1825 AEKAYHEQLTVAEVTNACFEPANQLVKCDP 1914
>17215
Length = 632
Score = 231 bits (588), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 104/116 (89%), Positives = 113/116 (97%)
Frame = +3
Query: 317 LMYRGDVVPKDVNASVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 376
++YRGDVVPKDVNA++ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVC
Sbjct: 3 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 182
Query: 377 MISNSTAIGEIFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDF 432
M+SN+TAI E ++RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD+
Sbjct: 183 MLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 350
>16482
Length = 837
Score = 206 bits (525), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 148/248 (59%)
Frame = +1
Query: 1 MREVISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGK 60
MRE++ + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 100 MREIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 273
Query: 61 HVPRCIFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLALD 120
+VPR + +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 274 YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 453
Query: 121 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTA 180
+RK A++C LQGF + +++ +Y + F+V PSP+VS
Sbjct: 454 VVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 633
Query: 181 VVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLIAQVISSLTA 240
VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN L++ +S +T
Sbjct: 634 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 813
Query: 241 SLRFDGAL 248
LRF G L
Sbjct: 814 CLRFPGQL 837
>13181
Length = 1092
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 132/223 (59%)
Frame = -3
Query: 210 YDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFML 269
YDIC R+L + PTY +LN L++ +S +T LRF G LN D+ + N+VP+PR+HF +
Sbjct: 1090 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 911
Query: 270 SSYAPIISAEKAYHEQLSVAEITNAAFEPASMMVKCDPRHGKYMACCLMYRGDVVPKDVN 329
+AP+ S + L+V E+T F+ +MM CDPRHG+Y+ M+RG + K+V+
Sbjct: 910 PGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVD 731
Query: 330 ASVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIGEIFS 389
+ ++ K + FV+W P K + PP ++ + + NSTAI E+F
Sbjct: 730 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFVGNSTAIQELFK 575
Query: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDF 432
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L ++
Sbjct: 574 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 446
>04882
Length = 1136
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 125/214 (58%)
Frame = +2
Query: 219 IERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISA 278
+ PTY +LN L++ +S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S
Sbjct: 314 VHTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR 493
Query: 279 EKAYHEQLSVAEITNAAFEPASMMVKCDPRHGKYMACCLMYRGDVVPKDVNASVATIKTK 338
+ L+V E+T F+ +MM CDPRHG+Y+ ++RG + K+V+ + ++ K
Sbjct: 494 GSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNK 673
Query: 339 RTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIGEIFSRLDHKFDLM 398
+ FV+W P K + PP ++ + I NSTAI E+F R+ +F M
Sbjct: 674 NSSYFVEWIPNNVKTAVCDIPPR--------GLKMSATFIGNSTAIQELFKRISEQFTAM 829
Query: 399 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDF 432
+ ++AF+HWY GEGM+E EF+EA ++ L ++
Sbjct: 830 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 931
>05902
Length = 1127
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 156/281 (55%), Gaps = 9/281 (3%)
Frame = +2
Query: 161 YGKKSKLGFTVYPS-PQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDI 219
+ KK ++V+P+ ++S VV+PYNS+L+ L ++ D V+LDN A+ I L I
Sbjct: 89 FPKKLIQTYSVFPNVDEISDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIAADRLHI 268
Query: 220 ERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIIS-A 278
+ PT+ +N+L++ V+S+ T +LR+ G +N D+ +L+P PR+HF+++ Y P+ + +
Sbjct: 269 DTPTFAQVNQLVSTVMSTSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDS 448
Query: 279 EKAYHEQLSVAEITNAAFEPASMMVKCDPRHGK----YMACCLMYRGDVVPKDVNASVAT 334
+ A + +V ++ +P +MMV P H + Y++ + +G+V P V+ S+
Sbjct: 449 QVANVRKTTVLDVMRRLLQPKNMMVST-PVHRQANHCYISILNIIQGEVDPTQVHKSLQR 625
Query: 335 IKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIGEIFSRLDHK 394
I+ ++ QF+ W P + ++ + P V ++ + M++N T+I +F R+ +
Sbjct: 626 IRERKLAQFIPWGPASIQVALSRKSPYVQTAHRVSGL-----MLANHTSISHLFERILRQ 790
Query: 395 FDLMYAKRAFVHWYVGEGMEE---GEFSEAREDLAALEKDF 432
+D + + AF+ + E + + EF +RE L L ++
Sbjct: 791 YDKLRKREAFMDQFKKEAIFKDNLDEFDNSREALQLLVDEY 913
>25015
Length = 458
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 76/121 (62%)
Frame = -3
Query: 21 WELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRCIFLDLEPTVVDEVRT 80
WE+ EHGI P G D + + N +++E GK+VPR + +DLEP +D VR+
Sbjct: 360 WEVISDEHGIDPTGTYHGDSDLQ--LERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRS 187
Query: 81 GTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLALDRIRKLADNCTGLQGFLVFNA 140
G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK A++C LQGF + ++
Sbjct: 186 GPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHS 7
Query: 141 V 141
+
Sbjct: 6 L 4
>28905
Length = 425
Score = 99.0 bits (245), Expect = 3e-21, Method: Composition-based stats.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 1/134 (0%)
Frame = -1
Query: 258 NLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNAAFEPASMMVKCDPRHGKYMACCL 317
N+VP+PR+HF + +AP+ S + L+V E+T F+ +MM CDPRHG+Y+
Sbjct: 380 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 201
Query: 318 MYRGDVVPKDVNASVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM 377
M+RG + K+V+ + ++ K + FV+W P K + PP ++ +
Sbjct: 200 MFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMSGTF 45
Query: 378 ISNSTAI-GEIFSR 390
I NSTAI G +F R
Sbjct: 44 IGNSTAIQGRLFKR 3
>39157
Length = 488
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Frame = -1
Query: 1 MREVISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGK 60
MRE++ + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 443 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ--LERINVYYNEATGGK 270
Query: 61 HVPRCIFLDLEPTVVDEVRTGT--YRQLFHPEQLISGKEDAANNFARGHYTI-GKEIVDL 117
+VPR + +DLEP +D VR+G+ ++F P+ + G+ A NN+ + T G E+VD
Sbjct: 269 YVPRAVLVDLEPGTMDSVRSGSPFGPKIFRPDNFVFGQSGAGNNWGQKDTTQRGAELVDS 90
Query: 118 ALDRIRK 124
LD +RK
Sbjct: 89 VLDVVRK 69
>31457
Length = 1530
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 68/122 (55%)
Frame = +3
Query: 311 KYMACCLMYRGDVVPKDVNASVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAK 370
KY+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 234 KYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------G 389
Query: 371 VQRAVCMISNSTAIGEIFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
++ + I NSTAI E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 390 LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 569
Query: 431 DF 432
++
Sbjct: 570 EY 575
>19746
Length = 446
Score = 33.5 bits (75), Expect = 0.16, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 372 QRAVCMISNSTAIGEIFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 421
+++ ++SNS + + K M+A RA++H YV G+ E +F +A
Sbjct: 130 EKSATLVSNSRSSTRPLDDIMEKAWKMFASRAYIHQYVKRGLSEEDFLDA 279
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158279837|gb|EDP05596.1| T-complex protein 1, gamma
subunit [Chlamydomonas reinhardtii]
(555 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29631 263 e-145
01159 257 9e-69
05356 104 2e-44
09900 146 2e-35
12796 130 2e-30
06409 129 5e-30
17249 120 1e-27
33770 115 4e-26
29864 99 6e-21
30661 56 4e-08
02673 56 5e-08
10291 31 1.1
30501 29 5.2
>29631
Length = 1257
Score = 263 bits (673), Expect(3) = e-145, Method: Compositional matrix adjust.
Identities = 124/201 (61%), Positives = 159/201 (79%)
Frame = +1
Query: 155 NSCIGTKFTHRFGTLMAELALDAVEIVTVNHGDHKEIDIKNYAKVEKIPGGQIEDCRVLK 214
SC+GTKF ++ L ++ALDA V + KEIDIK YAKVEKIPGG +E+ VLK
Sbjct: 457 QSCLGTKFISKWMDLACQIALDATTTVFMEENGRKEIDIKRYAKVEKIPGGTMEESEVLK 636
Query: 215 GVMFNKDVVVPGRMRRRIENPRILLLDCPLEYKKGENQTNVELSKEEDWAALLKQEEEQI 274
G+ NKDVV +M+RRIENPRI+LLDC LEYKKGE+ TN+E+SKEED+A +L+ EEE I
Sbjct: 637 GIXVNKDVV-HXKMKRRIENPRIMLLDCNLEYKKGESATNIEISKEEDFAKILQLEEEYI 813
Query: 275 QRQCEHILAFKPDVVVTEKGLSDLAAHYLTKAGVSAIRRLRKTDNNRIARACGATIVNRT 334
++ C+ I+A KPD+V+TEKG+SDLA H+L KAG+S +RR+RKTDNNRIARACGATI NRT
Sbjct: 814 RKMCDEIIALKPDLVITEKGVSDLAQHFLLKAGISVLRRVRKTDNNRIARACGATIANRT 993
Query: 335 DEIKESDIGTGAGLFECVKIG 355
DE+KE D+G+G GL +C ++
Sbjct: 994 DELKEEDMGSGCGLLKCARLA 1056
Score = 177 bits (449), Expect(3) = e-145, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 115/159 (72%), Gaps = 1/159 (0%)
Frame = +3
Query: 5 VTVLNANTKRETGXXXXXXXXXXXXXXXXXXRTTLGPRSMLKMLLDPNGGIVLTNDGHAI 64
+ VLN NT+RE+G RT LGP+SMLKML+DP GGIV+TNDG+AI
Sbjct: 3 IIVLNQNTRRESGRKVQLGNIAAGKTIADVIRTCLGPKSMLKMLMDPMGGIVMTNDGNAI 182
Query: 65 LREIDVSHPAAKSMIQLSRTQDEEVGDGTTSVIILAGEMLHMAEPFLEKNIHPTVIVRGF 124
LREI+V HPAAKSMI+++RTQDEE GDGT SVIILAGE+L +AE FLE+ +HPTVI+ +
Sbjct: 183 LREINVQHPAAKSMIEVARTQDEETGDGTKSVIILAGEVLSVAEQFLEQQMHPTVIIAAY 362
Query: 125 AKALEDSVKII-DELAFPIDTNDRKHMMNVVNSCIGTKF 162
+ALED+++++ ++ PID +DR M+N+V G +
Sbjct: 363 RQALEDTLEVLRTKICTPIDISDRNQMLNIVTKLSGHQI 479
Score = 114 bits (285), Expect(3) = e-145, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 61/73 (83%)
Frame = +3
Query: 349 FECVKIGDEFFTFIVDCKAPKACTVLLRGASKDILNEVERNLTDAMGVARNICLDPRLVP 408
E KIGD++FTF+VDCK+PKACT+LLRGASKDIL EVERNL DAM VARN+ +DP L P
Sbjct: 1035 LEVRKIGDDYFTFLVDCKSPKACTILLRGASKDILAEVERNLQDAMNVARNVMIDPHLCP 1214
Query: 409 GGGACEMAVSHGL 421
GGGA EMA++ L
Sbjct: 1215 GGGASEMALAQAL 1253
>01159
Length = 2613
Score = 257 bits (656), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 161/490 (32%), Positives = 281/490 (57%), Gaps = 4/490 (0%)
Frame = +3
Query: 36 RTTLGPRSMLKMLLDPNGGIVLTNDGHAILREIDVSHPAAKSMIQLSRTQDEEVGDGTTS 95
+T+LGP+ + KM++ +G + +TNDG IL +DV H AK M+QLS++QD+E+GDGTT
Sbjct: 237 KTSLGPKGLDKMMVSGDGDVTVTNDGATILDMMDVDHQIAKLMVQLSKSQDDEIGDGTTG 416
Query: 96 VIILAGEMLHMAEPFLEKNIHPTVIVRGFAKALEDSVKIIDELA--FPIDTNDRKHMMNV 153
V++LAG +L AE L++ IHP I G+ A + +V+ +D+++ + +D + + ++ +
Sbjct: 417 VVVLAGALLEQAEKLLDRGIHPIRIADGYEIAAKCAVETLDKISDNYEVDLKNAEPLIKL 596
Query: 154 VNSCIGTKFTHRFGTLMAELALDAVEIVTVNHGDHKEIDIKNYAKVEKIPGGQIEDCRVL 213
+ +G+K +R MA++A+DA I++V K++D + KVE GG++ED ++
Sbjct: 597 AMTTLGSKIVNRCHRQMAKIAVDA--IMSVADLKRKDVDFE-LIKVEGKVGGKLEDTMLV 767
Query: 214 KGVMFNKDVVVPGRMRRRIENPRILLLDCPLEYKKGENQTNVELSKEEDWAALLKQEEEQ 273
KGV+ +KD+ P +M + +++ +I +L CP E K + + ++++ ED+ L + E +
Sbjct: 768 KGVVVDKDMSHP-QMPKVVKDAKIAILTCPFEPPKPKTKHKLDITSVEDYKKLREYELNK 944
Query: 274 IQRQCEHILAFKPDVVVTEKGLSDLAAHYLTKAGVSAIRRLRKTDNNRIARACGATIVNR 333
+ + + ++V+ + G D A H L + + A+R + + IA A G IV R
Sbjct: 945 FESMVQSVKDKGANLVICQWGFDDEANHLLLQRELPAVRWVGGPEIELIAIATGGRIVPR 1124
Query: 334 TDEIKESDIGTGAGLFECVKIG--DEFFTFIVDCKAPKACTVLLRGASKDILNEVERNLT 391
+E+ +G AG+ + G + I +C +A T+ +RG +K I+ E +R+L
Sbjct: 1125FEELTTEKLGK-AGIVRELTFGTTKDRMLVIEECLNTRAVTIFIRGGNKMIVEEAKRSLH 1301
Query: 392 DAMGVARNICLDPRLVPGGGACEMAVSHGLAMRAATVEGVESWPYKAVGVAMEVIPRTLA 451
DA+ V RN+ D R+V GGGA E+A S +A A + +E + ++ A+E +P LA
Sbjct: 1302DALCVIRNLVRDNRVVYGGGAPEIAASVAVAEAADKISTLEQYAVRSFSEALEAVPLALA 1481
Query: 452 QNCGANVIRTLTKLRAKHAESAACCWGIDGESGEVKDMKELGVWEPYQVKAQTIKTAVES 511
+N G I+TL +++++ + GID DMKE V E K Q I A +
Sbjct: 1482ENSGLAPIQTLAEVKSRQVKEKNPRLGIDCLLKGTNDMKEQNVIETLTAKKQQILLATQL 1661
Query: 512 AQMLLRIDDI 521
+M+L+IDDI
Sbjct: 1662VRMILKIDDI 1691
>05356
Length = 2339
Score = 104 bits (259), Expect(2) = 2e-44, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 117/230 (50%), Gaps = 2/230 (0%)
Frame = +1
Query: 295 LSDLAAHYLTKAGVSAIRRLRKTDNNRIARACGATIVNRTDEIKESDIGTGAGLFECVKI 354
+ DLA HY K V IR L K D R+ ++ AT + + + + G L +I
Sbjct: 1078 VGDLAQHYCNKYKVMVIRLLSKWDLRRLCKSICATALPKVTTPRNEECGY-CDLVYVDEI 1254
Query: 355 GDE-FFTFIVDCKAPKACTVLLRGASKDILNEVERNLTDAMGVARNICLDPRLVPGGGAC 413
G+ F + TV++RG++ +I++++ER L D + + + D RLVPG GA
Sbjct: 1255 GETPVVIFQQNKDESPITTVIIRGSTDNIMDDIERALDDGVNTFKALTKDDRLVPGAGAT 1434
Query: 414 EMAVSHGLAMRAATVEGVESWPYKAVGVAMEVIPRTLAQNCGANVIRTLTKLRAKHAESA 473
E+ ++ + ++ G+E + K ++EVIPR LA+N G L+KL A H E
Sbjct: 1435 EIELAKQITTYGESLPGLEQYAVKKFAESLEVIPRALAENTGMKATDILSKLYAAHQEGQ 1614
Query: 474 ACCWGID-GESGEVKDMKELGVWEPYQVKAQTIKTAVESAQMLLRIDDIV 522
G+D +SG V D K+ + + Y + +K A +A +LR+D I+
Sbjct: 1615 QNA-GVDIDDSGSVLDAKQANLTDLYLNRYWGLKFAAAAACTVLRVDQII 1761
Score = 93.6 bits (231), Expect(2) = 2e-44, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 130/259 (50%), Gaps = 4/259 (1%)
Frame = +2
Query: 36 RTTLGPRSMLKMLLDPNGGIVLTNDGHAILREIDVSHPAAKSMIQLSRTQDEEVGDGTTS 95
R+ GP KM+++ + +TND ILRE++V HPAAK ++ + Q++E GDGT
Sbjct: 320 RSAYGPHGQNKMVINHLEKLFVTNDAATILRELEVQHPAAKMLVLAAHQQEQECGDGTNF 499
Query: 96 VIILAGEMLHMAEPFLEKNIHPTVIVRGFAKALEDSVKIIDELAFPIDTNDRKHMMNVVN 155
V++ AG +L AE L + T ++ G+ AL+ + +I+ +L N R V
Sbjct: 500 VLVFAGALLENAEQLLRMGLSVTEVIEGYELALKKAHEILPKLVIGHVKNLRNK--EEVK 673
Query: 156 SCIGTK-FTHRFGT--LMAELALDA-VEIVTVNHGDHKEIDIKNYAKVEKIPGGQIEDCR 211
+ I T + ++G +A+L DA V ++ + N +V KI G +
Sbjct: 674 TAIRTSVMSKQYGNEDFLADLITDACVSVLPAKIS----FSVDN-VRVCKILGCGLLQSS 838
Query: 212 VLKGVMFNKDVVVPGRMRRRIENPRILLLDCPLEYKKGENQTNVELSKEEDWAALLKQEE 271
++G++F + V G + ++E ++ + CPL+ + E + V + E+ + K EE
Sbjct: 839 TIQGMVFKRQ--VEGEI-TKVEKAKVAVFTCPLDSMQTETKGTVLIKNAEELMSFSKGEE 1009
Query: 272 EQIQRQCEHILAFKPDVVV 290
+ ++ Q + I +V+V
Sbjct: 1010DMMEEQIKGIKEAGVNVIV 1066
>09900
Length = 1305
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 149/303 (49%)
Frame = +3
Query: 235 PRILLLDCPLEYKKGENQTNVELSKEEDWAALLKQEEEQIQRQCEHILAFKPDVVVTEKG 294
PRI LL+ LE K + V + +++ +++ E + + + + I VV+++
Sbjct: 57 PRIALLNIELELKSERDNAEVRVDNVQEYQSIVDAEWKILYDKLDKIHQSGAKVVLSKLP 236
Query: 295 LSDLAAHYLTKAGVSAIRRLRKTDNNRIARACGATIVNRTDEIKESDIGTGAGLFECVKI 354
+ D+A Y + R+ + D R +ACG +I + +GT LF+ ++I
Sbjct: 237 IGDVATQYFADRDMFCAGRVPEEDLRRTMKACGGSIQTTVQSLTPDVLGT-CQLFDEIQI 413
Query: 355 GDEFFTFIVDCKAPKACTVLLRGASKDILNEVERNLTDAMGVARNICLDPRLVPGGGACE 414
G E F C + CT++LRG ++ + E ER+L DA+ + R + +V GGGA E
Sbjct: 414 GGERFNMFKGCTMARTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIE 593
Query: 415 MAVSHGLAMRAATVEGVESWPYKAVGVAMEVIPRTLAQNCGANVIRTLTKLRAKHAESAA 474
M VS+ L + T+ G E A A+EVIPR L N G + L KLR KHA+
Sbjct: 594 MEVSYHLREHSHTIAGKEQLLMSAYAKALEVIPRQLCDNAGFDATNILNKLRQKHAQGGT 773
Query: 475 CCWGIDGESGEVKDMKELGVWEPYQVKAQTIKTAVESAQMLLRIDDIVSGLSKKDRGSGP 534
+G++ ++ D E VWEP VK + A E+ ++L +D+ + + +G P
Sbjct: 774 -WYGVNILREDIADNFEDCVWEPAVVKINALTAASEATALILSVDETIKN-PRSGQGDAP 947
Query: 535 RGG 537
G
Sbjct: 948 GAG 956
>12796
Length = 1316
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 176/345 (51%), Gaps = 9/345 (2%)
Frame = -3
Query: 191 IDIKNYAKVEKIPGGQIEDCRVLKGVMFNKDVVVPGRMRRRIENPRILLLDCPLEYKKGE 250
+D+KN KV + GG +ED ++ G++F +RIE +I L+ + K +
Sbjct: 1308 VDLKNI-KVIRSLGGTVEDTELVNGLVFTSRSA-GTNAPKRIEKAKIGLIQFCISAPKTD 1135
Query: 251 NQTNVELSKEEDWAAL---LKQEEEQIQRQCEHILAFKPDVVVTEKGL-----SDLAAHY 302
NV +S D+AA+ LK+E I + I +V++ +K + SDLA H+
Sbjct: 1134 MDHNVIVS---DYAAMDRVLKEERSYILNIVKQIKKAGCNVLLVQKSILRDAVSDLAQHF 964
Query: 303 LTKAGVSAIRRLRKTDNNRIARACGATIVNRTDEIKESDIGTGAGLFECVKIGDEFFTFI 362
L K ++ + + D + + + D ++ + A L E V G F I
Sbjct: 963 LDKIKCLVVKDVEREDIEFVCKTLHCRPIASLDHFTAENMSS-ADLVEEVASGTNKFVKI 787
Query: 363 VDCKAP-KACTVLLRGASKDILNEVERNLTDAMGVARNICLDPRLVPGGGACEMAVSHGL 421
+ + +++ RG++K +L E R+L DA+ V R + + + GGGA E+ ++ L
Sbjct: 786 TGIQNQGRTVSIICRGSNKLVLEEAARSLHDALCVVRCLVRNRAQIVGGGAPEIEMALQL 607
Query: 422 AMRAATVEGVESWPYKAVGVAMEVIPRTLAQNCGANVIRTLTKLRAKHAESAACCWGIDG 481
A A TV+GV+++ Y+A A+EVIP TLA+N G N I T+T+LR +HA+ GI+
Sbjct: 606 AAAAQTVDGVDAYCYRAFADALEVIPSTLAENAGLNPIATVTELRNRHAQGEK-NAGINV 430
Query: 482 ESGEVKDMKELGVWEPYQVKAQTIKTAVESAQMLLRIDDIVSGLS 526
G + D+ V +P V I A E+ + +L+IDDIV+ S
Sbjct: 429 RKGAITDIFAENVVQPLLVSTSAITLATETVRSILKIDDIVNTYS 295
>06409
Length = 1533
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 151/299 (50%), Gaps = 6/299 (2%)
Frame = -3
Query: 231 RIENPRILLLDCPLEYKKGENQTNVELSKEEDWAALLKQEEEQIQRQCEHILAFKPDVVV 290
++E +I + + K + + V +S +L++E I + I +V++
Sbjct: 1495 KVEKAKIGFIQFCISPPKTDMENQVIVSDYTQMDRVLREERNYILDIVKKIKKAGCNVLL 1316
Query: 291 TEKGL-----SDLAAHYLTKAGVSAIRRLRKTDNNRIARACGATIVNRTDEIKESDIGTG 345
+K + SDLA H+L K + ++ + + D + + G V D ++G+
Sbjct: 1315 IQKSILRDAVSDLALHFLAKMKIMVVKDIEREDVEFVCKTLGCRPVASLDHFLPENLGS- 1139
Query: 346 AGLFECVKIGDEFFTFIVDCKAP-KACTVLLRGASKDILNEVERNLTDAMGVARNICLDP 404
A L E V+ G P + TVL+RG++K +L E +R+L DA+ V R +
Sbjct: 1138 ADLIEEVQTGSSKIVKATGIANPGQTVTVLIRGSNKLVLEEADRSLHDALCVIRCLVKKK 959
Query: 405 RLVPGGGACEMAVSHGLAMRAATVEGVESWPYKAVGVAMEVIPRTLAQNCGANVIRTLTK 464
L+ GGGA E +S LA A T+ G+E + ++A A+EVIP TLA+N G N I T+T
Sbjct: 958 ALIAGGGAPETEMSMRLAAYANTLAGMEQYCFRAFAEALEVIPFTLAENAGLNPISTVTX 779
Query: 465 LRAKHAESAACCWGIDGESGEVKDMKELGVWEPYQVKAQTIKTAVESAQMLLRIDDIVS 523
LR +HA+ GI+ G + ++ E V +P V I A E+ + +L+IDDIV+
Sbjct: 778 LRTRHAQGERTA-GINVRKGAITNILEENVLQPLLVSTSAITLASETVRSILKIDDIVN 605
>17249
Length = 909
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 64/88 (72%)
Frame = +3
Query: 442 AMEVIPRTLAQNCGANVIRTLTKLRAKHAESAACCWGIDGESGEVKDMKELGVWEPYQVK 501
A+EVI RTL QNCGAN IRTLT LRAKHA+ WGIDG +G + DM E G+WEP VK
Sbjct: 12 ALEVISRTLIQNCGANTIRTLTALRAKHAQGQKNTWGIDGNTGNIVDMAEFGIWEPLSVK 191
Query: 502 AQTIKTAVESAQMLLRIDDIVSGLSKKD 529
Q KTA E+A +LLRIDDIVSG K D
Sbjct: 192 LQVYKTACETAILLLRIDDIVSGTKKMD 275
>33770
Length = 484
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 106/163 (65%)
Frame = +1
Query: 46 KMLLDPNGGIVLTNDGHAILREIDVSHPAAKSMIQLSRTQDEEVGDGTTSVIILAGEMLH 105
KM+ NG + +TNDG IL+++ V HPAAK +++LS+ QD E GDGTT+V++LAG +L
Sbjct: 1 KMIQAANGDVTITNDGATILKQMQVLHPAAKMLVELSKAQDIEXGDGTTTVVVLAGSLLD 180
Query: 106 MAEPFLEKNIHPTVIVRGFAKALEDSVKIIDELAFPIDTNDRKHMMNVVNSCIGTKFTHR 165
+ L K IHPT+I F KA V+++D + P++ +DR+ +++ ++ + +K +
Sbjct: 181 ASAKLLAKGIHPTMISEAFQKAASKCVELLDGMVKPLELSDRESLLSSASTSLNSKVVSQ 360
Query: 166 FGTLMAELALDAVEIVTVNHGDHKEIDIKNYAKVEKIPGGQIE 208
+ +++A +A+DAV + ++ +D+K+ ++K+ GG I+
Sbjct: 361 YSSMLAPIAVDAV-LKVIDPATATNVDLKDIKIIKKL-GGTID 483
>29864
Length = 1026
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 116/215 (53%)
Frame = +1
Query: 36 RTTLGPRSMLKMLLDPNGGIVLTNDGHAILREIDVSHPAAKSMIQLSRTQDEEVGDGTTS 95
R+ LGP+ +KML+ G I LT DG+ +L E+ + HP A + +++ QD+ GDGTTS
Sbjct: 211 RSNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIARVATAQDDITGDGTTS 390
Query: 96 VIILAGEMLHMAEPFLEKNIHPTVIVRGFAKALEDSVKIIDELAFPIDTNDRKHMMNVVN 155
+++ GE+L A+ ++ + +HP +I GF A ++++++E+ + DR+ ++ V
Sbjct: 391 NVLIIGELLKQADLYIAEGLHPRLITEGFELARNKALEVLEEVKVKREV-DRETLVQVAR 567
Query: 156 SCIGTKFTHRFGTLMAELALDAVEIVTVNHGDHKEIDIKNYAKVEKIPGGQIEDCRVLKG 215
+ + TK L+ E +DAV + + ID+ +E + D +++G
Sbjct: 568 TSLRTKVHTELADLLTEHVVDAVLAI---QXPGEGIDLHMVELMEMQHKTDL-DSTLVRG 735
Query: 216 VMFNKDVVVPGRMRRRIENPRILLLDCPLEYKKGE 250
++ + P M++ ++ IL + LEY+K E
Sbjct: 736 LVMDHGARHPD-MKKHTKDAFILTCNVSLEYEKTE 837
>30661
Length = 380
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%)
Frame = +3
Query: 327 GATIVNRTDEIKESDIGTGAGLFECVKIGDEFFTFIVDCKAPKACTVLLRGASKDILNEV 386
G I + D +++ +G L E V IG++ +ACT++LRGA++ IL+E
Sbjct: 30 GGEITSTFDCPEKTKLGQ-CDLIEEVMIGEDKLIKFSGVALGEACTIVLRGATQQILDEA 206
Query: 387 ERNLTDAMGVARNICLDPRLVPGGGACEMAVSHGLAMRAATVEGVESWPYKAVGVAMEVI 446
R+L DA+ V + R V GGG EM ++ ++ AA G E+ +AME +
Sbjct: 207 XRSLHDALCVLSQTVKETRTVYGGGCSEMLMAEAVSQLAAKTPGKEA-------IAMEAL 365
Query: 447 P 447
P
Sbjct: 366 P 368
>02673
Length = 1243
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 58/111 (52%)
Frame = +1
Query: 411 GACEMAVSHGLAMRAATVEGVESWPYKAVGVAMEVIPRTLAQNCGANVIRTLTKLRAKHA 470
GA E+A S +A A + +E + ++ A+E +P LA+N G I+TL +++++
Sbjct: 1 GAPEIAASVAVAEAADKISTLEQYAVRSFSEALEAVPLALAENSGLAPIQTLAEVKSRQV 180
Query: 471 ESAACCWGIDGESGEVKDMKELGVWEPYQVKAQTIKTAVESAQMLLRIDDI 521
+ GID DMKE V E K Q I A + +M+L+IDDI
Sbjct: 181 KEKNPRLGIDCLLKGTNDMKEQNVIETLTAKKQQILLATQLVRMILKIDDI 333
>10291
Length = 1066
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 488 DMKELGVWEPYQVKAQTIKTAVESAQMLLRIDDI 521
DMKE V E K Q I A + +M+L+IDDI
Sbjct: 37 DMKEQNVIETLTAKKQQILLATQLVRMILKIDDI 138
>30501
Length = 638
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1
Query: 359 FTFIVDCKAPKACTVLLRGASKDILNEVERNLTDAMGVARNI 400
F IV + ACTV L ASK N NLT+ +RN+
Sbjct: 215 FELIVAAQEIAACTVQLVIASKVKANRNSENLTNLTAASRNV 90
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158277164|gb|EDP02933.1| beta tubulin 2
[Chlamydomonas reinhardtii]
(443 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
16482 449 e-126
13181 438 e-123
04882 414 e-116
00276 278 5e-75
31457 243 1e-64
25015 242 2e-64
28905 237 1e-63
39157 222 7e-63
12457 211 3e-55
05902 159 1e-39
06360 144 5e-35
03702 114 6e-26
17215 82 3e-16
29025 40 0.002
19746 39 0.003
20906 30 1.5
>16482
Length = 837
Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust.
Identities = 208/246 (84%), Positives = 223/246 (90%)
Frame = +1
Query: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQLERINVYFNEATGGRYV 60
MREIVH+Q GQCGNQIGAKFWEV+SDEHGIDPTGTYHGDSDLQLERINVY+NEATGG+YV
Sbjct: 100 MREIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 279
Query: 61 PRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVV 120
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 280 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 459
Query: 121 RKEAESCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVVPSPKVSDTVV 180
RKEAESCDCLQGFQ+ H ISKIREEYPDR+M TFSVVPSPKVSDTVV
Sbjct: 460 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 639
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGITCCL 240
EPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTPT+GDLNHL+SA MSG+T CL
Sbjct: 640 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 819
Query: 241 RFPGQL 246
RFPGQL
Sbjct: 820 RFPGQL 837
>13181
Length = 1092
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 200/223 (89%), Positives = 215/223 (96%)
Frame = -3
Query: 208 YDICFRTLKLTTPTFGDLNHLISAVMSGITCCLRFPGQLNADLRKLAVNLIPFPRLHFFM 267
YDICFRTLKLTTPT+GDLNHL+SA MSG+T CLRFPGQLNADLRKLAVN++PFPRLHFFM
Sbjct: 1090 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 911
Query: 268 VGFTPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASALFRGRMSTKEVD 327
GF PLTSRGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRGRMS KEVD
Sbjct: 910 PGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVD 731
Query: 328 EQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSATFIGNSTAIQEMFKRVSEQFTA 387
EQMLNVQNKNSSYFVEWIPNNVK++VCDIPP+GLKMSATF+GNSTAIQE+FKR+SEQFTA
Sbjct: 730 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFVGNSTAIQELFKRISEQFTA 551
Query: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASA 430
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA+A
Sbjct: 550 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 422
>04882
Length = 1136
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 192/230 (83%), Positives = 213/230 (92%)
Frame = +2
Query: 201 VLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGITCCLRFPGQLNADLRKLAVNLIPF 260
+L +E + F+ + + TPT+GDLNHL+SA MSG+T CLRFPGQLNADLRKLAVN++PF
Sbjct: 269 MLKHEGAFHQVFK-I*VHTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPF 445
Query: 261 PRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASALFRGR 320
PRLHFFM GF PLTSRGSQQYRALTVPELTQQM+D+KNMM A DPRHGRYLT +A+FRGR
Sbjct: 446 PRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGR 625
Query: 321 MSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSATFIGNSTAIQEMFKR 380
MS KEVDEQMLNVQNKNSSYFVEWIPNNVK++VCDIPP+GLKMSATFIGNSTAIQE+FKR
Sbjct: 626 MSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKR 805
Query: 381 VSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASA 430
+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA+A
Sbjct: 806 ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 955
>00276
Length = 1330
Score = 278 bits (710), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 132/355 (37%), Positives = 206/355 (58%), Gaps = 8/355 (2%)
Frame = -3
Query: 78 SGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQVCH 137
+G Y Q+ P+ V G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF + H
Sbjct: 1328 TGTYRQL-SPEQLVTGKEDAANNYARGHYTIGKELVDLVLDRIRKLADQCTGLQGFLIFH 1152
Query: 138 XXXXXXXXXXXXXXISKIREEYPDRMMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENAD 197
+ ++ +Y + L F + P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 1151 SFGGGTGSGFTSLXMERLSVDYGKKSKLEFXIYPAPQVSTAVVEPYNSILTTHTTLEHSD 972
Query: 198 ECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGITCCLRFPGQLNADLRKLAVNL 257
++DNEA+YDIC R L + PT+ +LN LI ++S IT LRF G LN DL + NL
Sbjct: 971 CAFMVDNEAIYDICRRNLDIERPTYTNLNRLIXQIVSSITASLRFDGALNVDLTEFQTNL 792
Query: 258 IPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASALF 317
+P+PR+HF + + P+ S + L V E+T ++ N + DPRHG+Y+ L+
Sbjct: 791 VPYPRIHFPLATYAPVISAEKAYHEQLXVAEITNACFEPANQLVKCDPRHGKYMACCMLY 612
Query: 318 RGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP--------KGLKMSATFIG 369
RG + K+V+ + ++ K + FV+W P K + PP ++ + +
Sbjct: 611 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 432
Query: 370 NSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 431 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 267
>31457
Length = 1530
Score = 243 bits (620), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 110/122 (90%), Positives = 120/122 (98%)
Frame = +3
Query: 309 RYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSATFI 368
+YLT +A+FRGRMS KEVDEQMLNVQNKNSSYFVEWIPNNVK++VCDIPP+GLKMS+TFI
Sbjct: 234 KYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFI 413
Query: 369 GNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 428
GNSTAIQE+FKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA
Sbjct: 414 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 593
Query: 429 SA 430
+A
Sbjct: 594 TA 599
>25015
Length = 458
Score = 242 bits (617), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 108/118 (91%), Positives = 117/118 (99%)
Frame = -3
Query: 20 FWEVVSDEHGIDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRSG 79
FWEV+SDEHGIDPTGTYHGDSDLQLERINVY+NEATGG+YVPRA+L+DLEPGTMDSVRSG
Sbjct: 363 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSG 184
Query: 80 PYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQVCH 137
P+GQIFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVVRKEAESCDCLQGFQ+ H
Sbjct: 183 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 10
>28905
Length = 425
Score = 237 bits (605), Expect(2) = 1e-63, Method: Compositional matrix adjust.
Identities = 110/129 (85%), Positives = 120/129 (93%), Gaps = 1/129 (0%)
Frame = -1
Query: 253 LAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLT 312
+AVN++PFPRLHFFM GF PLTSRGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT
Sbjct: 389 VAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 210
Query: 313 ASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSATFIGNST 372
+A+FRGRMS KEVDEQMLNVQNKNSSYFVEWIPNNVK++VCDIPP+GLKMS TFIGNST
Sbjct: 209 VAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSGTFIGNST 30
Query: 373 AIQ-EMFKR 380
AIQ +FKR
Sbjct: 29 AIQGRLFKR 3
Score = 23.9 bits (50), Expect(2) = 1e-63, Method: Composition-based stats.
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 242 FPGQLNADL 250
FPGQLNADL
Sbjct: 424 FPGQLNADL 398
>39157
Length = 488
Score = 222 bits (566), Expect(2) = 7e-63, Method: Compositional matrix adjust.
Identities = 105/127 (82%), Positives = 117/127 (92%), Gaps = 3/127 (2%)
Frame = -1
Query: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQLERINVYFNEATGGRYV 60
MREIVH+Q GQCGNQIGAKFWEV+SDEHGIDPTGTYHGDSDLQLERINVY+NEATGG+YV
Sbjct: 443 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 264
Query: 61 PRAILMDLEPGTMDSVRSG-PYG-QIFRPDNFVFGQTGAGNNWAKGHYTE-GAELIDSVL 117
PRA+L+DLEPGTMDSVRSG P+G +IFRPDNFVFGQ+GAGNNW + T+ GAEL+DSVL
Sbjct: 263 PRAVLVDLEPGTMDSVRSGSPFGPKIFRPDNFVFGQSGAGNNWGQKDTTQRGAELVDSVL 84
Query: 118 DVVRKEA 124
DVVRK
Sbjct: 83 DVVRKRG 63
Score = 37.0 bits (84), Expect(2) = 7e-63, Method: Compositional matrix adjust.
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -2
Query: 122 KEAESCDCLQGFQVCH 137
KEAESCDCLQGFQ+ H
Sbjct: 70 KEAESCDCLQGFQLTH 23
>12457
Length = 781
Score = 211 bits (538), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 144/236 (61%)
Frame = -1
Query: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
L+DLEP +D VR+G Y Q+F P+ V G+ A NN+A+GHYT G E++D VLD +RK A
Sbjct: 718 LVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 539
Query: 125 ESCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVVPSPKVSDTVVEPYN 184
+ C LQGF + H + ++ +Y + L F++ P+P+VS VVEPYN
Sbjct: 538 DQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 359
Query: 185 ATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGITCCLRFPG 244
+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN LI ++S IT LRF G
Sbjct: 358 SILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG 179
Query: 245 QLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
LN DL + NL+P+PR+HF + + P+ S + LTV E+T ++ N M
Sbjct: 178 ALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQM 11
>05902
Length = 1127
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 162/284 (57%), Gaps = 12/284 (4%)
Frame = +2
Query: 152 ISKIREEYPDRMMLTFSVVPS-PKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDI 210
+ K+ + +P +++ T+SV P+ ++SD VV+PYN+ L++ +L +NAD +VLDN AL I
Sbjct: 68 LEKLNDRFPKKLIQTYSVFPNVDEISDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRI 247
Query: 211 CFRTLKLTTPTFGDLNHLISAVMSGITCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGF 270
L + TPTF +N L+S VMS T LR+PG +N DL L +LIP PRLHF M G+
Sbjct: 248 AADRLHIDTPTFAQVNQLVSTVMSTSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGY 427
Query: 271 TPLTSRGS-QQYRALTVPELTQQMWDAKNMMCAADPRHGR----YLTASALFRGRMSTKE 325
TPLT+ R TV ++ +++ KNMM + P H + Y++ + +G + +
Sbjct: 428 TPLTTDSQVANVRKTTVLDVMRRLLQPKNMMVST-PVHRQANHCYISILNIIQGEVDPTQ 604
Query: 326 VDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP---KGLKMSATFIGNSTAIQEMFKRVS 382
V + + ++ + + F+ W P +++ ++ P ++S + N T+I +F+R+
Sbjct: 605 VHKSLQRIRERKLAQFIPWGPASIQVALSRKSPYVQTAHRVSGLMLANHTSISHLFERIL 784
Query: 383 EQFTAMFRRKAFLHWYTGEGM--DEM-EFTEAESNMNDLVSEYQ 423
Q+ + +R+AF+ + E + D + EF + + LV EYQ
Sbjct: 785 RQYDKLRKREAFMDQFKKEAIFKDNLDEFDNSREALQLLVDEYQ 916
>06360
Length = 1896
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 103/179 (57%), Gaps = 2/179 (1%)
Frame = -1
Query: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQL--ERINVYFNEATGGR 58
MRE + + GQ G Q+G WE+ EHGI P G D + + N +F+E G+
Sbjct: 1710 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 1531
Query: 59 YVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLD 118
+VPRA+ +DLEP +D VR+G Y Q+F P+ V G+ A NN+A+GHYT G E++D VLD
Sbjct: 1530 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLD 1351
Query: 119 VVRKEAESCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVVPSPKVSD 177
+RK A+ C LQGF + H + ++ +Y + L F++ P+P+VSD
Sbjct: 1350 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSD 1174
>03702
Length = 1932
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 88/153 (57%), Gaps = 1/153 (0%)
Frame = +1
Query: 154 KIREEYPDRMMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
++ +Y + L F++ P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R
Sbjct: 1462 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 1641
Query: 214 TLKLTTPTFGDLNHLISAVMSGITCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVG-FTP 272
L + P + +LN LI ++S IT LRF G LN DL + NL+P P H G P
Sbjct: 1642 NLDIERPXYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPTP--HPLPPGHLCP 1815
Query: 273 LTSRGSQQYRALTVPELTQQMWDAKNMMCAADP 305
+ S + LTV E+T ++ N + DP
Sbjct: 1816 VISAEKAYHEQLTVAEVTNACFEPANQLVKCDP 1914
>17215
Length = 632
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 66/117 (56%), Gaps = 8/117 (6%)
Frame = +3
Query: 316 LFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP--------KGLKMSATF 367
L+RG + K+V+ + ++ K + FV+W P K + PP ++ +
Sbjct: 6 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 185
Query: 368 IGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
+ N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 186 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 356
>29025
Length = 395
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -3
Query: 412 ESNMNDLVSEYQQYQDASA 430
ESNMNDLVSEYQQYQDA+A
Sbjct: 354 ESNMNDLVSEYQQYQDATA 298
>19746
Length = 446
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +1
Query: 339 SYFVEWIPNNVKSSVCDIPPK--GLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLH 396
S F W N+ +V + P + SAT + NS + + E+ MF +A++H
Sbjct: 55 SLFTLWTCPNMAFNVSNQPRAFCAYEKSATLVSNSRSSTRPLDDIMEKAWKMFASRAYIH 234
Query: 397 WYTGEGMDEMEFTEAESNMNDLVSEY 422
Y G+ E +F +A + +V+ Y
Sbjct: 235 QYVKRGLSEEDFLDAFVTLEQVVASY 312
>20906
Length = 408
Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 35 TYHGDSDLQLERINVYFNEATGGRYVPRAILM 66
TY DS + L ++ +FNE TG VPR I M
Sbjct: 2 TYQNDSFISLTVVHYHFNETTG**NVPRQIKM 97
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158277239|gb|EDP03008.1| beta tubulin 1
[Chlamydomonas reinhardtii]
(443 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
16482 449 e-126
13181 438 e-123
04882 414 e-116
00276 278 5e-75
31457 243 1e-64
25015 242 2e-64
28905 237 1e-63
39157 222 7e-63
12457 211 3e-55
05902 159 1e-39
06360 144 5e-35
03702 114 6e-26
17215 82 3e-16
29025 40 0.002
19746 39 0.003
20906 30 1.5
>16482
Length = 837
Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust.
Identities = 208/246 (84%), Positives = 223/246 (90%)
Frame = +1
Query: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQLERINVYFNEATGGRYV 60
MREIVH+Q GQCGNQIGAKFWEV+SDEHGIDPTGTYHGDSDLQLERINVY+NEATGG+YV
Sbjct: 100 MREIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 279
Query: 61 PRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVV 120
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 280 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 459
Query: 121 RKEAESCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVVPSPKVSDTVV 180
RKEAESCDCLQGFQ+ H ISKIREEYPDR+M TFSVVPSPKVSDTVV
Sbjct: 460 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 639
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGITCCL 240
EPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTPT+GDLNHL+SA MSG+T CL
Sbjct: 640 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 819
Query: 241 RFPGQL 246
RFPGQL
Sbjct: 820 RFPGQL 837
>13181
Length = 1092
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 200/223 (89%), Positives = 215/223 (96%)
Frame = -3
Query: 208 YDICFRTLKLTTPTFGDLNHLISAVMSGITCCLRFPGQLNADLRKLAVNLIPFPRLHFFM 267
YDICFRTLKLTTPT+GDLNHL+SA MSG+T CLRFPGQLNADLRKLAVN++PFPRLHFFM
Sbjct: 1090 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 911
Query: 268 VGFTPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASALFRGRMSTKEVD 327
GF PLTSRGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRGRMS KEVD
Sbjct: 910 PGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVD 731
Query: 328 EQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSATFIGNSTAIQEMFKRVSEQFTA 387
EQMLNVQNKNSSYFVEWIPNNVK++VCDIPP+GLKMSATF+GNSTAIQE+FKR+SEQFTA
Sbjct: 730 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFVGNSTAIQELFKRISEQFTA 551
Query: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASA 430
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA+A
Sbjct: 550 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 422
>04882
Length = 1136
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 192/230 (83%), Positives = 213/230 (92%)
Frame = +2
Query: 201 VLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGITCCLRFPGQLNADLRKLAVNLIPF 260
+L +E + F+ + + TPT+GDLNHL+SA MSG+T CLRFPGQLNADLRKLAVN++PF
Sbjct: 269 MLKHEGAFHQVFK-I*VHTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPF 445
Query: 261 PRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASALFRGR 320
PRLHFFM GF PLTSRGSQQYRALTVPELTQQM+D+KNMM A DPRHGRYLT +A+FRGR
Sbjct: 446 PRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGR 625
Query: 321 MSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSATFIGNSTAIQEMFKR 380
MS KEVDEQMLNVQNKNSSYFVEWIPNNVK++VCDIPP+GLKMSATFIGNSTAIQE+FKR
Sbjct: 626 MSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKR 805
Query: 381 VSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASA 430
+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA+A
Sbjct: 806 ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 955
>00276
Length = 1330
Score = 278 bits (710), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 132/355 (37%), Positives = 206/355 (58%), Gaps = 8/355 (2%)
Frame = -3
Query: 78 SGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQVCH 137
+G Y Q+ P+ V G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF + H
Sbjct: 1328 TGTYRQL-SPEQLVTGKEDAANNYARGHYTIGKELVDLVLDRIRKLADQCTGLQGFLIFH 1152
Query: 138 XXXXXXXXXXXXXXISKIREEYPDRMMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENAD 197
+ ++ +Y + L F + P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 1151 SFGGGTGSGFTSLXMERLSVDYGKKSKLEFXIYPAPQVSTAVVEPYNSILTTHTTLEHSD 972
Query: 198 ECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGITCCLRFPGQLNADLRKLAVNL 257
++DNEA+YDIC R L + PT+ +LN LI ++S IT LRF G LN DL + NL
Sbjct: 971 CAFMVDNEAIYDICRRNLDIERPTYTNLNRLIXQIVSSITASLRFDGALNVDLTEFQTNL 792
Query: 258 IPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASALF 317
+P+PR+HF + + P+ S + L V E+T ++ N + DPRHG+Y+ L+
Sbjct: 791 VPYPRIHFPLATYAPVISAEKAYHEQLXVAEITNACFEPANQLVKCDPRHGKYMACCMLY 612
Query: 318 RGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP--------KGLKMSATFIG 369
RG + K+V+ + ++ K + FV+W P K + PP ++ + +
Sbjct: 611 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 432
Query: 370 NSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 431 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 267
>31457
Length = 1530
Score = 243 bits (620), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 110/122 (90%), Positives = 120/122 (98%)
Frame = +3
Query: 309 RYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSATFI 368
+YLT +A+FRGRMS KEVDEQMLNVQNKNSSYFVEWIPNNVK++VCDIPP+GLKMS+TFI
Sbjct: 234 KYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFI 413
Query: 369 GNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 428
GNSTAIQE+FKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA
Sbjct: 414 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 593
Query: 429 SA 430
+A
Sbjct: 594 TA 599
>25015
Length = 458
Score = 242 bits (617), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 108/118 (91%), Positives = 117/118 (99%)
Frame = -3
Query: 20 FWEVVSDEHGIDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRSG 79
FWEV+SDEHGIDPTGTYHGDSDLQLERINVY+NEATGG+YVPRA+L+DLEPGTMDSVRSG
Sbjct: 363 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSG 184
Query: 80 PYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQVCH 137
P+GQIFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVVRKEAESCDCLQGFQ+ H
Sbjct: 183 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 10
>28905
Length = 425
Score = 237 bits (605), Expect(2) = 1e-63, Method: Compositional matrix adjust.
Identities = 110/129 (85%), Positives = 120/129 (93%), Gaps = 1/129 (0%)
Frame = -1
Query: 253 LAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLT 312
+AVN++PFPRLHFFM GF PLTSRGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT
Sbjct: 389 VAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 210
Query: 313 ASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSATFIGNST 372
+A+FRGRMS KEVDEQMLNVQNKNSSYFVEWIPNNVK++VCDIPP+GLKMS TFIGNST
Sbjct: 209 VAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSGTFIGNST 30
Query: 373 AIQ-EMFKR 380
AIQ +FKR
Sbjct: 29 AIQGRLFKR 3
Score = 23.9 bits (50), Expect(2) = 1e-63, Method: Composition-based stats.
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 242 FPGQLNADL 250
FPGQLNADL
Sbjct: 424 FPGQLNADL 398
>39157
Length = 488
Score = 222 bits (566), Expect(2) = 7e-63, Method: Compositional matrix adjust.
Identities = 105/127 (82%), Positives = 117/127 (92%), Gaps = 3/127 (2%)
Frame = -1
Query: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQLERINVYFNEATGGRYV 60
MREIVH+Q GQCGNQIGAKFWEV+SDEHGIDPTGTYHGDSDLQLERINVY+NEATGG+YV
Sbjct: 443 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 264
Query: 61 PRAILMDLEPGTMDSVRSG-PYG-QIFRPDNFVFGQTGAGNNWAKGHYTE-GAELIDSVL 117
PRA+L+DLEPGTMDSVRSG P+G +IFRPDNFVFGQ+GAGNNW + T+ GAEL+DSVL
Sbjct: 263 PRAVLVDLEPGTMDSVRSGSPFGPKIFRPDNFVFGQSGAGNNWGQKDTTQRGAELVDSVL 84
Query: 118 DVVRKEA 124
DVVRK
Sbjct: 83 DVVRKRG 63
Score = 37.0 bits (84), Expect(2) = 7e-63, Method: Compositional matrix adjust.
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -2
Query: 122 KEAESCDCLQGFQVCH 137
KEAESCDCLQGFQ+ H
Sbjct: 70 KEAESCDCLQGFQLTH 23
>12457
Length = 781
Score = 211 bits (538), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 144/236 (61%)
Frame = -1
Query: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
L+DLEP +D VR+G Y Q+F P+ V G+ A NN+A+GHYT G E++D VLD +RK A
Sbjct: 718 LVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 539
Query: 125 ESCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVVPSPKVSDTVVEPYN 184
+ C LQGF + H + ++ +Y + L F++ P+P+VS VVEPYN
Sbjct: 538 DQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 359
Query: 185 ATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGITCCLRFPG 244
+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN LI ++S IT LRF G
Sbjct: 358 SILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG 179
Query: 245 QLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
LN DL + NL+P+PR+HF + + P+ S + LTV E+T ++ N M
Sbjct: 178 ALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQM 11
>05902
Length = 1127
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 162/284 (57%), Gaps = 12/284 (4%)
Frame = +2
Query: 152 ISKIREEYPDRMMLTFSVVPS-PKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDI 210
+ K+ + +P +++ T+SV P+ ++SD VV+PYN+ L++ +L +NAD +VLDN AL I
Sbjct: 68 LEKLNDRFPKKLIQTYSVFPNVDEISDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRI 247
Query: 211 CFRTLKLTTPTFGDLNHLISAVMSGITCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGF 270
L + TPTF +N L+S VMS T LR+PG +N DL L +LIP PRLHF M G+
Sbjct: 248 AADRLHIDTPTFAQVNQLVSTVMSTSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGY 427
Query: 271 TPLTSRGS-QQYRALTVPELTQQMWDAKNMMCAADPRHGR----YLTASALFRGRMSTKE 325
TPLT+ R TV ++ +++ KNMM + P H + Y++ + +G + +
Sbjct: 428 TPLTTDSQVANVRKTTVLDVMRRLLQPKNMMVST-PVHRQANHCYISILNIIQGEVDPTQ 604
Query: 326 VDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP---KGLKMSATFIGNSTAIQEMFKRVS 382
V + + ++ + + F+ W P +++ ++ P ++S + N T+I +F+R+
Sbjct: 605 VHKSLQRIRERKLAQFIPWGPASIQVALSRKSPYVQTAHRVSGLMLANHTSISHLFERIL 784
Query: 383 EQFTAMFRRKAFLHWYTGEGM--DEM-EFTEAESNMNDLVSEYQ 423
Q+ + +R+AF+ + E + D + EF + + LV EYQ
Sbjct: 785 RQYDKLRKREAFMDQFKKEAIFKDNLDEFDNSREALQLLVDEYQ 916
>06360
Length = 1896
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 103/179 (57%), Gaps = 2/179 (1%)
Frame = -1
Query: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQL--ERINVYFNEATGGR 58
MRE + + GQ G Q+G WE+ EHGI P G D + + N +F+E G+
Sbjct: 1710 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 1531
Query: 59 YVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLD 118
+VPRA+ +DLEP +D VR+G Y Q+F P+ V G+ A NN+A+GHYT G E++D VLD
Sbjct: 1530 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLD 1351
Query: 119 VVRKEAESCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVVPSPKVSD 177
+RK A+ C LQGF + H + ++ +Y + L F++ P+P+VSD
Sbjct: 1350 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSD 1174
>03702
Length = 1932
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 88/153 (57%), Gaps = 1/153 (0%)
Frame = +1
Query: 154 KIREEYPDRMMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
++ +Y + L F++ P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R
Sbjct: 1462 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 1641
Query: 214 TLKLTTPTFGDLNHLISAVMSGITCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVG-FTP 272
L + P + +LN LI ++S IT LRF G LN DL + NL+P P H G P
Sbjct: 1642 NLDIERPXYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPTP--HPLPPGHLCP 1815
Query: 273 LTSRGSQQYRALTVPELTQQMWDAKNMMCAADP 305
+ S + LTV E+T ++ N + DP
Sbjct: 1816 VISAEKAYHEQLTVAEVTNACFEPANQLVKCDP 1914
>17215
Length = 632
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 66/117 (56%), Gaps = 8/117 (6%)
Frame = +3
Query: 316 LFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP--------KGLKMSATF 367
L+RG + K+V+ + ++ K + FV+W P K + PP ++ +
Sbjct: 6 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 185
Query: 368 IGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
+ N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 186 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 356
>29025
Length = 395
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -3
Query: 412 ESNMNDLVSEYQQYQDASA 430
ESNMNDLVSEYQQYQDA+A
Sbjct: 354 ESNMNDLVSEYQQYQDATA 298
>19746
Length = 446
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +1
Query: 339 SYFVEWIPNNVKSSVCDIPPK--GLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLH 396
S F W N+ +V + P + SAT + NS + + E+ MF +A++H
Sbjct: 55 SLFTLWTCPNMAFNVSNQPRAFCAYEKSATLVSNSRSSTRPLDDIMEKAWKMFASRAYIH 234
Query: 397 WYTGEGMDEMEFTEAESNMNDLVSEY 422
Y G+ E +F +A + +V+ Y
Sbjct: 235 QYVKRGLSEEDFLDAFVTLEQVVASY 312
>20906
Length = 408
Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 35 TYHGDSDLQLERINVYFNEATGGRYVPRAILM 66
TY DS + L ++ +FNE TG VPR I M
Sbjct: 2 TYQNDSFISLTVVHYHFNETTG**NVPRQIKM 97
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158278202|gb|EDP03967.1| flagellar associated protein
[Chlamydomonas reinhardtii]
(190 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05616 363 e-101
07552 268 7e-73
28096 28 2.3
22617 27 4.8
>05616
Length = 1678
Score = 363 bits (931), Expect = e-101, Method: Compositional matrix adjust.
Identities = 169/189 (89%), Positives = 181/189 (95%)
Frame = -1
Query: 1 MFKNAFQSGFLSVLYSIGSKPLEIWDKQVSNGHIKRITDADIQSSVLEIMGQNVSTTYIT 60
MFKN FQSGFLS+LYSIGSKPL+IWDK+V NGHIKRITD DIQS VLEI+G NVSTT+IT
Sbjct: 1552 MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTFIT 1373
Query: 61 CPADPNKTLGIKLPFLVLIIKNLNKYFSFEVQVLDDKNVRRRFRASNYQSTTRVKPFICT 120
CPADP KTLGIKLPFLV+IIKNL KYF+FEVQVLDDKNVRRRFRASNYQSTTRVKPFICT
Sbjct: 1372 CPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICT 1193
Query: 121 MPMRLDSGWNQIQFNLSDFTRRAYGTNYIETLRVQVHANCRIRRIYFSDRLYSEEELPAE 180
MPMRLD GWNQIQFNLSDFTRRAYGTNYIETLRVQ+HANCRIRR+YFSDRLYSE+ELPAE
Sbjct: 1192 MPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 1013
Query: 181 FKLFLPIQK 189
FKL+LP+QK
Sbjct: 1012 FKLYLPLQK 986
>07552
Length = 1455
Score = 268 bits (686), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 124/135 (91%), Positives = 131/135 (97%)
Frame = -2
Query: 55 STTYITCPADPNKTLGIKLPFLVLIIKNLNKYFSFEVQVLDDKNVRRRFRASNYQSTTRV 114
STT+ITCPADP KTLGIKLPFLV+IIKNL KYF+FEVQVLDDKNVRRRFRASNYQSTTRV
Sbjct: 1454 STTFITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRV 1275
Query: 115 KPFICTMPMRLDSGWNQIQFNLSDFTRRAYGTNYIETLRVQVHANCRIRRIYFSDRLYSE 174
KPFICTMPMRLD GWNQIQFNLSDFTRRAYGTNYIETLRVQ+HANCRIRR+YFSDRLYSE
Sbjct: 1274 KPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSE 1095
Query: 175 EELPAEFKLFLPIQK 189
EELPAEFKL+LP+ K
Sbjct: 1094 EELPAEFKLYLPVTK 1050
>28096
Length = 900
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -1
Query: 24 IWDKQVSNGHIKRITDADIQSSVLEIMGQNVSTTYI---TCPADPNK 67
IW K V HIK + D +++ S++++ + + I CP P K
Sbjct: 840 IWTKSVLLLHIKDLEDMNLKLSLIKVSAWRLKSNIIYEYLCPCRPLK 700
>22617
Length = 338
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = -2
Query: 40 ADIQSSVLEIMGQNVSTTYITCPADPNKTLGIKLPFLVLIIKNLNKYF 87
A+++++ ++M ++ C + N+ GI + +V N+NKYF
Sbjct: 127 AELKTT*FDLM-------FVACVGEVNRWRGIDVSEIVFTFYNVNKYF 5
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158281104|gb|EDP06860.1| heat shock protein 90B
[Chlamydomonas reinhardtii]
(768 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01628 353 1e-97
11278 254 7e-68
15623 214 2e-60
27487 124 2e-28
25874 75 8e-14
08366 29 7.0
>01628
Length = 2109
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 185/439 (42%), Positives = 276/439 (62%), Gaps = 7/439 (1%)
Frame = -3
Query: 293 ELLNDNKAIWLRKPSDVTEEEYQKFYKAVSKDYTDALTYSHFRAEGDVEFRSILYIPSVS 352
E LN K +W R P D+T EEY +FYK+++ D+ D L HF EG +EFR++L+IP +
Sbjct: 1957 EELNKTKPLWTRNPDDITAEEYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPKRA 1778
Query: 353 PYDFYDKYYEKAQHGLKLYVRRVFISDDMKELIPRYLSFVKGIVDSDTLPLNVSREMLQQ 412
P+D ++ +K ++ +KLYVRRVFI D+ +++IP YL+FVKG+VDS+ LPLN+SREMLQQ
Sbjct: 1777 PFDMFEN--KKKKNNIKLYVRRVFIMDNCEDIIPEYLNFVKGVVDSEDLPLNISREMLQQ 1604
Query: 413 EAALKTIKKKVVRKVLDMIRKMAEAEVKCKEMEEKGETEDKPSEKECGQYAKFWEQFGRA 472
LK I+K +V+K +++I +AE DK Y KF+EQF +
Sbjct: 1603 SKILKVIRKNLVKKCMELIDDLAE---------------DK------DNYNKFYEQFAKN 1487
Query: 473 IKLGIIEDTTNRNRLAKLLRFHTSKTGDQLTTLDEYIGRMKEGQKSIYYLAGTSKEEVAG 532
+KLGI ED+TNR +++ LR+H+S++ D++ T EY+ RMK+ QK IYY+ G ++E V
Sbjct: 1486 LKLGIHEDSTNRKKISDFLRYHSSQSADEMVTFKEYVSRMKDNQKDIYYITGETREAVQN 1307
Query: 533 SPFVEQLLRKGYEVIYFTDVLDEYVMGHLLDYDDKKFSNASKEDLKLTD------KDEEL 586
S FVE++ ++G+EV+Y D +DEY + L +YD K +KE L+L + K EE
Sbjct: 1306 SAFVERVKKRGFEVLYMVDPIDEYCVQQLKEYDGKNLVCVTKEGLELPEDEAEKKKFEEA 1127
Query: 587 KEQFKDLTKWWKKVVDDSKLQGVKVSNRLATTPCIVVTGKYGNSANMERIMRAQAFSRPG 646
K +F+ L K K+++ D K++ V VS RL ++PC +VT +YG SANMERIM+AQA
Sbjct: 1126 KAEFEGLCKAMKEIL-DKKVEKVTVSQRLVSSPCCIVTSQYGWSANMERIMKAQALRDTS 950
Query: 647 S-SFTPTQRTLEINPRHPLIVALKDKLXXXXXXXXXXXXXXXXRLLYETALLESGFVPDD 705
+ + ++ EINP HP++ LK K LL+ETALL SGF +D
Sbjct: 949 TMGYMAAKKHFEINPDHPIVKTLKVKCDADKNDKSVKDLCM---LLFETALLSSGFTLED 779
Query: 706 AKAFSQRMYGVLKDTLGVD 724
+ + R++ ++K LG+D
Sbjct: 778 PTSHANRIHRMVKLGLGID 722
>11278
Length = 988
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 136/245 (55%), Positives = 176/245 (71%), Gaps = 11/245 (4%)
Frame = +1
Query: 18 SGHATATDATSIHREKEAM--------SKQRVRDSGEQFAFQAEVTRLMDIIIHSLYSNK 69
S A+ TD ++ +E+EA+ + +R+ E+FAFQAEV R+M +II+SLY NK
Sbjct: 151 SMEASRTDDETVQKEEEAIKLDGLNVAQMKELREKSEKFAFQAEVNRMMKLIINSLYKNK 330
Query: 70 DIFLRELISNASDALDKIRFLSLTDKSILGDGDTSNLEIKIWLDPESKVLYIRDRGIGMT 129
+IFLRELISNASDALDKIRF+SLT+K +L D L IKI D E+ VL++ D GIGMT
Sbjct: 331 EIFLRELISNASDALDKIRFMSLTNKDVLHATD--ELSIKIKADTENHVLHVTDTGIGMT 504
Query: 130 KDDLIKNLGTIAKSGTSAFLEQMQKGG--DMN-LIGQFGVGFYSVYLVADYVEVVSKHND 186
+DL+KNLGTIAKSGTS FL +M + ++N LIGQFGVGFYS +LVAD V V SKHND
Sbjct: 505 YNDLVKNLGTIAKSGTSDFLAKMGEASPTELNDLIGQFGVGFYSSFLVADRVVVTSKHND 684
Query: 187 DAQYIWSSTADGSFAISEDTENEPLGRGTLIKIHLKEEAQEYGTEAKLKELVQRYSEFIN 246
D QY+W S A+ SF++++D LGRGT I +HLKEEA ++ L LV++YS+FIN
Sbjct: 685 DEQYVWESDAE-SFSVAKDPRGNTLGRGTTISLHLKEEAHDFLEAGTLTSLVKKYSQFIN 861
Query: 247 FPIYL 251
F IY+
Sbjct: 862 FNIYM 876
>15623
Length = 2811
Score = 214 bits (545), Expect(2) = 2e-60, Method: Compositional matrix adjust.
Identities = 111/189 (58%), Positives = 140/189 (74%)
Frame = -1
Query: 63 HSLYSNKDIFLRELISNASDALDKIRFLSLTDKSILGDGDTSNLEIKIWLDPESKVLYIR 122
H L+ ++IFLRELISN+SDALDKIR+ SLTD S L G +L I+I D E K L I
Sbjct: 600 HLLF-QQEIFLRELISNSSDALDKIRYESLTDPSKLDAG--KDLHIRIVPDKERKTLTIE 430
Query: 123 DRGIGMTKDDLIKNLGTIAKSGTSAFLEQMQKGGDMNLIGQFGVGFYSVYLVADYVEVVS 182
D GIGMTK DL+ NLGTIAKSGT AF+E +Q G D+++IGQFGVGFYS YLVAD V V S
Sbjct: 429 DSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADRVVVES 250
Query: 183 KHNDDAQYIWSSTADGSFAISEDTENEPLGRGTLIKIHLKEEAQEYGTEAKLKELVQRYS 242
K+NDD QY W S+A GSF I+ T P+GRGT I + +KE+ QEY E ++KE+++++S
Sbjct: 249 KNNDDEQYTWESSAGGSFTIAAPT-GTPMGRGTRITLFMKEDQQEYLEERRIKEVIKKHS 73
Query: 243 EFINFPIYL 251
+FI +PI L
Sbjct: 72 QFIGYPIKL 46
Score = 37.7 bits (86), Expect(2) = 2e-60, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -2
Query: 29 IHREKEAMSKQRVRDSGEQFAFQAEVTRLMDIIIHSLYSNK 69
+H + + Q E FAFQAE+ +LM +II++ YSNK
Sbjct: 704 LHTKMPEETAQMEETEVETFAFQAEIAQLMSLIINTFYSNK 582
>27487
Length = 377
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 70/93 (75%)
Frame = -3
Query: 462 YAKFWEQFGRAIKLGIIEDTTNRNRLAKLLRFHTSKTGDQLTTLDEYIGRMKEGQKSIYY 521
Y KF+EQF + +KLGI EDTTNR +L L+RFHTSK+G+ +L EYI RMKEGQK I+Y
Sbjct: 279 YKKFYEQFSKNLKLGIHEDTTNRTKLVDLMRFHTSKSGEDQISLKEYIARMKEGQKDIFY 100
Query: 522 LAGTSKEEVAGSPFVEQLLRKGYEVIYFTDVLD 554
+ G S+ V SPF+EQL +KGYEV+Y D +D
Sbjct: 99 ITGESRAAVQASPFIEQLRKKGYEVLYLVDPID 1
>25874
Length = 476
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
Frame = +1
Query: 160 LIGQFGVGFYSVYLVADYVEVVSK-HNDDAQYI-WSSTADGSFAISEDTENEPLGRGTLI 217
LIGQFGVGFYS ++V D V+V +K H + + WSS G++ +SE E + RGT I
Sbjct: 1 LIGQFGVGFYSTFMVGDRVDVFTKSHQPGSPALKWSSDGSGAYEVSEA---EGVQRGTKI 171
Query: 218 KIHLKEEAQEYGTEAKLKELVQRYSEFINFPIYLQ 252
+HLK ++ ++ E + +V++YS F+ PIYL
Sbjct: 172 VVHLKGDSYDFAKEEIITGVVKKYSNFVGVPIYLN 276
>08366
Length = 2167
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +1
Query: 298 NKAIWLRKPSDVTEEEYQKFYKAVSKDYTDALTYSHFRAEGDVEFRSILYIPSVS--PYD 355
KAI P V EEE+ +K ++++ T LT+++ +G V ++ PS S PY+
Sbjct: 742 QKAIVHYHPDKVNEEEHGMKWKVLTEEITKLLTHTYEFYKGCV-*TLLMRSPSCSLTPYE 918
Query: 356 FY 357
FY
Sbjct: 919 FY 924
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|9795170|emb|CAC03467.1| 14-3-3 protein [Chlamydomonas
reinhardtii]
(259 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12344 343 5e-95
13465 205 1e-53
33715 162 9e-41
17028 127 5e-30
15092 100 7e-22
27988 62 5e-15
>12344
Length = 1658
Score = 343 bits (879), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 174/255 (68%), Positives = 206/255 (80%)
Frame = +2
Query: 4 DREECVYMAKLAEQAERYDEMVEEMKKVAKLVHDQELSVEERNLLSVAYKNVIGARRASW 63
DRE+ VY AK +AERYDEMV+ MK VA + D EL+VEERNLLSVAYKNVIGARRASW
Sbjct: 62 DREDQVYQAKQLNRAERYDEMVKFMKIVACM--DVELTVEERNLLSVAYKNVIGARRASW 235
Query: 64 RIISSIEQKEEAKGNEEHVQRIRKYRTVVEEELSKICASILQLLDDHLIPTASTGESKVF 123
RI+SS+EQKE+ +++ + + +YR +E+EL IC +L +L+ HLI A+TGESKVF
Sbjct: 236 RIVSSLEQKEDKCEDKKAINK--EYRMKIEKELKDICEDVLDILEKHLIVNANTGESKVF 409
Query: 124 YLKMKGDYHRYLAEFKTGADRKEAAEHTLLAYKAAQDIALVDLPPTHPIRLGLALNFSVF 183
Y KMKGDYHRYLAEF G DRKEAAE++L+AYKAA DIA+++L PTHPIRLGLALNFSVF
Sbjct: 410 YYKMKGDYHRYLAEFAVGNDRKEAAENSLVAYKAASDIAMIELAPTHPIRLGLALNFSVF 589
Query: 184 YYEILNSPERACHLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTLWTSDMQDPAA 243
YYEILNSP+RAC LAK AFD+AIAELD+L EESYKDSTLIMQLLRDNLTLWTSDMQ
Sbjct: 590 YYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGEGG 769
Query: 244 GDDREGADMKVEDAE 258
E + +V+D E
Sbjct: 770 ---EEQSTQQVQDIE 805
>13465
Length = 596
Score = 205 bits (522), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/154 (65%), Positives = 124/154 (80%)
Frame = +2
Query: 3 VDREECVYMAKLAEQAERYDEMVEEMKKVAKLVHDQELSVEERNLLSVAYKNVIGARRAS 62
DR++ VY AKLAEQAERYDEMVE MKKVA + +D L+VEERNLLSVAYKNVIGARRAS
Sbjct: 113 TDRDDFVYQAKLAEQAERYDEMVEAMKKVASMGND--LTVEERNLLSVAYKNVIGARRAS 286
Query: 63 WRIISSIEQKEEAKGNEEHVQRIRKYRTVVEEELSKICASILQLLDDHLIPTASTGESKV 122
WRI+SS+EQK+ K + + + + YR +E EL +IC +L+++DDHLIP+ + GESKV
Sbjct: 287 WRIVSSVEQKDLDKPDPDKGKMTKGYRQQIETELKQICEDVLKIIDDHLIPSTTQGESKV 466
Query: 123 FYLKMKGDYHRYLAEFKTGADRKEAAEHTLLAYK 156
FY KMKGDY+RYLAEF TG RKEAAE +L+AYK
Sbjct: 467 FYYKMKGDYYRYLAEFATGDPRKEAAESSLVAYK 568
>33715
Length = 434
Score = 162 bits (411), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 82/121 (67%), Positives = 89/121 (73%)
Frame = -1
Query: 125 LKMKGDYHRYLAEFKTGADRKEAAEHTLLAYKAAQDIALVDLPPTHPIRLGLALNFSVFY 184
LKMKGDY+RYL+E G RKE ++ AYK A D+A L THPIRLGLALNFSVF+
Sbjct: 374 LKMKGDYYRYLSEVSQGEQRKENVGKSMEAYKEATDMAKERLSSTHPIRLGLALNFSVFH 195
Query: 185 YEILNSPERACHLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTLWTSDMQDPAAG 244
YEI N P+ AC LAK AFDEAI LD L EESYKDSTLIMQLLRDNLTLWTSD Q
Sbjct: 194 YEIKNCPDEACRLAKIAFDEAIQCLDQLNEESYKDSTLIMQLLRDNLTLWTSDSQGEGTE 15
Query: 245 D 245
D
Sbjct: 14 D 12
>17028
Length = 1078
Score = 127 bits (319), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/105 (61%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Frame = +1
Query: 145 KEAAEHTLLAYKAAQDIALVDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 204
+EA AY A ++A + PTHP RLGLALN+SVFYYEILNS ++AC LAK AFDE
Sbjct: 28 QEAVTKAQEAYNKAMEVAKQSMAPTHPNRLGLALNYSVFYYEILNSQDKACDLAKTAFDE 207
Query: 205 AIAELDSLGE-ESYKDSTLIMQLLRDNLTLWTSDMQDPAAGDDRE 248
AI E+D GE + KDSTLIMQLLRDNLTLWTSD + GDD++
Sbjct: 208 AIQEMDQCGERDDCKDSTLIMQLLRDNLTLWTSD-SNAENGDDQD 339
>15092
Length = 692
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Frame = +3
Query: 5 REECVYMAKLAEQAERYDEMVEEMKKV------AKLVHDQELSVEERNLLSVAYKNVIGA 58
+E V+ AK+AEQAERYD+M E M K A L EERNLLSVAYKNV+GA
Sbjct: 231 KERQVHAAKIAEQAERYDDMAESMHKCVVEGYSANGDKSSTLDNEERNLLSVAYKNVVGA 410
Query: 59 RRASWRIISSIEQKEEAKGNEEHVQRIRKYRTVVEEELSKICASIL 104
RR++WR+ISSIEQK E N++ ++ +KYR VE+EL +IC +L
Sbjct: 411 RRSAWRVISSIEQKTE--NNDKKLEMAKKYREKVEKELKEICTQVL 542
>27988
Length = 448
Score = 61.6 bits (148), Expect(2) = 5e-15, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Frame = +3
Query: 47 LLSVAYKNVIGARRASWRIISSIEQKEEAKGNEEHVQRIRKYRTVVEEELSKICASILQL 106
L SVAYKNV+GARR+SWR+I IEQK E + +E + R +R VE+EL C +L+L
Sbjct: 276 LFSVAYKNVVGARRSSWRVICMIEQKAETQPRKE---KARAFRKDVEKELDATCNEVLKL 446
Score = 36.2 bits (82), Expect(2) = 5e-15, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +2
Query: 6 EECVYMAKLAEQAERYDEMVEEMKKVAKLVHDQELSVEER 45
++ + AKLAEQAERYD+M + MKKV + +D+ L E R
Sbjct: 158 KDLISFAKLAEQAERYDDMAKAMKKVTE--NDKTLMQESR 271
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158271058|gb|EDO96886.1| flagellar associated protein
[Chlamydomonas reinhardtii]
(380 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
32935 186 1e-83
02656 169 1e-42
02733 82 7e-18
31902 63 2e-10
14087 38 3e-08
>32935
Length = 1188
Score = 186 bits (472), Expect(2) = 1e-83, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 137/223 (61%), Gaps = 6/223 (2%)
Frame = +2
Query: 6 RYCFISEWLDPASGILWKYQLFYYPES------KEVEMVDIKNRRHFLKRTKYEELKPSL 59
RY FI EW D S ++Q FY+ S + E D+ + +R + + L+P
Sbjct: 14 RYSFIVEWYDDMSARTLRFQFFYFTNSQVCGDVRHKEPQDVSANQS--ERQRAQSLRP-- 181
Query: 60 LFLGSVVTVFSRQLKLTEYGDEFTRNRMESQSERTLAMIKPDAYKNMGKIINAICQSGFL 119
+ R L + +Y DE+TR ++ S+ ERTL +IKPDA + +G++++ I Q GFL
Sbjct: 182 VHWQQHQPPAPRLLTIVDYDDEYTRRKLTSKRERTLGLIKPDAVEKLGQVLDKILQKGFL 361
Query: 120 ISKLRIGKLSKEEAGEFYAVHAGKPFVDRLTDFMSSGRVVAMELVAPGAIRKWRELIGPT 179
IS+LR+ KL + A EFY H KPF++ L D+++SG VVA E+V A+ WRE IGPT
Sbjct: 362 ISRLRMCKLDRNTALEFYQEHRSKPFLNALLDYVTSGPVVAFEIVGENAVGAWREAIGPT 541
Query: 180 DSNQARAEAPGSLRAQFGTDKTFNACHGSDAPDTAAEECNFWF 222
D + AR EAP S+RAQ+GTD T NA HGSD+P +AA E F+F
Sbjct: 542 DPSLARKEAPTSIRAQYGTDVTCNAVHGSDSPGSAAREVEFFF 670
Score = 141 bits (356), Expect(2) = 1e-83, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 97/143 (67%), Gaps = 4/143 (2%)
Frame = +1
Query: 238 TLCLVKPHLVADGAAGLVIDLIQES-FEVTAGGLYNLDRNAAAEFLEVYKGVLPAGDFNS 296
T C++KP G AG +I+ I E+ F V + ++ L++ A EFLEVYKGV+ ++ +
Sbjct: 718 TCCIIKPSAFKAGVAGKIINAITEAGFRVGSAEMFTLEKANAEEFLEVYKGVV--HEYPA 891
Query: 297 MVEQLTSGACIALEVADRDGADA---VEPFRQLAGPLDPELGRVLRPASLRARFGLDAVR 353
MV +LTSG C+ALE+ G +A FR+LAGP+DPE+ R LRP +LRA FG D ++
Sbjct: 892 MVTELTSGPCLALEIVGGSGTNASLLAPAFRELAGPVDPEIARHLRPRTLRAMFGTDKIK 1071
Query: 354 NGVHCTDLPEDGVLEVNYFFTIL 376
N VHCTDLP+DG LEV YFF IL
Sbjct: 1072NAVHCTDLPDDGPLEVEYFFKIL 1140
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 73/139 (52%), Gaps = 10/139 (7%)
Frame = +1
Query: 94 TLAMIKPDAYKN--MGKIINAICQSGFLISKLRIGKLSKEEAGEFYAVHAG--KPFVDRL 149
T +IKP A+K GKIINAI ++GF + + L K A EF V+ G + +
Sbjct: 718 TCCIIKPSAFKAGVAGKIINAITEAGFRVGSAEMFTLEKANAEEFLEVYKGVVHEYPAMV 897
Query: 150 TDFMSSGRVVAMELVAPGAIRK------WRELIGPTDSNQARAEAPGSLRAQFGTDKTFN 203
T+ ++SG +A+E+V +REL GP D AR P +LRA FGTDK N
Sbjct: 898 TE-LTSGPCLALEIVGGSGTNASLLAPAFRELAGPVDPEIARHLRPRTLRAMFGTDKIKN 1074
Query: 204 ACHGSDAPDTAAEECNFWF 222
A H +D PD E ++F
Sbjct: 1075AVHCTDLPDDGPLEVEYFF 1131
>02656
Length = 2642
Score = 169 bits (429), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/295 (35%), Positives = 159/295 (53%), Gaps = 3/295 (1%)
Frame = +3
Query: 85 NRMESQSERTLAMIKPDAY-KNMGKIINAICQSGFLISKLRIGKLSKEEAGEFYAVHAGK 143
+ + + +RTLA+I+PDA+ N I+ I ++GF I+ + L+KE+A EFY HAG+
Sbjct: 648 QKKKKEVQRTLALIRPDAFANNKDAILEKIKEAGFQIALHKEVSLTKEQAEEFYKEHAGQ 827
Query: 144 PFVDRLTDFMSSGRVVAMELVAPGAIRKWRELIGPTDSNQARAEAPGSLRAQFGTDKT-F 202
P+ D LTD MSSG ++A+ L A+ WRE++GPTD +A+ AP LRAQF D T
Sbjct: 828 PYYDELTDRMSSGPLLALGLAREDAVENWREMLGPTDVEEAKTAAPDCLRAQFAVDSTAI 1007
Query: 203 NACHGSDAPDTAAEECNFWFGPGRYPGKCDLAAGTTLCLVKPHLVADGAAGLVIDLIQES 262
N HGSD+ +A +E F+F T+ ++KP G +I+ I ++
Sbjct: 1008NQLHGSDSTQSAKKELEFFF-----------PVEQTVAMIKPDGY--GTKDAIIEKIHQA 1148
Query: 263 -FEVTAGGLYNLDRNAAAEFLEVYKGVLPAGDFNSMVEQLTSGACIALEVADRDGADAVE 321
F + A + R+ A F + K + S+VE +TSG + + V R+G AV+
Sbjct: 1149GFRIAARKETTITRDIAESFYDDQKD---KDYYESLVEHMTSGPTMFM-VLSREG--AVD 1310
Query: 322 PFRQLAGPLDPELGRVLRPASLRARFGLDAVRNGVHCTDLPEDGVLEVNYFFTIL 376
+R+ GP DP + P SLRA+FG D ++N VH E+ ++ F L
Sbjct: 1311GWREEIGPTDPTKAKEQNPNSLRAQFGTDVLQNAVHGASSSEEAKKKIKAVFGDL 1475
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 152/294 (51%), Gaps = 9/294 (3%)
Frame = +3
Query: 94 TLAMIKPDAYKN--MGKIINAICQSGFLISKLRIGKLSKEEAGEFYAVHAGKPFVDRLTD 151
T+A+IKP+ N + +I+ + G + +L+++EA EFY+ G+ + + L
Sbjct: 219 TVAIIKPNVVANGKVDEILAEMKARGINVKAQEERQLTEDEAREFYSHLQGEEYFEDLVA 398
Query: 152 FMSSGRVVAMELVA----PGAIRKWRELIGPTDSNQARAEAPGSLRAQFGTDKTFNACHG 207
FM+SG + L ++ WR+++GP A+ +AP SLRA++G NA HG
Sbjct: 399 FMASGPSHVLVLTEGQEDDSVVKDWRDMLGPPTVEDAKEQAPESLRARYGQGGLMNAVHG 578
Query: 208 SDAPDTAAEECNFWFGPGRYPG--KCDLAAGTTLCLVKPHLVADGAAGLVIDLIQESFEV 265
SD+ +TAA E F+F + P K TL L++P A+ ++ + + F++
Sbjct: 579 SDSKETAARELAFFFPHMQAPKLQKKKKEVQRTLALIRPDAFANNKDAILEKIKEAGFQI 758
Query: 266 TAGGLYNLDRNAAAEFLEVYKGVLPAGDFNSMVEQLTSGACIALEVADRDGADAVEPFRQ 325
+L + A EF + + G P ++ + ++++SG +AL +A DAVE +R+
Sbjct: 759 ALHKEVSLTKEQAEEFYKEHAG-QPY--YDELTDRMSSGPLLALGLARE---DAVENWRE 920
Query: 326 LAGPLDPELGRVLRPASLRARFGLDAVR-NGVHCTDLPEDGVLEVNYFFTILPT 378
+ GP D E + P LRA+F +D+ N +H +D + E+ +FF + T
Sbjct: 921 MLGPTDVEEAKTAAPDCLRAQFAVDSTAINQLHGSDSTQSAKKELEFFFPVEQT 1082
>02733
Length = 853
Score = 82.0 bits (201), Expect(2) = 7e-18, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 64/111 (57%)
Frame = -1
Query: 113 ICQSGFLISKLRIGKLSKEEAGEFYAVHAGKPFVDRLTDFMSSGRVVAMELVAPGAIRKW 172
I Q+GF I+ + ++++ A FY K + + L + M+SG + M L GA+ W
Sbjct: 742 IHQAGFRIAARKETTITRDIAESFYDDQKDKDYYESLVEHMTSGPTMFMVLSREGAVDGW 563
Query: 173 RELIGPTDSNQARAEAPGSLRAQFGTDKTFNACHGSDAPDTAAEECNFWFG 223
RE IGPTD +A+ + P SLRAQFGTD NA HG+ + + A ++ FG
Sbjct: 562 REEIGPTDPTKAKEQNPNSLRAQFGTDVLQNAVHGASSSEEAKKKIKAVFG 410
Score = 25.8 bits (55), Expect(2) = 7e-18, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -2
Query: 85 NRMESQSERTLAMIKPDAYKN 105
+ + + +RTLA+I+PDA+ N
Sbjct: 828 QKKKKEVQRTLALIRPDAFAN 766
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%)
Frame = -1
Query: 258 LIQESFEVTAGGLYNLDRNAAAEFLEVYKGVLPAGDFNSMVEQLTSGACIALEVADRDGA 317
+ Q F + A + R+ A F + K + S+VE +TSG + + V R+GA
Sbjct: 742 IHQAGFRIAARKETTITRDIAESFYDDQKD---KDYYESLVEHMTSGPTMFM-VLSREGA 575
Query: 318 DAVEPFRQLAGPLDPELGRVLRPASLRARFGLDAVRNGVHCTDLPEDGVLEVNYFFTIL 376
V+ +R+ GP DP + P SLRA+FG D ++N VH E+ ++ F L
Sbjct: 574 --VDGWREEIGPTDPTKAKEQNPNSLRAQFGTDVLQNAVHGASSSEEAKKKIKAVFGDL 404
>31902
Length = 546
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +1
Query: 172 WRELIGPTDSNQARAEAPGSLRAQFGTDKTFNACHGSDAP 211
WRE IGPTD + AR EAP S+RAQ+GTD T NA HGSD+P
Sbjct: 388 WREAIGPTDPSLARKEAPTSIRAQYGTDVTCNAVHGSDSP 507
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 6 RYCFISEWLDPASGILWKYQLFYYPESKEVE 36
RY FI EW D S ++Q FY+ SK VE
Sbjct: 300 RYSFIVEWYDDMSARTLRFQFFYFTNSKSVE 392
>14087
Length = 2025
Score = 37.7 bits (86), Expect(2) = 3e-08, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +2
Query: 145 FVDRLTDFMSSGRVVAMELVAPGAIRKWRELIGPTDSNQA-RAEA 188
+ + L + M+SG + M L GA+ WRE IGPTD ++ RAE+
Sbjct: 2 YYESLVEHMTSGPTMFMVLSREGAVDGWREEIGPTDPTKSQRAES 136
Score = 37.7 bits (86), Expect(2) = 3e-08, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3
Query: 183 QARAEAPGSLRAQFGTDKTFNACHGSDAPDTAAEECNFWFG 223
+A+ + P SLRAQFGTD NA HG+ + + A ++ FG
Sbjct: 117 KAKEQNPNSLRAQFGTDVLQNAVHGASSSEEAKKKIKAVFG 239
Score = 34.7 bits (78), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 329 PLDPELGRVLRPASLRARFGLDAVRNGVHCTDLPEDGVLEVNYFFTIL 376
PL P + P SLRA+FG D ++N VH E+ ++ F L
Sbjct: 102 PLIPLKAKEQNPNSLRAQFGTDVLQNAVHGASSSEEAKKKIKAVFGDL 245
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158280972|gb|EDP06728.1| prohibitin [Chlamydomonas
reinhardtii]
(307 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07529 275 2e-74
20881 186 4e-56
08839 28 6.2
>07529
Length = 1399
Score = 275 bits (702), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 132/226 (58%), Positives = 170/226 (75%)
Frame = +2
Query: 54 GIKDTVYAEGTHIMVPWFERPVLYDVRARPSVIQSQSGSKDLQMVNVGLRVLTRPNADKL 113
G+++ VY EG H VPWF+ P++YD+R+RP I S +GSKDLQMVN+ LRVL+RP A +L
Sbjct: 5 GVQEDVYVEGLHFRVPWFQYPIIYDIRSRPRKITSPTGSKDLQMVNISLRVLSRPIASQL 184
Query: 114 PEIYRTLGTDYAERVLPSIIQETLKSVIAQYNASQLITMREVVSRDIRRILTERARYFNI 173
P +YR+LGTDY ERVLPSI E LKSV+A++NASQLIT R+ VS IRR LTERA+ FNI
Sbjct: 185 PHVYRSLGTDYDERVLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELTERAKDFNI 364
Query: 174 ILEDVSITNLTFSKEYTXXXXXXXXXXXXXXXXXFIVDKALQEKQSAIVRAQGEAQSAKL 233
IL+DVSIT L+F +EYT F+V+KA QEKQ +V+A GEAQ+AKL
Sbjct: 365 ILDDVSITELSFGREYTAAVESKQVAQQEAQRAQFLVEKAKQEKQQKMVQADGEAQAAKL 544
Query: 234 IGEAVKQNPAFLTLRKIEAAREIAGTISQSANKVYLGSDSLLLSVG 279
IG+AV+ NP FL LRKI AA+ I+ T++QS N+VYL + +LLL++G
Sbjct: 545 IGQAVQANPGFLKLRKIRAAQNISRTVAQSQNRVYLNASALLLNIG 682
>20881
Length = 2017
Score = 186 bits (472), Expect(2) = 4e-56, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 142/214 (66%), Gaps = 6/214 (2%)
Frame = +1
Query: 68 VPWFERPVLYDVRARPSVIQSQSGSKDLQMVNVGLRVLTRPNADKLPEIYRTLGTDYAER 127
+PW ++P+++D R+RP + +GSKDLQ VN+ LR+L RP LP+I+ LGTDY ER
Sbjct: 208 IPWVQKPIIFDCRSRPRNVPVVTGSKDLQNVNITLRILFRPQVPSLPKIFTNLGTDYDER 387
Query: 128 VLPSIIQETLKSVIAQYNASQLITMREVVSRDIRRILTERARYFNIILEDVSITNLTFSK 187
VLPSI E LK+++AQ++AS+LIT RE+VS+ + LT+RA F ++L+D+S+T+LTF +
Sbjct: 388 VLPSITNEVLKAIVAQFDASELITQRELVSQKVSEELTDRALQFGLLLDDISLTHLTFGR 567
Query: 188 EYTXXXXXXXXXXXXXXXXXFIVDKALQEKQSAIVRAQGEA----QSAKLIGEAVKQNPA 243
E+T F+V+KA Q+K++A++ A+G++ Q AK GEA
Sbjct: 568 EFTEAVESKQVAQQEAERARFVVEKAEQQKKAAVISAEGDSLAAEQLAKAFGEA---GEG 738
Query: 244 FLTLRKIEAAREIAGTISQSANKVYL--GSDSLL 275
+ LRK+EAA +IA +S+S N VYL G +LL
Sbjct: 739 LVELRKLEAAEDIAYQLSRSRNVVYLPQGQQTLL 840
Score = 49.7 bits (117), Expect(2) = 4e-56, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 29/37 (78%)
Frame = +2
Query: 35 NSLFNVEGGHRAIVFNRVVGIKDTVYAEGTHIMVPWF 71
++L+NV+GGHRA++F+R G++D V EGTH VP F
Sbjct: 107 SALYNVDGGHRAVIFDRFRGVQDAVSGEGTH--VPRF 211
>08839
Length = 613
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = -3
Query: 232 KLIGEAVKQNPAFLTLRKIEAAREIAGTISQSANKVYLGSDSLLL 276
K++G ++ +NP LRKI + + G +++ NKV L + S+LL
Sbjct: 329 KMVGSSL*KNPRRPALRKILWRQFLLGQENKAINKVILKTLSVLL 195
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158282838|gb|EDP08590.1| 14-3-3 protein
[Chlamydomonas reinhardtii]
(247 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12344 253 4e-68
13465 151 2e-37
33715 134 4e-32
17028 102 1e-22
15092 99 2e-21
27988 55 6e-12
>12344
Length = 1658
Score = 253 bits (647), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 131/235 (55%), Positives = 170/235 (72%), Gaps = 1/235 (0%)
Frame = +2
Query: 7 RELALYSAKIAEQSERYQDMVEEMKKVAVLANEQELSVEERNLLSVSYKNLVGSRRASWR 66
RE +Y AK ++ERY +MV+ MK VA + + EL+VEERNLLSV+YKN++G+RRASWR
Sbjct: 65 REDQVYQAKQLNRAERYDEMVKFMKIVACM--DVELTVEERNLLSVAYKNVIGARRASWR 238
Query: 67 ILQSIEQSEQAKGNEKRVGMIKRYRAVVEGELDKICHEILDLLDKYLVPSASTTEAAVFY 126
I+ S+EQ E ++K + K YR +E EL IC ++LD+L+K+L+ +A+T E+ VFY
Sbjct: 239 IVSSLEQKEDKCEDKKAIN--KEYRMKIEKELKDICEDVLDILEKHLIVNANTGESKVFY 412
Query: 127 LKMKADYHRYLSEYXXXXXXXXXXXXXXXXYKVAQEKA-DELPTTNPIRLGLALNFSVFY 185
KMK DYHRYL+E+ YK A + A EL T+PIRLGLALNFSVFY
Sbjct: 413 YKMKGDYHRYLAEFAVGNDRKEAAENSLVAYKAASDIAMIELAPTHPIRLGLALNFSVFY 592
Query: 186 YEVMNQPALACSLAKKAFDEAISDLDSLGEDSYKDSALIMQLLRDNLTLWTSEMQ 240
YE++N P AC LAK AFD+AI++LD+L E+SYKDS LIMQLLRDNLTLWTS+MQ
Sbjct: 593 YEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQ 757
>13465
Length = 596
Score = 151 bits (381), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/134 (52%), Positives = 101/134 (75%)
Frame = +2
Query: 7 RELALYSAKIAEQSERYQDMVEEMKKVAVLANEQELSVEERNLLSVSYKNLVGSRRASWR 66
R+ +Y AK+AEQ+ERY +MVE MKKVA + N+ L+VEERNLLSV+YKN++G+RRASWR
Sbjct: 119 RDDFVYQAKLAEQAERYDEMVEAMKKVASMGND--LTVEERNLLSVAYKNVIGARRASWR 292
Query: 67 ILQSIEQSEQAKGNEKRVGMIKRYRAVVEGELDKICHEILDLLDKYLVPSASTTEAAVFY 126
I+ S+EQ + K + + M K YR +E EL +IC ++L ++D +L+PS + E+ VFY
Sbjct: 293 IVSSVEQKDLDKPDPDKGKMTKGYRQQIETELKQICEDVLKIIDDHLIPSTTQGESKVFY 472
Query: 127 LKMKADYHRYLSEY 140
KMK DY+RYL+E+
Sbjct: 473 YKMKGDYYRYLAEF 514
>33715
Length = 434
Score = 134 bits (336), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
Frame = -1
Query: 127 LKMKADYHRYLSEYXXXXXXXXXXXXXXXXYKVAQEKADE-LPTTNPIRLGLALNFSVFY 185
LKMK DY+RYLSE YK A + A E L +T+PIRLGLALNFSVF+
Sbjct: 374 LKMKGDYYRYLSEVSQGEQRKENVGKSMEAYKEATDMAKERLSSTHPIRLGLALNFSVFH 195
Query: 186 YEVMNQPALACSLAKKAFDEAISDLDSLGEDSYKDSALIMQLLRDNLTLWTSEMQ 240
YE+ N P AC LAK AFDEAI LD L E+SYKDS LIMQLLRDNLTLWTS+ Q
Sbjct: 194 YEIKNCPDEACRLAKIAFDEAIQCLDQLNEESYKDSTLIMQLLRDNLTLWTSDSQ 30
>17028
Length = 1078
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 67/95 (70%), Gaps = 5/95 (5%)
Frame = +1
Query: 157 YKVAQEKADE-LPTTNPIRLGLALNFSVFYYEVMNQPALACSLAKKAFDEAISDLDSLGE 215
Y A E A + + T+P RLGLALN+SVFYYE++N AC LAK AFDEAI ++D GE
Sbjct: 58 YNKAMEVAKQSMAPTHPNRLGLALNYSVFYYEILNSQDKACDLAKTAFDEAIQEMDQCGE 237
Query: 216 -DSYKDSALIMQLLRDNLTLWTSEM---QDDDKNR 246
D KDS LIMQLLRDNLTLWTS+ DD++R
Sbjct: 238 RDDCKDSTLIMQLLRDNLTLWTSDSNAENGDDQDR 342
>15092
Length = 692
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 79/116 (68%), Gaps = 6/116 (5%)
Frame = +3
Query: 3 EANSRELALYSAKIAEQSERYQDMVEEMKKVAV---LANEQELSV---EERNLLSVSYKN 56
E + +E +++AKIAEQ+ERY DM E M K V AN + S EERNLLSV+YKN
Sbjct: 219 ELSPKERQVHAAKIAEQAERYDDMAESMHKCVVEGYSANGDKSSTLDNEERNLLSVAYKN 398
Query: 57 LVGSRRASWRILQSIEQSEQAKGNEKRVGMIKRYRAVVEGELDKICHEILDLLDKY 112
+VG+RR++WR++ SIEQ + + N+K++ M K+YR VE EL +IC ++L + Y
Sbjct: 399 VVGARRSAWRVISSIEQ--KTENNDKKLEMAKKYREKVEKELKEICTQVLVRIHHY 560
>27988
Length = 448
Score = 55.1 bits (131), Expect(2) = 6e-12, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%)
Frame = +3
Query: 49 LLSVSYKNLVGSRRASWRILQSIEQSEQAKGNEKRVGMIKRYRAVVEGELDKICHEILDL 108
L SV+YKN+VG+RR+SWR++ IEQ + + +++ + +R VE ELD C+E+L L
Sbjct: 276 LFSVAYKNVVGARRSSWRVICMIEQKAETQPRKEKA---RAFRKDVEKELDATCNEVLKL 446
Score = 32.0 bits (71), Expect(2) = 6e-12, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +2
Query: 14 AKIAEQSERYQDMVEEMKKVAVLANEQELSVEER 47
AK+AEQ+ERY DM + MKKV N++ L E R
Sbjct: 176 AKLAEQAERYDDMAKAMKKVT--ENDKTLMQESR 271
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158281196|gb|EDP06952.1| protofilament ribbon protein
of flagellar microtubules [Chlamydomonas reinhardtii]
(635 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01678 251 5e-67
03616 177 1e-44
18545 89 7e-18
15966 41 0.001
01773 40 0.003
14594 33 0.35
14945 32 1.1
22063 32 1.2
11285 30 3.2
07198 29 4.5
00167 29 6.0
31819 28 8.0
>01678
Length = 2407
Score = 251 bits (642), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 152/400 (38%), Positives = 212/400 (53%), Gaps = 43/400 (10%)
Frame = +2
Query: 260 DRLRQFLENNKKVLRFWCVWDERTTMYGDRRPYVLHYYLEDDSVEVLEINENNSGRDPFP 319
D L+QFL++++ VLRF+C WD+ M+GD R V+HY+L DD++E+ E+ NSGRD P
Sbjct: 56 DTLKQFLDHDRHVLRFFCYWDDTDNMFGDPRQMVMHYFLADDTLEIREVIPPNSGRDSAP 235
Query: 320 VFLKRGPLPK-------VAVKTNTT-----------------------LNPKFRKDQCYN 349
VFL+RG LPK V+T+ T ++P+F KD
Sbjct: 236 VFLRRGRLPKNIEALNQPGVRTDRTVLNVFGPMGHGGRYILDSLKTGAVHPEFYKD---- 403
Query: 350 AGDFRLGLFINVLGRDFYLHDADTFTKQWYKDNLGYTDEEMSPVDV-KEPILPKPRAAVP 408
DF LG INV GR F L D D FTK++Y G T E SP + P
Sbjct: 404 -SDFTLGTAINVWGRKFVLCDCDQFTKEYYTTKYGIT--EFSPCSFGPGGSGGLGKREFP 574
Query: 409 PFNGYGTIEDSLQNCLSLVPKPPKRDLHKLMNKDKI-----ILRFVVKMVDTDTHKHSAT 463
P+NG+G+ EDSL +C+ L+PKPPKRD K M +D+ +LRF+ +M DT K
Sbjct: 575 PYNGFGSEEDSLCSCMGLLPKPPKRDFIKFMERDRRGLDSNVLRFLARM---DTEK--PI 739
Query: 464 DLARRFILSYFMMDDSNLIFEPPVRNTGIAGGKFLERQKIYKPRS-------EEIYTYLD 516
D RRFI+SYF+ DD+ L+FEPPVRN+GI GGKFLER ++ KP E Y D
Sbjct: 740 DKDRRFIISYFLSDDTLLVFEPPVRNSGIIGGKFLERGRVKKPNQMPYSTELSEYYLASD 919
Query: 517 LYVGATIEVFNRTFELLEADEYTLTYMENYKDIFVMADTDVLIRSLKAQVSGKEDAVRSS 576
L+VGA + F L++ADEY YME + F + ++ +++++S D VRS
Sbjct: 920 LFVGAAVNFNKHKFILIDADEYAFRYMEEHPLEFPKTNMQRILEKIRSKLSQNMDDVRSF 1099
Query: 577 VIAADKSGSGALTGDDLEAGLQSAGLKFTRHQAISLKRRL 616
+D +G G L T + +++ R
Sbjct: 1100FTRSDSNGGGVADYAQFRQLLIQVDNTLTEQEIMTVARHF 1219
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 144/341 (42%), Gaps = 43/341 (12%)
Frame = +2
Query: 85 LPQWVENDRKVLRFYGYFKESVVESNMENHRIRKVILYYYLEDDSMHVAEPRQDNSGIPQ 144
L Q++++DR VLRF+ Y+ ++ NM R+++++Y+L DD++ + E NSG
Sbjct: 62 LKQFLDHDRHVLRFFCYWDDT---DNMFGDP-RQMVMHYFLADDTLEIREVIPPNSGRDS 229
Query: 145 G-VFIKRHRVTRDDGSFFNPG--------------------------------------D 165
VF++R R+ ++ + PG D
Sbjct: 230 APVFLRRGRLPKNIEALNQPGVRTDRTVLNVFGPMGHGGRYILDSLKTGAVHPEFYKDSD 409
Query: 166 FSVGDTVSIYGRNFYLVDADSFTREFMAAR-GKEQGGPLPYPGDPVDVYRATFGMNRGRA 224
F++G ++++GR F L D D FT+E+ + G + P +FG
Sbjct: 410 FTLGTAINVWGRKFVLCDCDQFTKEYYTTKYGITEFSP------------CSFGPGGSGG 553
Query: 225 PQAREDSPGSTTRRVNDFKAYVEARLGKP---SHLLDGDRLRQFLENNKKVLRFWCVWDE 281
RE P + D L KP + +R R+ L++N VLRF D
Sbjct: 554 LGKREFPPYNGFGSEEDSLCSCMGLLPKPPKRDFIKFMERDRRGLDSN--VLRFLARMDT 727
Query: 282 RTTMYGDRRPYVLHYYLEDDSVEVLEINENNSGRDPFPVFLKRGPLPKVAVKTNTTLNPK 341
+ DRR +++ Y+L DD++ V E NSG FL+RG VK +
Sbjct: 728 EKPIDKDRR-FIISYFLSDDTLLVFEPPVRNSGIIG-GKFLERG-----RVKKPNQMPYS 886
Query: 342 FRKDQCYNAGDFRLGLFINVLGRDFYLHDADTFTKQWYKDN 382
+ Y A D +G +N F L DAD + ++ +++
Sbjct: 887 TELSEYYLASDLFVGAAVNFNKHKFILIDADEYAFRYMEEH 1009
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Frame = +2
Query: 71 GVLPASMMQDTATKLPQWVENDRK-----VLRFYGYFKESVVESNMENHRIRKVILYYYL 125
G+LP +D +++E DR+ VLRF + +++ + R+ I+ Y+L
Sbjct: 623 GLLPKPPKRD----FIKFMERDRRGLDSNVLRFL-----ARMDTEKPIDKDRRFIISYFL 775
Query: 126 EDDSMHVAEPRQDNSGIPQGVFIKRHRVTRDD--------GSFFNPGDFSVGDTVSIYGR 177
DD++ V EP NSGI G F++R RV + + ++ D VG V+
Sbjct: 776 SDDTLLVFEPPVRNSGIIGGKFLERGRVKKPNQMPYSTELSEYYLASDLFVGAAVNFNKH 955
Query: 178 NFYLVDADSFTREFMAARGKEQGGPLPYP 206
F L+DAD + +M + PL +P
Sbjct: 956 KFILIDADEYAFRYM------EEHPLEFP 1024
>03616
Length = 2372
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 170/328 (51%), Gaps = 11/328 (3%)
Frame = +2
Query: 316 DPFPVFLKRGPLPKVAVKTNTT-------LNPKFRKDQCYNAGDFRLGLFINVLGRDFYL 368
DPFPV + R +PK ++ L+ KD + DF +G +++ GR F +
Sbjct: 2 DPFPVLIGRHKVPKDRYGVPSSFPAVVMELSDNEIKDY-FTPKDFMVGQTVSLYGRRFLV 178
Query: 369 HDADTFTKQWYKDNLGYTDEEMSPVDVKEPILPKPRAAVPPFNGYGTIEDSLQNCLSLVP 428
+D D FTK +Y N G TD VD P+ +PP+N +G++EDSLQ+CLSL+P
Sbjct: 179 YDTDNFTKAFYYHNFGITD--FPKVDTAGNGKGLPKMEIPPYNNFGSLEDSLQSCLSLIP 352
Query: 429 KPPKRDLHKLMNKDKIILRFVVKMVDTDTHKHSATDLARRFILSYFMMDDSNLIFEPPVR 488
+PPK+D K++ D +LRF M D+ + D RRFI+SY + DD ++EP VR
Sbjct: 353 QPPKKDFIKMLENDHKVLRFEAIM---DSLR--PEDSGRRFIISYRLADDMLTVYEPQVR 517
Query: 489 NTGIAGGKFLERQKIYKPRSE----EIYTYLDLYVGATIEVFNRTFELLEADEYTLTYME 544
N+GI GGKFLER ++ KP S + Y D ++GA IE+FN F + AD + L+YME
Sbjct: 518 NSGIIGGKFLERTRVAKPGSAPDRPDYYGPQDFFIGAVIEIFNHRFVITNADAFVLSYME 697
Query: 545 NYKDIFVMADTDVLIRSLKAQVSGKEDAVRSSVIAADKSGSGALTGDDLEAGLQSAGLKF 604
+ + F A + L L GKE + G + A L+ +
Sbjct: 698 EHANQFPPATVNSLKEKLGQTXPGKEMVKGGPMKVKRSQGDLDQLVRQVRAQLKKIAIT- 874
Query: 605 TRHQAISLKRRLDKNKTGTISIEEFLGL 632
+ + + R D+++TG IS+E L
Sbjct: 875 DKSRVDEMFLRYDRDRTGYISVENMRDL 958
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Frame = +2
Query: 87 QWVENDRKVLRFYGYFKESVVESNMENHRIRKVILYYYLEDDSMHVAEPRQDNSGIPQGV 146
+ +END KVLRF E++++S R+ I+ Y L DD + V EP+ NSGI G
Sbjct: 377 KMLENDHKVLRF-----EAIMDSLRPEDSGRRFIISYRLADDMLTVYEPQVRNSGIIGGK 541
Query: 147 FIKRHRVTR-----DDGSFFNPGDFSVGDTVSIYGRNFYLVDADSFTREFMAARGKE 198
F++R RV + D ++ P DF +G + I+ F + +AD+F +M +
Sbjct: 542 FLERTRVAKPGSAPDRPDYYGPQDFFIGAVIEIFNHRFVITNADAFVLSYMEEHANQ 712
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 101/264 (38%), Gaps = 24/264 (9%)
Frame = +2
Query: 143 PQGVFIKRHRVTRDD-------------------GSFFNPGDFSVGDTVSIYGRNFYLVD 183
P V I RH+V +D +F P DF VG TVS+YGR F + D
Sbjct: 5 PFPVLIGRHKVPKDRYGVPSSFPAVVMELSDNEIKDYFTPKDFMVGQTVSLYGRRFLVYD 184
Query: 184 ADSFTREFMAARGKEQGGPLPYPGDPVDVYRATFGMNRGRAPQAREDSPGSTTRRVNDFK 243
D+FT+ F Y FG+ + G + +
Sbjct: 185 TDNFTKAF---------------------YYHNFGITDFPKVDTAGNGKGLPKMEIPPYN 301
Query: 244 AY--VEARLGKPSHLLDGDRLRQF---LENNKKVLRFWCVWDERTTMYGDRRPYVLHYYL 298
+ +E L L+ + F LEN+ KVLRF + D RR +++ Y L
Sbjct: 302 NFGSLEDSLQSCLSLIPQPPKKDFIKMLENDHKVLRFEAIMDSLRPEDSGRR-FIISYRL 478
Query: 299 EDDSVEVLEINENNSGRDPFPVFLKRGPLPKVAVKTNTTLNPKFRKDQCYNAGDFRLGLF 358
DD + V E NSG FL+R +VA + P + Y DF +G
Sbjct: 479 ADDMLTVYEPQVRNSGIIGGK-FLERT---RVAKPGSAPDRPDY-----YGPQDFFIGAV 631
Query: 359 INVLGRDFYLHDADTFTKQWYKDN 382
I + F + +AD F + +++
Sbjct: 632 IEIFNHRFVITNADAFVLSYMEEH 703
>18545
Length = 478
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 4/155 (2%)
Frame = -1
Query: 27 FKKGQTLTYVNGYQR-EDALAQVKDLPERIAQATDGALASGAMGTGVLPASMMQDTATK- 84
F +L Y NGY + A + P Q L A L + +
Sbjct: 466 FHLSHSLCYKNGYALPKRAECGIGGKPINFNQLDQADLDQLASFNPTLTYGQAKQAPPED 287
Query: 85 -LPQWVENDRKVLRFYGYFKESVVESNMENHRIRKVILYYYLEDDSMHVAEPRQDNSGIP 143
+P V D+KVL+F Y+K++V ES E R+R V +YYYLEDDS+ V EP +NSG+P
Sbjct: 286 FIPAHVAWDKKVLKFNAYYKQTVHESQNEYFRVRPVDIYYYLEDDSIAVIEPHVENSGMP 107
Query: 144 QGVFIKRHRVTRDD-GSFFNPGDFSVGDTVSIYGR 177
QG IKR R+ ++D G ++ D + G V+ YG+
Sbjct: 106 QGKLIKRQRLPKNDRGDXWHWKDINNGQNVTFYGK 2
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%)
Frame = -1
Query: 430 PPKRDLHKLMNKDKIILRFVVKMVDTDTHKHSATDLARRFILSYFMMDDSNLIFEPPVRN 489
PP+ + + DK +L+F T + R + Y++ DDS + EP V N
Sbjct: 298 PPEDFIPAHVAWDKKVLKFNAYYKQTVHESQNEYFRVRPVDIYYYLEDDSIAVIEPHVEN 119
Query: 490 TGIAGGKFLERQKIYKPRSEEIYTYLDLYVGATIEVFNR 528
+G+ GK ++RQ++ K + + + D+ G + + +
Sbjct: 118 SGMPQGKLIKRQRLPKNDRGDXWHWKDINNGQNVTFYGK 2
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = -1
Query: 269 NKKVLRFWCVW----DERTTMYGDRRPYVLHYYLEDDSVEVLEINENNSGRDPFPVFLKR 324
+KKVL+F + E Y RP ++YYLEDDS+ V+E + NSG P +KR
Sbjct: 262 DKKVLKFNAYYKQTVHESQNEYFRVRPVDIYYYLEDDSIAVIEPHVENSGM-PQGKLIKR 86
Query: 325 GPLPK 329
LPK
Sbjct: 85 QRLPK 71
>15966
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +2
Query: 579 AADKSGSGALTGDDLEAGLQSAGLKFTRHQAISLKRRLDKNKTGTISIEEFL 630
A DKSG G L D+L+A L +G KFT ++ + DKN I EEF+
Sbjct: 158 AKDKSGDGYLDRDELKALLDESGQKFTADDVSAILKSADKNNDNKICFEEFV 313
>01773
Length = 1950
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +1
Query: 579 AADKSGSGALTGDDLEAGLQSAGLKFTRHQAISLKRRLDKNKTGTISIEEFL 630
A DKSG G L D+L+A L +G KFT ++ + DKN I EEF+
Sbjct: 391 AKDKSGDGYLDRDELKALLDESGQKFTADDVSAILKSADKNNDNKICFEEFV 546
>14594
Length = 1014
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 581 DKSGSGALTGDDLEAGLQSAGLKFTRHQAISLKRRLDKNKTGTISIEEFLGLLG 634
DK G G +T +L ++S G T ++ + +D + GTI EEFL ++
Sbjct: 471 DKDGDGTITTSELGTVMRSLGQNPTENELQDMINEVDADGNGTIDFEEFLHMMA 632
>14945
Length = 1337
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +1
Query: 573 VRSSVIAADKSGSGALTGDDLEAGLQSAGLKFTRHQAISLKRRLDKNKTGTISIEEFLGL 632
+R + D GSG + +L+ +++ G + + + + +DK TGTI +FL +
Sbjct: 118 IREAFDLFDADGSGTIDAKELKVAMRALGFEPKKEEIKKMIAEIDKEGTGTIDFNDFLTI 297
Query: 633 L 633
+
Sbjct: 298 M 300
>22063
Length = 688
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +3
Query: 573 VRSSVIAADKSGSGALTGDDLEAGLQSAGLKFTRHQAISLKRRLDKNKTGTISIEEFLGL 632
+R + D GSG + +L+ +++ G + + + + +DK TGTI +FL +
Sbjct: 177 IREAFDLFDADGSGTIDAKELKVAMRALGFEPKKEEIKKMIAEIDKEGTGTIDFNDFLTI 356
Query: 633 L 633
+
Sbjct: 357 M 359
>11285
Length = 841
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 177 RNFYLVDADSFTREFMAARGKEQGGPLPYPGDPVDVYRATFGM 219
+ + +D D +A + +E GG PGD VD + FG+
Sbjct: 200 QRLHWIDKDKLQVFMLACQDEETGGFADRPGDMVDPFHTLFGL 328
>07198
Length = 1675
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -3
Query: 614 RRLDKNKTGTISIEEFL 630
R+ DKNK GTIS+EEF+
Sbjct: 359 RQSDKNKDGTISMEEFM 309
>00167
Length = 2176
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 588 LTGDDLEAGLQSAGL-KFTRHQAISLKRRLDKNKTGTISIEEFL 630
L+ D+ G + + K T + + RR DK+ TGT+ EEFL
Sbjct: 780 LSVDEFIVGCRECRIAKMTSEELNEVFRRFDKDGTGTLDFEEFL 911
>31819
Length = 716
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 49/138 (35%), Gaps = 7/138 (5%)
Frame = +1
Query: 458 HKHSATDLARRFILSYFMMDDSNLIFEPPVRNTGIAGGKFLERQKIYKPRSEEIYTYLDL 517
HK + DL RF P+ N K LE K+ ++EE+ Y
Sbjct: 64 HKMTVGDLQTRF----------------PLVNWVQFMNKLLESTKVRINKTEEVVVYAPR 195
Query: 518 YVGATIEVFNRTFELLEADEYTLTYMENYKDIFVMADTDVLIRSLK-------AQVSGKE 570
Y+ + N T LE Y+E + +++ R K + V+GKE
Sbjct: 196 YLEKLTVILNDTLSTLEGRRAVNLYLEWHVVKQLISYLSKPFREAKKAFSEVLSGVTGKE 375
Query: 571 DAVRSSVIAADKSGSGAL 588
D R + D AL
Sbjct: 376 DEWRDCITDTDSVVGFAL 429
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158281196|gb|EDP06952.1| protofilament ribbon protein
of flagellar microtubules [Chlamydomonas reinhardtii]
(635 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01678 251 5e-67
03616 177 1e-44
18545 89 7e-18
15966 41 0.001
01773 40 0.003
14594 33 0.35
14945 32 1.1
22063 32 1.2
11285 30 3.2
07198 29 4.5
00167 29 6.0
31819 28 8.0
>01678
Length = 2407
Score = 251 bits (642), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 152/400 (38%), Positives = 212/400 (53%), Gaps = 43/400 (10%)
Frame = +2
Query: 260 DRLRQFLENNKKVLRFWCVWDERTTMYGDRRPYVLHYYLEDDSVEVLEINENNSGRDPFP 319
D L+QFL++++ VLRF+C WD+ M+GD R V+HY+L DD++E+ E+ NSGRD P
Sbjct: 56 DTLKQFLDHDRHVLRFFCYWDDTDNMFGDPRQMVMHYFLADDTLEIREVIPPNSGRDSAP 235
Query: 320 VFLKRGPLPK-------VAVKTNTT-----------------------LNPKFRKDQCYN 349
VFL+RG LPK V+T+ T ++P+F KD
Sbjct: 236 VFLRRGRLPKNIEALNQPGVRTDRTVLNVFGPMGHGGRYILDSLKTGAVHPEFYKD---- 403
Query: 350 AGDFRLGLFINVLGRDFYLHDADTFTKQWYKDNLGYTDEEMSPVDV-KEPILPKPRAAVP 408
DF LG INV GR F L D D FTK++Y G T E SP + P
Sbjct: 404 -SDFTLGTAINVWGRKFVLCDCDQFTKEYYTTKYGIT--EFSPCSFGPGGSGGLGKREFP 574
Query: 409 PFNGYGTIEDSLQNCLSLVPKPPKRDLHKLMNKDKI-----ILRFVVKMVDTDTHKHSAT 463
P+NG+G+ EDSL +C+ L+PKPPKRD K M +D+ +LRF+ +M DT K
Sbjct: 575 PYNGFGSEEDSLCSCMGLLPKPPKRDFIKFMERDRRGLDSNVLRFLARM---DTEK--PI 739
Query: 464 DLARRFILSYFMMDDSNLIFEPPVRNTGIAGGKFLERQKIYKPRS-------EEIYTYLD 516
D RRFI+SYF+ DD+ L+FEPPVRN+GI GGKFLER ++ KP E Y D
Sbjct: 740 DKDRRFIISYFLSDDTLLVFEPPVRNSGIIGGKFLERGRVKKPNQMPYSTELSEYYLASD 919
Query: 517 LYVGATIEVFNRTFELLEADEYTLTYMENYKDIFVMADTDVLIRSLKAQVSGKEDAVRSS 576
L+VGA + F L++ADEY YME + F + ++ +++++S D VRS
Sbjct: 920 LFVGAAVNFNKHKFILIDADEYAFRYMEEHPLEFPKTNMQRILEKIRSKLSQNMDDVRSF 1099
Query: 577 VIAADKSGSGALTGDDLEAGLQSAGLKFTRHQAISLKRRL 616
+D +G G L T + +++ R
Sbjct: 1100FTRSDSNGGGVADYAQFRQLLIQVDNTLTEQEIMTVARHF 1219
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 144/341 (42%), Gaps = 43/341 (12%)
Frame = +2
Query: 85 LPQWVENDRKVLRFYGYFKESVVESNMENHRIRKVILYYYLEDDSMHVAEPRQDNSGIPQ 144
L Q++++DR VLRF+ Y+ ++ NM R+++++Y+L DD++ + E NSG
Sbjct: 62 LKQFLDHDRHVLRFFCYWDDT---DNMFGDP-RQMVMHYFLADDTLEIREVIPPNSGRDS 229
Query: 145 G-VFIKRHRVTRDDGSFFNPG--------------------------------------D 165
VF++R R+ ++ + PG D
Sbjct: 230 APVFLRRGRLPKNIEALNQPGVRTDRTVLNVFGPMGHGGRYILDSLKTGAVHPEFYKDSD 409
Query: 166 FSVGDTVSIYGRNFYLVDADSFTREFMAAR-GKEQGGPLPYPGDPVDVYRATFGMNRGRA 224
F++G ++++GR F L D D FT+E+ + G + P +FG
Sbjct: 410 FTLGTAINVWGRKFVLCDCDQFTKEYYTTKYGITEFSP------------CSFGPGGSGG 553
Query: 225 PQAREDSPGSTTRRVNDFKAYVEARLGKP---SHLLDGDRLRQFLENNKKVLRFWCVWDE 281
RE P + D L KP + +R R+ L++N VLRF D
Sbjct: 554 LGKREFPPYNGFGSEEDSLCSCMGLLPKPPKRDFIKFMERDRRGLDSN--VLRFLARMDT 727
Query: 282 RTTMYGDRRPYVLHYYLEDDSVEVLEINENNSGRDPFPVFLKRGPLPKVAVKTNTTLNPK 341
+ DRR +++ Y+L DD++ V E NSG FL+RG VK +
Sbjct: 728 EKPIDKDRR-FIISYFLSDDTLLVFEPPVRNSGIIG-GKFLERG-----RVKKPNQMPYS 886
Query: 342 FRKDQCYNAGDFRLGLFINVLGRDFYLHDADTFTKQWYKDN 382
+ Y A D +G +N F L DAD + ++ +++
Sbjct: 887 TELSEYYLASDLFVGAAVNFNKHKFILIDADEYAFRYMEEH 1009
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Frame = +2
Query: 71 GVLPASMMQDTATKLPQWVENDRK-----VLRFYGYFKESVVESNMENHRIRKVILYYYL 125
G+LP +D +++E DR+ VLRF + +++ + R+ I+ Y+L
Sbjct: 623 GLLPKPPKRD----FIKFMERDRRGLDSNVLRFL-----ARMDTEKPIDKDRRFIISYFL 775
Query: 126 EDDSMHVAEPRQDNSGIPQGVFIKRHRVTRDD--------GSFFNPGDFSVGDTVSIYGR 177
DD++ V EP NSGI G F++R RV + + ++ D VG V+
Sbjct: 776 SDDTLLVFEPPVRNSGIIGGKFLERGRVKKPNQMPYSTELSEYYLASDLFVGAAVNFNKH 955
Query: 178 NFYLVDADSFTREFMAARGKEQGGPLPYP 206
F L+DAD + +M + PL +P
Sbjct: 956 KFILIDADEYAFRYM------EEHPLEFP 1024
>03616
Length = 2372
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 170/328 (51%), Gaps = 11/328 (3%)
Frame = +2
Query: 316 DPFPVFLKRGPLPKVAVKTNTT-------LNPKFRKDQCYNAGDFRLGLFINVLGRDFYL 368
DPFPV + R +PK ++ L+ KD + DF +G +++ GR F +
Sbjct: 2 DPFPVLIGRHKVPKDRYGVPSSFPAVVMELSDNEIKDY-FTPKDFMVGQTVSLYGRRFLV 178
Query: 369 HDADTFTKQWYKDNLGYTDEEMSPVDVKEPILPKPRAAVPPFNGYGTIEDSLQNCLSLVP 428
+D D FTK +Y N G TD VD P+ +PP+N +G++EDSLQ+CLSL+P
Sbjct: 179 YDTDNFTKAFYYHNFGITD--FPKVDTAGNGKGLPKMEIPPYNNFGSLEDSLQSCLSLIP 352
Query: 429 KPPKRDLHKLMNKDKIILRFVVKMVDTDTHKHSATDLARRFILSYFMMDDSNLIFEPPVR 488
+PPK+D K++ D +LRF M D+ + D RRFI+SY + DD ++EP VR
Sbjct: 353 QPPKKDFIKMLENDHKVLRFEAIM---DSLR--PEDSGRRFIISYRLADDMLTVYEPQVR 517
Query: 489 NTGIAGGKFLERQKIYKPRSE----EIYTYLDLYVGATIEVFNRTFELLEADEYTLTYME 544
N+GI GGKFLER ++ KP S + Y D ++GA IE+FN F + AD + L+YME
Sbjct: 518 NSGIIGGKFLERTRVAKPGSAPDRPDYYGPQDFFIGAVIEIFNHRFVITNADAFVLSYME 697
Query: 545 NYKDIFVMADTDVLIRSLKAQVSGKEDAVRSSVIAADKSGSGALTGDDLEAGLQSAGLKF 604
+ + F A + L L GKE + G + A L+ +
Sbjct: 698 EHANQFPPATVNSLKEKLGQTXPGKEMVKGGPMKVKRSQGDLDQLVRQVRAQLKKIAIT- 874
Query: 605 TRHQAISLKRRLDKNKTGTISIEEFLGL 632
+ + + R D+++TG IS+E L
Sbjct: 875 DKSRVDEMFLRYDRDRTGYISVENMRDL 958
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Frame = +2
Query: 87 QWVENDRKVLRFYGYFKESVVESNMENHRIRKVILYYYLEDDSMHVAEPRQDNSGIPQGV 146
+ +END KVLRF E++++S R+ I+ Y L DD + V EP+ NSGI G
Sbjct: 377 KMLENDHKVLRF-----EAIMDSLRPEDSGRRFIISYRLADDMLTVYEPQVRNSGIIGGK 541
Query: 147 FIKRHRVTR-----DDGSFFNPGDFSVGDTVSIYGRNFYLVDADSFTREFMAARGKE 198
F++R RV + D ++ P DF +G + I+ F + +AD+F +M +
Sbjct: 542 FLERTRVAKPGSAPDRPDYYGPQDFFIGAVIEIFNHRFVITNADAFVLSYMEEHANQ 712
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 101/264 (38%), Gaps = 24/264 (9%)
Frame = +2
Query: 143 PQGVFIKRHRVTRDD-------------------GSFFNPGDFSVGDTVSIYGRNFYLVD 183
P V I RH+V +D +F P DF VG TVS+YGR F + D
Sbjct: 5 PFPVLIGRHKVPKDRYGVPSSFPAVVMELSDNEIKDYFTPKDFMVGQTVSLYGRRFLVYD 184
Query: 184 ADSFTREFMAARGKEQGGPLPYPGDPVDVYRATFGMNRGRAPQAREDSPGSTTRRVNDFK 243
D+FT+ F Y FG+ + G + +
Sbjct: 185 TDNFTKAF---------------------YYHNFGITDFPKVDTAGNGKGLPKMEIPPYN 301
Query: 244 AY--VEARLGKPSHLLDGDRLRQF---LENNKKVLRFWCVWDERTTMYGDRRPYVLHYYL 298
+ +E L L+ + F LEN+ KVLRF + D RR +++ Y L
Sbjct: 302 NFGSLEDSLQSCLSLIPQPPKKDFIKMLENDHKVLRFEAIMDSLRPEDSGRR-FIISYRL 478
Query: 299 EDDSVEVLEINENNSGRDPFPVFLKRGPLPKVAVKTNTTLNPKFRKDQCYNAGDFRLGLF 358
DD + V E NSG FL+R +VA + P + Y DF +G
Sbjct: 479 ADDMLTVYEPQVRNSGIIGGK-FLERT---RVAKPGSAPDRPDY-----YGPQDFFIGAV 631
Query: 359 INVLGRDFYLHDADTFTKQWYKDN 382
I + F + +AD F + +++
Sbjct: 632 IEIFNHRFVITNADAFVLSYMEEH 703
>18545
Length = 478
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 4/155 (2%)
Frame = -1
Query: 27 FKKGQTLTYVNGYQR-EDALAQVKDLPERIAQATDGALASGAMGTGVLPASMMQDTATK- 84
F +L Y NGY + A + P Q L A L + +
Sbjct: 466 FHLSHSLCYKNGYALPKRAECGIGGKPINFNQLDQADLDQLASFNPTLTYGQAKQAPPED 287
Query: 85 -LPQWVENDRKVLRFYGYFKESVVESNMENHRIRKVILYYYLEDDSMHVAEPRQDNSGIP 143
+P V D+KVL+F Y+K++V ES E R+R V +YYYLEDDS+ V EP +NSG+P
Sbjct: 286 FIPAHVAWDKKVLKFNAYYKQTVHESQNEYFRVRPVDIYYYLEDDSIAVIEPHVENSGMP 107
Query: 144 QGVFIKRHRVTRDD-GSFFNPGDFSVGDTVSIYGR 177
QG IKR R+ ++D G ++ D + G V+ YG+
Sbjct: 106 QGKLIKRQRLPKNDRGDXWHWKDINNGQNVTFYGK 2
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%)
Frame = -1
Query: 430 PPKRDLHKLMNKDKIILRFVVKMVDTDTHKHSATDLARRFILSYFMMDDSNLIFEPPVRN 489
PP+ + + DK +L+F T + R + Y++ DDS + EP V N
Sbjct: 298 PPEDFIPAHVAWDKKVLKFNAYYKQTVHESQNEYFRVRPVDIYYYLEDDSIAVIEPHVEN 119
Query: 490 TGIAGGKFLERQKIYKPRSEEIYTYLDLYVGATIEVFNR 528
+G+ GK ++RQ++ K + + + D+ G + + +
Sbjct: 118 SGMPQGKLIKRQRLPKNDRGDXWHWKDINNGQNVTFYGK 2
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = -1
Query: 269 NKKVLRFWCVW----DERTTMYGDRRPYVLHYYLEDDSVEVLEINENNSGRDPFPVFLKR 324
+KKVL+F + E Y RP ++YYLEDDS+ V+E + NSG P +KR
Sbjct: 262 DKKVLKFNAYYKQTVHESQNEYFRVRPVDIYYYLEDDSIAVIEPHVENSGM-PQGKLIKR 86
Query: 325 GPLPK 329
LPK
Sbjct: 85 QRLPK 71
>15966
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +2
Query: 579 AADKSGSGALTGDDLEAGLQSAGLKFTRHQAISLKRRLDKNKTGTISIEEFL 630
A DKSG G L D+L+A L +G KFT ++ + DKN I EEF+
Sbjct: 158 AKDKSGDGYLDRDELKALLDESGQKFTADDVSAILKSADKNNDNKICFEEFV 313
>01773
Length = 1950
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +1
Query: 579 AADKSGSGALTGDDLEAGLQSAGLKFTRHQAISLKRRLDKNKTGTISIEEFL 630
A DKSG G L D+L+A L +G KFT ++ + DKN I EEF+
Sbjct: 391 AKDKSGDGYLDRDELKALLDESGQKFTADDVSAILKSADKNNDNKICFEEFV 546
>14594
Length = 1014
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 581 DKSGSGALTGDDLEAGLQSAGLKFTRHQAISLKRRLDKNKTGTISIEEFLGLLG 634
DK G G +T +L ++S G T ++ + +D + GTI EEFL ++
Sbjct: 471 DKDGDGTITTSELGTVMRSLGQNPTENELQDMINEVDADGNGTIDFEEFLHMMA 632
>14945
Length = 1337
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +1
Query: 573 VRSSVIAADKSGSGALTGDDLEAGLQSAGLKFTRHQAISLKRRLDKNKTGTISIEEFLGL 632
+R + D GSG + +L+ +++ G + + + + +DK TGTI +FL +
Sbjct: 118 IREAFDLFDADGSGTIDAKELKVAMRALGFEPKKEEIKKMIAEIDKEGTGTIDFNDFLTI 297
Query: 633 L 633
+
Sbjct: 298 M 300
>22063
Length = 688
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +3
Query: 573 VRSSVIAADKSGSGALTGDDLEAGLQSAGLKFTRHQAISLKRRLDKNKTGTISIEEFLGL 632
+R + D GSG + +L+ +++ G + + + + +DK TGTI +FL +
Sbjct: 177 IREAFDLFDADGSGTIDAKELKVAMRALGFEPKKEEIKKMIAEIDKEGTGTIDFNDFLTI 356
Query: 633 L 633
+
Sbjct: 357 M 359
>11285
Length = 841
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 177 RNFYLVDADSFTREFMAARGKEQGGPLPYPGDPVDVYRATFGM 219
+ + +D D +A + +E GG PGD VD + FG+
Sbjct: 200 QRLHWIDKDKLQVFMLACQDEETGGFADRPGDMVDPFHTLFGL 328
>07198
Length = 1675
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -3
Query: 614 RRLDKNKTGTISIEEFL 630
R+ DKNK GTIS+EEF+
Sbjct: 359 RQSDKNKDGTISMEEFM 309
>00167
Length = 2176
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 588 LTGDDLEAGLQSAGL-KFTRHQAISLKRRLDKNKTGTISIEEFL 630
L+ D+ G + + K T + + RR DK+ TGT+ EEFL
Sbjct: 780 LSVDEFIVGCRECRIAKMTSEELNEVFRRFDKDGTGTLDFEEFL 911
>31819
Length = 716
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 49/138 (35%), Gaps = 7/138 (5%)
Frame = +1
Query: 458 HKHSATDLARRFILSYFMMDDSNLIFEPPVRNTGIAGGKFLERQKIYKPRSEEIYTYLDL 517
HK + DL RF P+ N K LE K+ ++EE+ Y
Sbjct: 64 HKMTVGDLQTRF----------------PLVNWVQFMNKLLESTKVRINKTEEVVVYAPR 195
Query: 518 YVGATIEVFNRTFELLEADEYTLTYMENYKDIFVMADTDVLIRSLK-------AQVSGKE 570
Y+ + N T LE Y+E + +++ R K + V+GKE
Sbjct: 196 YLEKLTVILNDTLSTLEGRRAVNLYLEWHVVKQLISYLSKPFREAKKAFSEVLSGVTGKE 375
Query: 571 DAVRSSVIAADKSGSGAL 588
D R + D AL
Sbjct: 376 DEWRDCITDTDSVVGFAL 429
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158276114|gb|EDP01888.1| ubiquitin-activating enzyme
E1 [Chlamydomonas reinhardtii]
(1061 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
19711 157 2e-60
25566 227 2e-59
21876 183 3e-46
34235 118 3e-36
06604 110 2e-24
21008 104 2e-22
00369 99 9e-21
20367 65 2e-10
14935 33 0.63
>19711
Length = 1114
Score = 157 bits (397), Expect(2) = 2e-60, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 123/209 (58%), Gaps = 1/209 (0%)
Frame = +2
Query: 359 AGSAARLEAVDGAVVGKLAHCAGAEVSPMAALFGGVVGQEVVKAVSGKFHPVFQWLYFDS 418
AG+ A E V+ +V L+H A ++P+ A GG+V QE +KA++GKF P+ QWLY D+
Sbjct: 524 AGTEA--EEVEEKIVRCLSHTARGSLAPLCAAMGGIVAQEGLKALTGKFLPLSQWLYLDA 697
Query: 419 LESLPEPEQLAAAGPEEYAPLGCRYDPQIAVFGRTMQRRLSQLQLFLVGAGALGCEFLKN 478
+E++PE L+ PE + R DP G + ++L+ +LF+VG GA+GCE LKN
Sbjct: 698 METIPE---LSVTSPEAFQLRNDRLDPLRICVGEDVCQKLADTRLFMVGCGAIGCEMLKN 868
Query: 479 FACMGVACGPLPGADAASTGRLTVTDDDVIEKSNLSRQFLFRDWDIGXXXXXXXXXXXQR 538
+A +G+ G G++T+TD+D+IEKSNL+RQFLFR I
Sbjct: 869 YALLGLGAG--------QKGQITITDNDLIEKSNLNRQFLFRSHHIQKPKSTTAAQSVLD 1024
Query: 539 INPGLAVTPLQNRVSPDTESV-FDDKFWQ 566
INP L + QN+V P TES + D F++
Sbjct: 1025INPALHIQAQQNKVCPQTESTHYPDAFFE 1111
Score = 95.5 bits (236), Expect(2) = 2e-60, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 78/152 (51%), Gaps = 1/152 (0%)
Frame = +3
Query: 187 DFGPAFTVYDVNGEEPHSGIVASVSSGSPAMVTCVEDERLEFQDGELVSFSEVVGMDKLN 246
DFG F V D GEE +A+++ +P +VTC+++ + G+LV+F EV GM++LN
Sbjct: 6 DFGDTFEVMDPTGEEAKEVFIANITKANPGVVTCLDNLLHGLETGDLVTFKEVKGMEQLN 185
Query: 247 THGPFKVKNCKAHSFEI-EADTSSWGEYVRGGIVVQVXXXXXXXXXXXXQALTEPGEFLL 305
+ +K +F I S +G Y GGI+ QV + L P L+
Sbjct: 186 SQ-QCAIKVLSPTTFSICNTSGSEFGAYESGGIISQVKVPKSVHFKSLEEQLVSPS-LLM 359
Query: 306 TDFSKLDRPGQLHVAFQALDAFEAEHGRSPRP 337
D K PG +HVAFQAL F AE G P+P
Sbjct: 360 PDLCKFTAPGNIHVAFQALHQFWAETGSLPQP 455
>25566
Length = 1639
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 159/465 (34%), Positives = 235/465 (50%), Gaps = 8/465 (1%)
Frame = +2
Query: 600 TLGPKCNTQMVIPRLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKA 659
T+G K + Q++IP LTE+Y + +DP ++ P CTV SFP I+HC+ WAR +FE L
Sbjct: 2 TMGTKGHVQVIIPHLTESYTSQQDPADEDYPYCTVKSFPATIEHCIQWARDKFEELYVNQ 181
Query: 660 PREAASFLAAPADYAKAVRANPDASARQQLEAVAEVLLDGRAADFNACVAWARGRFQDYF 719
P FLA+ AD V V++ + R + CV AR RF+ YF
Sbjct: 182 PNLFNKFLASNADMTAVVHKLKSGDVVDGGLRVSK-MAATRPHSWEDCVRLARIRFEKYF 358
Query: 720 HNRIAQLTYTFPEDATTSTGAPFWSAPKRFPRPLNFDPKDPAHAAFVQAGAILRAEVFGI 779
+++ QL + FP D + FW +PKR P PL F+ DP H FV + A L +++ I
Sbjct: 359 NHKARQLLHAFPLDIKLPDNSLFWQSPKRPPTPLQFNADDPLHMTFVTSTARLLCDIYAI 538
Query: 780 PRPDWXXXXXXXXXXXXXXDIPAFVPRAGVQIETDPKADRTKPAGADKTHDDEAVIEGLL 839
+PAFVP + +IETD +++ ++ DE G
Sbjct: 539 SY-STQVSTDSIKTILHAVTVPAFVP-SDKKIETD--ETKSQQEAEPQSSGDEVTAAG-- 700
Query: 840 GRLEGAV-PGLAKEGFK-LSPIQFEKDDDGNFHMDLIAGLANMRARNYSIPEVDKLKAKL 897
RL V A+ + ++ ++FEKDDD N H++ IA +NMRA+ YSI VD+LK K
Sbjct: 701 ERLAQVVMSSQAQSALQPMAALEFEKDDDSNDHINFIAACSNMRAQMYSIENVDRLKIKR 880
Query: 898 XXXXXXXXXXXXXXXXXGLVCLELYKAVLPGKKLEAYRNTFANLALPLFAMAEP-IPPKS 956
GLV +EL K VL + L+A++N F NLALP+ ++EP +
Sbjct: 881 IAGRIVPAIATTTAAVSGLVTIELIK-VLQQRPLDAFKNAFLNLALPMLLLSEPGACARK 1057
Query: 957 TTYNDLTWSLWDRWTLEG--DLTVQQVLDWFSAK---GLNAYSISCGPALLYNNIFPKHV 1011
L+ S+WD+WT+ G D T+QQ LD S K G A ++ G ++Y I P H
Sbjct: 1058 VLKEGLSVSVWDKWTIRGKQDFTLQQFLD--SCKDSFGFEATAVVNGVKIIYMPIMPPHK 1231
Query: 1012 ERLGKKMSELVVSVAKMELPANRDHFDVVVACEDDNDEDLDVPLV 1056
+RL + M +L+ + + D+VV EDD E+++ P V
Sbjct: 1232 KRLPQTMMKLIKPEPGIT------YVDLVVCFEDDKGEEIEGPPV 1348
>21876
Length = 894
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 166/310 (53%), Gaps = 12/310 (3%)
Frame = -1
Query: 30 DGAHVEIDENLHSRQLAVYGREAMKRMATSSVLIC----GANGLGVEVAKNVILAGVRGV 85
+GA +IDE L G EAM++MA L C GLG+E+AKNV+L GV+ V
Sbjct: 894 NGAADDIDEGLVXSPAVCAGHEAMRKMAK---LQCSDLWAMGGLGIEIAKNVVLGGVKSV 724
Query: 86 TVHDTAKVALTDLSAQFYLTEQDVGRNRAEACREKLQELNTGVAVHAASGELTDAFVRQF 145
++HD KV DLS+QF+L ++DVG+NRAE + +L ELN+ V + +++G+ + Q
Sbjct: 723 SIHDPGKVVFGDLSSQFFLRDEDVGKNRAEVSQPRLAELNSYVPISSSTGDFG*GLLVQV 544
Query: 146 ------QVVVATTAPLAEAKRLDA-LCHAAGTAF-IWAQTRGVFARVFTDFGPAFTVYDV 197
Q+ V T P L H A+ +W DFG F + D
Sbjct: 543 SGGSTDQLFVR*TDPCGRVLSLSQHQVHCGRNAWTVWEN--------LLDFGSNFVITDG 388
Query: 198 NGEEPHSGIVASVSSGSPAMVTCVEDERLEFQDGELVSFSEVVGMDKLNTHGPFKVKNCK 257
+GE+P S ++A + G ++V V++ + +DG+ V+F EV GM +LN P K+K
Sbjct: 387 DGEQPISCMIADIEKGDNSVVATVDETKHGLEDGDYVTFKEVQGMTELNGCKPVKIKVLG 208
Query: 258 AHSFEIEADTSSWGEYVRGGIVVQVXXXXXXXXXXXXQALTEPGEFLLTDFSKLDRPGQL 317
++F I DT+ + +Y+RGG QV A+ P E L +DF+K DRP QL
Sbjct: 207 PYTFSI-GDTTKYADYIRGGTATQVKMPKTINFKSIKAAMDAP-EILPSDFAKFDRPPQL 34
Query: 318 HVAFQALDAF 327
H+AF+AL +
Sbjct: 33 HIAFKALSEY 4
>34235
Length = 1026
Score = 118 bits (295), Expect(2) = 3e-36, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 106/215 (49%), Gaps = 1/215 (0%)
Frame = -1
Query: 742 FWSAPKRFPRPLNFDPKDPAHAAFVQAGAILRAEVFGIPRPDWXXXXXXXXXXXXXXDIP 801
FWS PKR P L FD + H +++A A ++ + G+P +P
Sbjct: 876 FWSGPKRCPHALEFDADNELHLDYIEAAANMKGFMCGLPP---VRDRAAIKDMVSKVMVP 706
Query: 802 AFVPRAGVQIETDPKADRTKPAGADKTHDDEAVIEGLLGRLEGAVPGLAK-EGFKLSPIQ 860
FVPR+G++I D AG + D + V +L+ A+P + +G +L+ +
Sbjct: 705 EFVPRSGIKIAV---TDAEAQAGNNDNFDKDTV-----EKLKSALPSPDELKGRQLNAVD 550
Query: 861 FEKDDDGNFHMDLIAGLANMRARNYSIPEVDKLKAKLXXXXXXXXXXXXXXXXXGLVCLE 920
FEKDDD NFHMD I +N+RA NYSIP D+ K+KL GLV LE
Sbjct: 549 FEKDDDTNFHMDFITAASNLRAENYSIPPADRHKSKLIAGRIIPAIATTTAMVVGLVGLE 370
Query: 921 LYKAVLPGKKLEAYRNTFANLALPLFAMAEPIPPK 955
L K +E ++N FANLALPL + + P+
Sbjct: 369 LIKLAQGHTNVERFKNGFANLALPLRLLRTHLGPQ 265
Score = 53.5 bits (127), Expect(2) = 3e-36, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = -3
Query: 704 FNACVAWARGRFQDYFHNRIAQLTYTFPEDATTSTGAPF 742
F+ CV WAR FQ + N+I QL + FP D TS+GAPF
Sbjct: 991 FDKCVEWARNLFQTNYSNQIKQLLFNFPSDQMTSSGAPF 875
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Frame = -2
Query: 943 LPLFAMAEPIPPKSTTYNDLTWSLWDRWTLEGDLTVQQVLDWFSAK-GLNAYSISCGPAL 1001
L LFA +EPI + Y + ++LWDR+T++G++T+QQ LD+F + GL +S G L
Sbjct: 305 LSLFAFSEPILAPKSKYYEKEFTLWDRFTVQGEITLQQFLDYFQKEHGLEITMLSQGVCL 126
Query: 1002 LYNNIF--PKHVERLGKKMSELVVSVAKMELP 1031
L++N K ER +SELV V+K ++P
Sbjct: 125 LFSNFMQPAKQEERKNLLISELVKKVSKKKIP 30
>06604
Length = 1748
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 89/153 (58%), Gaps = 3/153 (1%)
Frame = -2
Query: 40 LHSRQLAVYGREAMKRMATSSVLICGANGLGVEVAKNVILAGVRGVTVHDTAKVALTDLS 99
L+ RQ+ ++G +A +R+ +SVL+ G GLG EVAKN++LAG++ +T+ D + D +
Sbjct: 1732 LYDRQIRLWGLDAQRRLRAASVLLVGVRGLGAEVAKNIVLAGIKSLTLLDPSLADEEDTA 1553
Query: 100 AQFYLTEQDVGRNRAEACREKLQELNTGVAVHAASGELTDA---FVRQFQVVVATTAPLA 156
AQF + ++G+NRAEA E+ Q LN V V A + + D FV F VV AT ++
Sbjct: 1552 AQFLIPRSEIGKNRAEASLERTQLLNPMVTVTADTCSIDDKDDDFVTSFDVVCATGCGVS 1373
Query: 157 EAKRLDALCHAAGTAFIWAQTRGVFARVFTDFG 189
+RLD +C AG F G + +F D G
Sbjct: 1372 TLRRLDRVCRDAGVMFYAGDVFGFYGYMFADLG 1274
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 59/146 (40%)
Frame = -2
Query: 443 YDPQIAVFGRTMQRRLSQLQLFLVGAGALGCEFLKNFACMGVACGPLPGADAASTGRLTV 502
YD QI ++G QRRL + LVG LG E KN G+ LT+
Sbjct: 1729 YDRQIRLWGLDAQRRLRAASVLLVGVRGLGAEVAKNIVLAGIKS-------------LTL 1589
Query: 503 TDDDVIEKSNLSRQFLFRDWDIGXXXXXXXXXXXQRINPGLAVTPLQNRVSPDTESVFDD 562
D + ++ + + QFL +IG Q +NP + VT + S D + DD
Sbjct: 1588 LDPSLADEEDTAAQFLIPRSEIGKNRAEASLERTQLLNPMVTVTA--DTCSIDDK---DD 1424
Query: 563 KFWQGLDLVVNALDNVNARLYVDSRC 588
F D+V V+ +D C
Sbjct: 1423 DFVTSFDVVCATGCGVSTLRRLDRVC 1346
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 29/40 (72%)
Frame = -3
Query: 378 HCAGAEVSPMAALFGGVVGQEVVKAVSGKFHPVFQWLYFD 417
+C G ++SP+ A+ GG++GQE++KAVS K P + +++
Sbjct: 894 YCFG-QLSPVCAVVGGILGQEIIKAVSQKDIPHNNFFFYN 778
>21008
Length = 408
Score = 104 bits (259), Expect = 2e-22, Method: Composition-based stats.
Identities = 53/102 (51%), Positives = 71/102 (69%), Gaps = 2/102 (1%)
Frame = +3
Query: 31 GAHVEIDENLHSRQLAVYGREAMKRMATSSVLICGANGLGVEVAKNVILAGVRGVTVHDT 90
+ +EID++L+SRQ V G AMKRMA SSVLI G GLG+E+AKN++LAGV+ +TV D+
Sbjct: 102 ASDMEIDDSLYSRQRYVLGDSAMKRMAQSSVLIHGLGGLGIEIAKNIVLAGVKSLTVQDS 281
Query: 91 AKVALTDLSAQFYLTEQDV--GRNRAEACREKLQELNTGVAV 130
+DL QF++ + DV +NRAEAC KL ELN V +
Sbjct: 282 KTSCTSDLGTQFFVRQADVDAAKNRAEACAGKLAELNPYVKI 407
>00369
Length = 1082
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Frame = +3
Query: 462 QLFLVGAGALGCEFLKNFACMGVACGPLPGADAASTGRLTVTDDDVIEKSNLSRQFLFRD 521
+L ++GAG LGCE LK+ A MG + V D D I+ SNL+RQFLFR
Sbjct: 222 KLLVIGAGGLGCELLKDLALMGFF-------------DIHVIDMDTIDVSNLNRQFLFRP 362
Query: 522 WDIGXXXXXXXXXXXQRINPGLAVTPLQNRVSPDTESVFDDKFWQGLDLVVNALDNVNAR 581
D+G PG VTP ++ +D+ F++G ++V LD++ AR
Sbjct: 363 KDVGSPKAEVAAAFINSRVPGCKVTPHFAKIQD-----YDESFYRGFHVIVCGLDSIIAR 527
Query: 582 LYVDSRCVYFGK------------PLLESGTLGPKCNTQMVIPRLTENYGASRD--PPEK 627
+++S + PL++ GT G K N ++V+P +T + D PP+
Sbjct: 528 RWINSMLISLLNYEDGELDQSSIIPLVDGGTEGFKGNARVVLPGITACIECTLDLYPPQV 707
Query: 628 QAPMCTVHSFPHNIDHCLTWAR 649
P+CT+ P +HC+ + R
Sbjct: 708 NFPLCTIAHTPRLPEHCIEYVR 773
>20367
Length = 859
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Frame = -1
Query: 39 NLHSRQLAVYGREAMKRMATSSVLICGANGLGVEVAKNVILAGVRGVTVHDTAKVALTDL 98
N + RQL ++G + T+ V + A G E+ KNVIL G+ T+ D KV D+
Sbjct: 820 NKYDRQLRLWGDHGQSALETARVCLINATATGTEILKNVILPGIGSFTIVDGNKVQGEDV 641
Query: 99 SAQFYLTEQDVGRNRAEACREKLQELN---TGVAVHAASGELTDA---FVRQFQVVVAT 151
F+L +G++RA+ E L ELN TG V L ++ F F +V+AT
Sbjct: 640 GNNFFLQVDSIGKSRAQVATELLGELNDDVTGNFVEENVENLLESNADFFTTFSIVIAT 464
Score = 33.5 bits (75), Expect = 0.44, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 37/84 (44%)
Frame = -1
Query: 442 RYDPQIAVFGRTMQRRLSQLQLFLVGAGALGCEFLKNFACMGVACGPLPGADAASTGRLT 501
+YD Q+ ++G Q L ++ L+ A A G E LKN LPG G T
Sbjct: 817 KYDRQLRLWGDHGQSALETARVCLINATATGTEILKNVI--------LPG-----IGSFT 677
Query: 502 VTDDDVIEKSNLSRQFLFRDWDIG 525
+ D + ++ ++ F + IG
Sbjct: 676 IVDGNKVQGEDVGNNFFLQVDSIG 605
>14935
Length = 378
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -2
Query: 614 LTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLL-EKAPREAAS 665
LTE Y +K P CT+ + P HC+ WA+ F L E+ P + S
Sbjct: 377 LTECYECQPKAAQKSFPGCTIRNTPSEPIHCVVWAKHLFNQLFGEEDPDQDVS 219
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= jgi|Chlre3|144289|Chlre2_kg.scaffold_10000169
(2315 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01973 229 7e-60
01895 226 6e-59
>01973
Length = 1063
Score = 229 bits (585), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 188/335 (56%), Gaps = 13/335 (3%)
Frame = +3
Query: 1506 TDVFNIKAPDVGDLKKLRLYHDNKGLGAAWHCEIVIITNKERRRTWYFY-CGQWLDKRTG 1564
+D F +KA VG +KK+R+ HDN G+G+ W+ E V++T+ + YF+ CGQWL K G
Sbjct: 6 SDTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPCGQWLAKSEG 185
Query: 1565 ---VEKILFASDTDPRA--HLVTYSVTVHTSDIKGAGTDANVCLEMFGAKGSSGVRELTG 1619
+ + L S DP A Y VTV T + KGAGTDANV + MFG G SG ++L+
Sbjct: 186 DGAISRDLIGS-RDPLATRKASKYKVTVFTGNKKGAGTDANVYITMFGEFGDSGEKKLSS 362
Query: 1620 KGNLFEQGKSDKFIFKMADLGDLSELEIWHDGKGFGAGWHLDFVEVHSSATGKVYYFPCG 1679
+ N FE+GKSD+F+ + LG L + I HD GFG GW LD V V G V+ FPC
Sbjct: 363 RKNNFERGKSDEFLLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTVFEFPCC 542
Query: 1680 RWLAEDEDDGAIRRRLQVS----HKDPRTFKAQYRVSVTTSDIRGAGTDANVFIQLYG-- 1733
RW A+DEDDG I R L ++ P Y ++V T D+R AGTD++V+I L+G
Sbjct: 543 RWFAKDEDDGQISRELVLNVGPMDSSPGVGGIPYLITVCTGDVRSAGTDSHVYIVLHGGE 722
Query: 1734 DAGETARIKLDNPGKNDFERGCTDVFLFEDRN-VGGIKKIRIGHDGAGLGSGWHLQRVVV 1792
ET+ GK F+RG TD+F + + + + I IGHD G GW L V V
Sbjct: 723 KGNETSGKIWLETGK--FQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLDSVTV 896
Query: 1793 ENLTTGQVVVFDVNRWFDKGEDDGAIERELFPTSG 1827
G VF N+WF E DG I+R L+ +G
Sbjct: 897 YCPMAGIEQVFSCNKWFATDEGDGLIQRTLYEQTG 1001
Score = 209 bits (531), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/334 (37%), Positives = 185/334 (55%), Gaps = 13/334 (3%)
Frame = +3
Query: 1375 QTDTYQIAGRDVGPMKKIRIGHDNSGLGPAWHLNRVEVTNLKTGEHR-IFPANKWFSKTD 1433
+DT+++ VGPMKKIRI HDN+G+G W+L RV VT+L + + FP +W +K++
Sbjct: 3 SSDTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPCGQWLAKSE 182
Query: 1434 DDYQIERDLFPGDAPDLN---VEYEVVVITSNIPGAGTDANVFVQMFGTEGKWRRPCEAG 1490
D I RDL P +Y+V V T N GAGTDANV++ MFG G ++G
Sbjct: 183 GDGAISRDLIGSRDPLATRKASKYKVTVFTGNKKGAGTDANVYITMFGEFG------DSG 344
Query: 1491 PLRLDNPKNNFEAGDTDVFNIKAPDVGDLKKLRLYHDNKGLGAAWHCEIVIITNKERRRT 1550
+L + KNNFE G +D F ++ P +G L+++R+ HDN G G W + VI+ + +
Sbjct: 345 EKKLSSRKNNFERGKSDEFLLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTV 524
Query: 1551 WYFYCGQWL-----DKRTGVEKILFAS--DTDPRAHLVTYSVTVHTSDIKGAGTDANVCL 1603
+ F C +W D + E +L D+ P + Y +TV T D++ AGTD++V +
Sbjct: 525 FEFPCCRWFAKDEDDGQISRELVLNVGPMDSSPGVGGIPYLITVCTGDVRSAGTDSHVYI 704
Query: 1604 EMFGA-KGSSGVRELTGKGNLFEQGKSDKF-IFKMADLGDLSELEIWHDGKGFGAGWHLD 1661
+ G KG+ ++ + F++G +D F + M+ L LS ++I HD KG GW LD
Sbjct: 705 VLHGGEKGNETSGKIWLETGKFQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLD 884
Query: 1662 FVEVHSSATGKVYYFPCGRWLAEDEDDGAIRRRL 1695
V V+ G F C +W A DE DG I+R L
Sbjct: 885 SVTVYCPMAGIEQVFSCNKWFATDEGDGLIQRTL 986
Score = 202 bits (515), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 121/331 (36%), Positives = 177/331 (53%), Gaps = 10/331 (3%)
Frame = +3
Query: 1123 DEFEIKAPDLGALTEITIGHDNAGYGPNWHLEQVEITDTKINQ-TWYFECNKWFDAKEGD 1181
D F +KA +G + +I I HDN G G W+LE+V +TD Q ++F C +W EGD
Sbjct: 9 DTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPCGQWLAKSEGD 188
Query: 1182 CKLERVLFPSLQNPRSQR--TLYKVRVKTSDRSGAGTDANVYVDIRGDSASTGKTFLKNR 1239
+ R L S ++P + R + YKV V T ++ GAGTDANVY+ + G+ +G+ L +R
Sbjct: 189 GAISRDLIGS-RDPLATRKASKYKVTVFTGNKKGAGTDANVYITMFGEFGDSGEKKLSSR 365
Query: 1240 NLNNFERGNSDDFEITCRPLGRLTELLVGHDNSGMGASWHLEHVEVYDSTTGVTWYFECN 1299
NNFERG SD+F + C LGRL + +GHDNSG G W L+ V V D G + F C
Sbjct: 366 K-NNFERGKSDEFLLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTVFEFPCC 542
Query: 1300 AWLSATEEDCRLERVLPASL----DDPAXXXXXXXXXXXXSDKMGAGTDANVFIDIFGMD 1355
W + E+D ++ R L ++ P D AGTD++V+I + G +
Sbjct: 543 RWFAKDEDDGQISRELVLNVGPMDSSPGVGGIPYLITVCTGDVRSAGTDSHVYIVLHGGE 722
Query: 1356 GTH--TGRMLLNNKGNDFERGQTDTYQI-AGRDVGPMKKIRIGHDNSGLGPAWHLNRVEV 1412
+ +G++ L F+RG TD + + + P+ I IGHDN G P W L+ V V
Sbjct: 723 KGNETSGKIWLET--GKFQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLDSVTV 896
Query: 1413 TNLKTGEHRIFPANKWFSKTDDDYQIERDLF 1443
G ++F NKWF+ + D I+R L+
Sbjct: 897 YCPMAGIEQVFSCNKWFATDEGDGLIQRTLY 989
Score = 199 bits (506), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/324 (38%), Positives = 183/324 (56%), Gaps = 11/324 (3%)
Frame = +3
Query: 1629 SDKFIFKMADLGDLSELEIWHDGKGFGAGWHLDFVEVHS-SATGKVYYFPCGRWLAEDED 1687
SD F K +G + ++ I HD G G+GW+L+ V V T Y+FPCG+WLA+ E
Sbjct: 6 SDTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPCGQWLAKSEG 185
Query: 1688 DGAIRRRLQVSHKDPRTFK--AQYRVSVTTSDIRGAGTDANVFIQLYGDAGETARIKLDN 1745
DGAI R L + +DP + ++Y+V+V T + +GAGTDANV+I ++G+ G++ KL +
Sbjct: 186 DGAISRDL-IGSRDPLATRKASKYKVTVFTGNKKGAGTDANVYITMFGEFGDSGEKKLSS 362
Query: 1746 PGKNDFERGCTDVFLFEDRNVGGIKKIRIGHDGAGLGSGWHLQRVVVENLTTGQVVVFDV 1805
KN+FERG +D FL E +G ++++RIGHD +G G GW L +V+V+++ G V F
Sbjct: 363 R-KNNFERGKSDEFLLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTVFEFPC 539
Query: 1806 NRWFDKGEDDGAIERELFPTSGGGDGS----STNWRLVVVTANVSGAGTDADVYVQLNGD 1861
RWF K EDDG I REL G D S + + V T +V AGTD+ VY+ L+G
Sbjct: 540 CRWFAKDEDDGQISRELVLNVGPMDSSPGVGGIPYLITVCTGDVRSAGTDSHVYIVLHGG 719
Query: 1862 KA---SFGPYTLPASKEAFETGSTDTFSL-TTPELGRIQTLTIGHNNKGFGAAWCLSRVE 1917
+ + G L K F+ G TD F++ L + + IGH+NKG W L V
Sbjct: 720 EKGNETSGKIWLETGK--FQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLDSVT 893
Query: 1918 LENMNTGERYLWNFDNAWLDTEHG 1941
+ G +++ N W T+ G
Sbjct: 894 VYCPMAGIEQVFSC-NKWFATDEG 962
Score = 196 bits (499), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 119/330 (36%), Positives = 175/330 (53%), Gaps = 17/330 (5%)
Frame = +3
Query: 1003 DDFKVQCRNLGPLKAVRVWHD--GKGTPWHLDMIVIT--LATGEKYYFPYANWLGQETPT 1058
D F+V+ +GP+K +R+ HD G G+ W+L+ +V+T T KY+FP WL +
Sbjct: 9 DTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPCGQWLAKSEGD 188
Query: 1059 VEIPASL---QDPTADRRV--YKVVVRTSDLPGAGTDANVYLEMRGTRANLPRHFLRNKA 1113
I L +DP A R+ YKV V T + GAGTDANVY+ M G + L ++
Sbjct: 189 GAISRDLIGSRDPLATRKASKYKVTVFTGNKKGAGTDANVYITMFGEFGDSGEKKLSSRK 368
Query: 1114 VNLFERGQVDEFEIKAPDLGALTEITIGHDNAGYGPNWHLEQVEITDTKINQTWYFECNK 1173
N FERG+ DEF ++ P LG L + IGHDN+G+GP W L++V + D + + F C +
Sbjct: 369 NN-FERGKSDEFLLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTVFEFPCCR 545
Query: 1174 WFDAKEGDCKLERVLF----PSLQNPRSQRTLYKVRVKTSDRSGAGTDANVYVDIRG--- 1226
WF E D ++ R L P +P Y + V T D AGTD++VY+ + G
Sbjct: 546 WFAKDEDDGQISRELVLNVGPMDSSPGVGGIPYLITVCTGDVRSAGTDSHVYIVLHGGEK 725
Query: 1227 DSASTGKTFLKNRNLNNFERGNSDDFEITCRP-LGRLTELLVGHDNSGMGASWHLEHVEV 1285
+ ++GK +L+ F+RG +D F + L L+ + +GHDN G W L+ V V
Sbjct: 726 GNETSGKIWLET---GKFQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLDSVTV 896
Query: 1286 YDSTTGVTWYFECNAWLSATEEDCRLERVL 1315
Y G+ F CN W + E D ++R L
Sbjct: 897 YCPMAGIEQVFSCNKWFATDEGDGLIQRTL 986
Score = 182 bits (463), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 166/340 (48%), Gaps = 14/340 (4%)
Frame = +3
Query: 242 DLFIIPCKNVGMPNHIKVWHDNTGKRPDWFLEWIRIRKKGAINWT-VFPCQRWFSTQLDD 300
D F + VG I++ HDNTG W+LE + + W FPC +W + D
Sbjct: 9 DTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPCGQWLAKSEGD 188
Query: 301 CRISRILFAGHATPYI-----QYKVTTLTSDIRGAGTDANVHFVMHGTLGDGTRHILSSG 355
ISR L G P +YKVT T + +GAGTDANV+ M G GD LSS
Sbjct: 189 GAISRDLI-GSRDPLATRKASKYKVTVFTGNKKGAGTDANVYITMFGEFGDSGEKKLSSR 365
Query: 356 QDDFERGMVNXXXXXXXXXXXXXXVTIGHDNTGNGPSWHLDHLTVTNLKTGAIYLFPCRM 415
+++FERG + V IGHDN+G GP W LD + V ++ G ++ FPC
Sbjct: 366 KNNFERGKSDEFLLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTVFEFPCCR 545
Query: 416 WFDSRIGDGALER--TLEVG--DSLLKI--TPYHFYVTTSEIRGAGTDADVFVVLH-GEF 468
WF DG + R L VG DS + PY V T ++R AGTD+ V++VLH GE
Sbjct: 546 WFAKDEDDGQISRELVLNVGPMDSSPGVGGIPYLITVCTGDVRSAGTDSHVYIVLHGGEK 725
Query: 469 GDTPSTILPSQLEHFERGQTDHFRLE-LPHVGKLRAMTIGHNNKGEGPDWHLLMVEVREE 527
G+ S + + F+RG TD F ++ + + L + IGH+NKG P W L V V
Sbjct: 726 GNETSGKIWLETGKFQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLDSVTVYCP 905
Query: 528 LDGTDGELGPITRFVCNKWIGLGHPDPDSGSEEGVLQRTL 567
+ G + F CNKW D G++QRTL
Sbjct: 906 MAGIE------QVFSCNKWFATDEGD-------GLIQRTL 986
Score = 174 bits (440), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 174/321 (54%), Gaps = 9/321 (2%)
Frame = +3
Query: 1248 NSDDFEITCRPLGRLTELLVGHDNSGMGASWHLEHVEVYD-STTGVTWYFECNAWLSATE 1306
+SD F + +G + ++ + HDN+G+G+ W+LE V V D T ++F C WL+ +E
Sbjct: 3 SSDTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPCGQWLAKSE 182
Query: 1307 EDCRLERVLPASLDDPAXXXXXXXXXXXXS-DKMGAGTDANVFIDIFGMDGTHTGRMLLN 1365
D + R L S D A + +K GAGTDANV+I +FG G +G L+
Sbjct: 183 GDGAISRDLIGSRDPLATRKASKYKVTVFTGNKKGAGTDANVYITMFGEFG-DSGEKKLS 359
Query: 1366 NKGNDFERGQTDTYQIAGRDVGPMKKIRIGHDNSGLGPAWHLNRVEVTNLKTGEHRIFPA 1425
++ N+FERG++D + + +G ++++RIGHDNSG GP W L++V V ++ G FP
Sbjct: 360 SRKNNFERGKSDEFLLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTVFEFPC 539
Query: 1426 NKWFSKTDDDYQIERDLF----PGD-APDL-NVEYEVVVITSNIPGAGTDANVFVQMFGT 1479
+WF+K +DD QI R+L P D +P + + Y + V T ++ AGTD++V++ + G
Sbjct: 540 CRWFAKDEDDGQISRELVLNVGPMDSSPGVGGIPYLITVCTGDVRSAGTDSHVYIVLHGG 719
Query: 1480 EGKWRRPCEAGPLRLDNPKNNFEAGDTDVFNIKAPD-VGDLKKLRLYHDNKGLGAAWHCE 1538
E + +G + L+ K F+ G TD+FN+ + L + + HDNKG W +
Sbjct: 720 E---KGNETSGKIWLETGK--FQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLD 884
Query: 1539 IVIITNKERRRTWYFYCGQWL 1559
V + F C +W
Sbjct: 885 SVTVYCPMAGIEQVFSCNKWF 947
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 145/310 (46%), Gaps = 7/310 (2%)
Frame = +3
Query: 380 VTIGHDNTGNGPSWHLDHLTVTNL-KTGAIYLFPCRMWFDSRIGDGALERTLEVGD---- 434
+ I HDNTG G W+L+ + VT+L T Y FPC W GDGA+ R L +G
Sbjct: 54 IRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPCGQWLAKSEGDGAISRDL-IGSRDPL 230
Query: 435 SLLKITPYHFYVTTSEIRGAGTDADVFVVLHGEFGDTPSTILPSQLEHFERGQTDHFRLE 494
+ K + Y V T +GAGTDA+V++ + GEFGD+ L S+ +FERG++D F LE
Sbjct: 231 ATRKASKYKVTVFTGNKKGAGTDANVYITMFGEFGDSGEKKLSSRKNNFERGKSDEFLLE 410
Query: 495 LPHVGKLRAMTIGHNNKGEGPDWHLLMVEVREELDGTDGELGPITRFVCNKWIGLGHPDP 554
P +G+L + IGH+N G GP W L V V D ++G + F C +W D
Sbjct: 411 CPKLGRLERVRIGHDNSGFGPGWFLDKVIV------DDVDMGTVFEFPCCRWFA---KDE 563
Query: 555 DSGSEEGVLQRTLKPGGEDPRLEMTDYRLEFHTSSLRGAGTDATVSFNM-TGERGESGPV 613
D G L + P P + Y + T +R AGTD+ V + GE+G
Sbjct: 564 DDGQISRELVLNVGPMDSSPGVGGIPYLITVCTGDVRSAGTDSHVYIVLHGGEKGNETSG 743
Query: 614 RVDAPLEAFERGCIDAFTFXXXXXXX-XXXXXXSHDNTGKNPAWHLLKVVVTSTHPEEPE 672
++ F+RG D F HDN G P W L V V +
Sbjct: 744 KIWLETGKFQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLDSVTVYCPMAGIEQ 923
Query: 673 VTTFICNQWL 682
V F CN+W
Sbjct: 924 V--FSCNKWF 947
Score = 137 bits (345), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 146/328 (44%), Gaps = 18/328 (5%)
Frame = +3
Query: 880 DTFELLLLDVGRPLFLLVRSDGLSRKPTWYMDFAELTNAMIP--PTFFVAGLWVGPETG- 936
DTF + VG + + D WY++ +T+ FF G W+ G
Sbjct: 9 DTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPCGQWLAKSEGD 188
Query: 937 -LEIRIPASYMDPRVDR--AEYLVQVFTSDVKNAGTDAGIWIEVIGDKLTSGRQALLDSS 993
R DP R ++Y V VFT + K AGTDA ++I + G+ SG + L S
Sbjct: 189 GAISRDLIGSRDPLATRKASKYKVTVFTGNKKGAGTDANVYITMFGEFGDSGEKKL-SSR 365
Query: 994 KDTFERAQVDDFKVQCRNLGPLKAVRVWHD--GKGTPWHLDMIVIT-LATGEKYYFPYAN 1050
K+ FER + D+F ++C LG L+ VR+ HD G G W LD +++ + G + FP
Sbjct: 366 KNNFERGKSDEFLLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTVFEFPCCR 545
Query: 1051 WLGQETPTVEIPASL--------QDPTADRRVYKVVVRTSDLPGAGTDANVYLEMRGTRA 1102
W ++ +I L P Y + V T D+ AGTD++VY+ + G
Sbjct: 546 WFAKDEDDGQISRELVLNVGPMDSSPGVGGIPYLITVCTGDVRSAGTDSHVYIVLHGGEK 725
Query: 1103 NLPRHFLRNKAVNLFERGQVDEFEIKAPD-LGALTEITIGHDNAGYGPNWHLEQVEITDT 1161
F+RG D F + L L+ I IGHDN G P W L+ V +
Sbjct: 726 GNETSGKIWLETGKFQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLDSVTVYCP 905
Query: 1162 KINQTWYFECNKWFDAKEGDCKLERVLF 1189
F CNKWF EGD ++R L+
Sbjct: 906 MAGIEQVFSCNKWFATDEGDGLIQRTLY 989
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 124/255 (48%), Gaps = 9/255 (3%)
Frame = +3
Query: 185 EAGIYEIEVKTGRMKGASSDARVYVELYSAHEEDVSTGELRLLDKDVLTKPFGRDALDLF 244
+A Y++ V TG KGA +DA VY+ ++ + +GE +L + F R D F
Sbjct: 240 KASKYKVTVFTGNKKGAGTDANVYITMFGEFGD---SGEKKLSSR---KNNFERGKSDEF 401
Query: 245 IIPCKNVGMPNHIKVWHDNTGKRPDWFLEWIRIRKKGAINWTVFPCQRWFSTQLDDCRIS 304
++ C +G +++ HDN+G P WFL+ + + FPC RWF+ DD +IS
Sbjct: 402 LLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTVFEFPCCRWFAKDEDDGQIS 581
Query: 305 RILF-------AGHATPYIQYKVTTLTSDIRGAGTDANVHFVMHG-TLGDGTRHILSSGQ 356
R L + I Y +T T D+R AGTD++V+ V+HG G+ T +
Sbjct: 582 RELVLNVGPMDSSPGVGGIPYLITVCTGDVRSAGTDSHVYIVLHGGEKGNETSGKIWLET 761
Query: 357 DDFERGMVNXXXXXXXXXXX-XXXVTIGHDNTGNGPSWHLDHLTVTNLKTGAIYLFPCRM 415
F+RGM + + IGHDN G P W LD +TV G +F C
Sbjct: 762 GKFQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLDSVTVYCPMAGIEQVFSCNK 941
Query: 416 WFDSRIGDGALERTL 430
WF + GDG ++RTL
Sbjct: 942 WFATDEGDGLIQRTL 986
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 139/279 (49%), Gaps = 14/279 (5%)
Frame = +3
Query: 647 HDNTGKNPAWHLLKVVVTSTHPEEPEVTTFICNQWLQDPDRAVHPVVELLPGGELPVTLH 706
HDNTG W+L +VVVT H + + F C QWL + + L G P+
Sbjct: 66 HDNTGVGSGWYLERVVVTDLHNTQWKYF-FPCGQWLAKSE-GDGAISRDLIGSRDPLATR 239
Query: 707 ----YKVEVVTSDIKGAGTESKVFLELRGVGGKLGPVHLDN-PSAFERGAADTFILDGPD 761
YKV V T + KGAGT++ V++ + G G G L + + FERG +D F+L+ P
Sbjct: 240 KASKYKVTVFTGNKKGAGTDANVYITMFGEFGDSGEKKLSSRKNNFERGKSDEFLLECPK 419
Query: 762 LGELLVAVVTCDGSGMRPLWHLDSITVWRDPSFTDPETGVYFPCRQWF--DKDAGWV-KE 818
LG L + D SG P W LD + V D T FPC +WF D+D G + +E
Sbjct: 420 LGRLERVRIGHDNSGFGPGWFLDKVIV----DDVDMGTVFEFPCCRWFAKDEDDGQISRE 587
Query: 819 LL----PSRRTLDVVKIPYTLKVYTGDLKNAGTDAGIHINLI-GERGETGYVPLLANYDT 873
L+ P + V IPY + V TGD+++AGTD+ ++I L GE+G +
Sbjct: 588 LVLNVGPMDSSPGVGGIPYLITVCTGDVRSAGTDSHVYIVLHGGEKGNETSGKIWLETGK 767
Query: 874 FERGQVDTFELLLLDVGRPL-FLLVRSDGLSRKPTWYMD 911
F+RG D F + ++ + PL + + D P W++D
Sbjct: 768 FQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLD 884
Score = 117 bits (293), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 152/343 (44%), Gaps = 15/343 (4%)
Frame = +3
Query: 487 QTDHFRLELPHVGKLRAMTIGHNNKGEGPDWHLLMVEVREELDGTDGELGPITRFVCNKW 546
+D FR++ VG ++ + I H+N G G W+L V V +L T + F C +W
Sbjct: 3 SSDTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERV-VVTDLHNTQWKY----FFPCGQW 167
Query: 547 IGLGHPDPDSGSEEGVLQRTLKPGGEDPRL--EMTDYRLEFHTSSLRGAGTDATVSFNMT 604
+ D G + R L G DP + + Y++ T + +GAGTDA V M
Sbjct: 168 LAKSEGD-------GAISRDL-IGSRDPLATRKASKYKVTVFTGNKKGAGTDANVYITMF 323
Query: 605 GERGESGPVRVDAPLEAFERGCIDAFTFXXXXXXXXXXXXXSHDNTGKNPAWHLLKVVVT 664
GE G+SG ++ + FERG D F HDN+G P W L KV+V
Sbjct: 324 GEFGDSGEKKLSSRKNNFERGKSDEFLLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVD 503
Query: 665 STHPEEPEVTTFICNQWL----QDPDRAVHPVVELLPGGELPVT--LHYKVEVVTSDIKG 718
+ V F C +W D + V+ + P P + Y + V T D++
Sbjct: 504 DV--DMGTVFEFPCCRWFAKDEDDGQISRELVLNVGPMDSSPGVGGIPYLITVCTGDVRS 677
Query: 719 AGTESKVFLELRGVGGK----LGPVHLDNPSAFERGAADTFILDGPDLGELLVAV-VTCD 773
AGT+S V++ L G G K G + L+ F+RG D F +D + L + + D
Sbjct: 678 AGTDSHVYIVLHG-GEKGNETSGKIWLET-GKFQRGMTDLFNVDVMSMLSPLSHIDIGHD 851
Query: 774 GSGMRPLWHLDSITVWRDPSFTDPETGV--YFPCRQWFDKDAG 814
G P W LDS+TV+ P G+ F C +WF D G
Sbjct: 852 NKGAAPGWFLDSVTVYC------PMAGIEQVFSCNKWFATDEG 962
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 156/339 (46%), Gaps = 19/339 (5%)
Frame = +3
Query: 751 AADTFILDGPDLGELLVAVVTCDGSGMRPLWHLDSITVWRDPSFTDPETGVYFPCRQWFD 810
++DTF + +G + + D +G+ W+L+ + V + + +FPC QW
Sbjct: 3 SSDTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERVVV---TDLHNTQWKYFFPCGQWLA 173
Query: 811 K---DAGWVKELLPSRRTLDVVKIP-YTLKVYTGDLKNAGTDAGIHINLIGERGETGYVP 866
K D ++L+ SR L K Y + V+TG+ K AGTDA ++I + GE G++G
Sbjct: 174 KSEGDGAISRDLIGSRDPLATRKASKYKVTVFTGNKKGAGTDANVYITMFGEFGDSGEKK 353
Query: 867 LLANYDTFERGQVDTFELLLLDVGRPLFLLVRSDGLSRKPTWYMDFAELTNAMIPPTF-F 925
L + + FERG+ D F L +GR + + D P W++D + + + F F
Sbjct: 354 LSSRKNNFERGKSDEFLLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTVFEF 533
Query: 926 VAGLWVGP-----ETGLEIRIPASYMD--PRVDRAEYLVQVFTSDVKNAGTDAGIWIEVI 978
W + E+ + MD P V YL+ V T DV++AGTD+ ++I +
Sbjct: 534 PCCRWFAKDEDDGQISRELVLNVGPMDSSPGVGGIPYLITVCTGDVRSAGTDSHVYIVLH 713
Query: 979 GDKL---TSGRQALLDSSKDTFERAQVDDFKVQCRN-LGPLKAVRVWHDGKGTP--WHLD 1032
G + TSG+ L++ K F+R D F V + L PL + + HD KG W LD
Sbjct: 714 GGEKGNETSGK-IWLETGK--FQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLD 884
Query: 1033 MIVITL-ATGEKYYFPYANWLGQETPTVEIPASLQDPTA 1070
+ + G + F W + I +L + T
Sbjct: 885 SVTVYCPMAGIEQVFSCNKWFATDEGDGLIQRTLYEQTG 1001
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 151/365 (41%), Gaps = 24/365 (6%)
Frame = +3
Query: 1881 STDTFSLTTPELGRIQTLTIGHNNKGFGAAWCLSRVELENM-NTGERYLWNFDNAWLDTE 1939
S+DTF + +G ++ + I H+N G G+ W L RV + ++ NT +Y + WL
Sbjct: 3 SSDTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPC-GQWLAKS 179
Query: 1940 HGTSRTMAPTTYMQGSGGKDMM----PAAGEGRANYRMELATGLGPDGAMVDGQVMVNII 1995
G G+ +D++ P A + Y++ + TG GA D V + +
Sbjct: 180 EG-----------DGAISRDLIGSRDPLATRKASKYKVTVFTG-NKKGAGTDANVYITMF 323
Query: 1996 GVNAETGRQLLENPVQGFQPGRVEEFGLADLAEVGGMTQLELVH--AGSAP-WAVRFVKV 2052
G ++G + L + F+ G+ +EF L + ++G + ++ + H +G P W + V V
Sbjct: 324 GEFGDSGEKKLSSRKNNFERGKSDEF-LLECPKLGRLERVRIGHDNSGFGPGWFLDKVIV 500
Query: 2053 HNETSGEKAVFVX----XXXXXXXXXXXXXXWIASPCD---------YRVEVQTGDTFGA 2099
+ G F P D Y + V TGD A
Sbjct: 501 DDVDMGTVFEFPCCRWFAKDEDDGQISRELVLNVGPMDSSPGVGGIPYLITVCTGDVRSA 680
Query: 2100 GTNAKIMINVFG-ELG--STGRVQLTYDSSAAEGKRGGICGDVCATQPFKRNQLDVFMLG 2156
GT++ + I + G E G ++G++ L T F+R D+F +
Sbjct: 681 GTDSHVYIVLHGGEKGNETSGKIWL-------------------ETGKFQRGMTDLFNVD 803
Query: 2157 GLQDTGDIKQIEIGHDDAGAGSAWFLSWVRVTNLTTGASAYFLSDSWLAKNKGDGFTKRL 2216
+ + I+IGHD+ GA WFL V V G F + W A ++GDG +R
Sbjct: 804 VMSMLSPLSHIDIGHDNKGAAPGWFLDSVTVYCPMAGIEQVFSCNKWFATDEGDGLIQRT 983
Query: 2217 LTAMT 2221
L T
Sbjct: 984 LYEQT 998
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 88/210 (41%)
Frame = +3
Query: 2087 YRVEVQTGDTFGAGTNAKIMINVFGELGSTGRVQLTYDSSAAEGKRGGICGDVCATQPFK 2146
Y+V V TG+ GAGT+A + I +FGE G +G +L+ F+
Sbjct: 252 YKVTVFTGNKKGAGTDANVYITMFGEFGDSGEKKLS-----------------SRKNNFE 380
Query: 2147 RNQLDVFMLGGLQDTGDIKQIEIGHDDAGAGSAWFLSWVRVTNLTTGASAYFLSDSWLAK 2206
R + D F+L G ++++ IGHD++G G WFL V V ++ G F W AK
Sbjct: 381 RGKSDEFLLE-CPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTVFEFPCCRWFAK 557
Query: 2207 NKGDGFTKRLLTAMTSTGPQMANTGMLADGTATAHVSVSPRDPRDTAFASSALARKLAGG 2266
++ DG R L ++V P D + G
Sbjct: 558 DEDDGQISRELV-----------------------LNVGPMDS--------------SPG 626
Query: 2267 VGAPGYRVTLHTSNVCMAGTGAGVFFELIG 2296
VG Y +T+ T +V AGT + V+ L G
Sbjct: 627 VGGIPYLITVCTGDVRSAGTDSHVYIVLHG 716
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Frame = +3
Query: 189 YEIEVKTGRMKGASSDARVYVELYSAHEEDVSTGELRLLDKDVLTKPFGRDALDLFIIPC 248
Y I V TG ++ A +D+ VY+ L+ + + ++G++ L T F R DLF +
Sbjct: 642 YLITVCTGDVRSAGTDSHVYIVLHGGEKGNETSGKIWLE-----TGKFQRGMTDLFNVDV 806
Query: 249 KNVGMP-NHIKVWHDNTGKRPDWFLEWIRIRKKGAINWTVFPCQRWFSTQLDDCRISRIL 307
++ P +HI + HDN G P WFL+ + + A VF C +WF+T D I R L
Sbjct: 807 MSMLSPLSHIDIGHDNKGAAPGWFLDSVTVYCPMAGIEQVFSCNKWFATDEGDGLIQRTL 986
Query: 308 F 308
+
Sbjct: 987 Y 989
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 59/142 (41%), Gaps = 1/142 (0%)
Frame = +3
Query: 2161 TGDIKQIEIGHDDAGAGSAWFLSWVRVTNLTTGASAYFL-SDSWLAKNKGDGFTKRLLTA 2219
G +K+I I HD+ G GS W+L V VT+L YF WLAK++GDG R L
Sbjct: 36 VGPMKKIRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPCGQWLAKSEGDGAISRDL-- 209
Query: 2220 MTSTGPQMANTGMLADGTATAHVSVSPRDPRDTAFASSALARKLAGGVGAPGYRVTLHTS 2279
+ RDP T AS Y+VT+ T
Sbjct: 210 ------------------------IGSRDPLATRKASK--------------YKVTVFTG 275
Query: 2280 NVCMAGTGAGVFFELIGEYGSS 2301
N AGT A V+ + GE+G S
Sbjct: 276 NKKGAGTDANVYITMFGEFGDS 341
>01895
Length = 998
Score = 226 bits (577), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 187/333 (56%), Gaps = 11/333 (3%)
Frame = +3
Query: 1506 TDVFNIKAPDVGDLKKLRLYHDNKGLGAAWHCEIVIITNKERRRTWYFY-CGQWLDKRTG 1564
+D F +KA VG +KK+R+ HDN G+G+ W+ E V++T+ + YF+ CGQWL K G
Sbjct: 6 SDTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPCGQWLAKSEG 185
Query: 1565 ---VEKILFASDTDPRA--HLVTYSVTVHTSDIKGAGTDANVCLEMFGAKGSSGVRELTG 1619
+ + L S DP A Y VTV T + KGAGTDANV + MFG G SG ++L+
Sbjct: 186 DGAISRDLIGS-RDPLATRKASKYKVTVFTGNKKGAGTDANVYITMFGEFGDSGEKKLSS 362
Query: 1620 KGNLFEQGKSDKFIFKMADLGDLSELEIWHDGKGFGAGWHLDFVEVHSSATGKVYYFPCG 1679
+ N FE+GKSD+F+ + LG L + I HD GFG GW LD V V G V+ FPC
Sbjct: 363 RKNNFERGKSDEFLLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTVFEFPCC 542
Query: 1680 RWLAEDEDDGAIRRR--LQVSHKDPRTFKAQYRVSVTTSDIRGAGTDANVFIQLYG--DA 1735
RW A+DEDDG I R L V D Y ++V T D+R AGTD++V+I L+G
Sbjct: 543 RWFAKDEDDGQISRELVLNVGPMDSSP-GIPYLITVCTGDVRSAGTDSHVYIVLHGGEKG 719
Query: 1736 GETARIKLDNPGKNDFERGCTDVFLFEDRN-VGGIKKIRIGHDGAGLGSGWHLQRVVVEN 1794
ET+ GK F+RG TD+F + + + + I IGHD G GW L V V
Sbjct: 720 NETSGKIWLETGK--FQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLDSVTVYC 893
Query: 1795 LTTGQVVVFDVNRWFDKGEDDGAIERELFPTSG 1827
G VF N+WF E DG I+R L+ +G
Sbjct: 894 PMAGIEQVFSCNKWFATDEGDGLIQRTLYEQTG 992
Score = 206 bits (524), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 123/332 (37%), Positives = 183/332 (55%), Gaps = 11/332 (3%)
Frame = +3
Query: 1375 QTDTYQIAGRDVGPMKKIRIGHDNSGLGPAWHLNRVEVTNLKTGEHR-IFPANKWFSKTD 1433
+DT+++ VGPMKKIRI HDN+G+G W+L RV VT+L + + FP +W +K++
Sbjct: 3 SSDTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPCGQWLAKSE 182
Query: 1434 DDYQIERDLFPGDAPDLN---VEYEVVVITSNIPGAGTDANVFVQMFGTEGKWRRPCEAG 1490
D I RDL P +Y+V V T N GAGTDANV++ MFG G ++G
Sbjct: 183 GDGAISRDLIGSRDPLATRKASKYKVTVFTGNKKGAGTDANVYITMFGEFG------DSG 344
Query: 1491 PLRLDNPKNNFEAGDTDVFNIKAPDVGDLKKLRLYHDNKGLGAAWHCEIVIITNKERRRT 1550
+L + KNNFE G +D F ++ P +G L+++R+ HDN G G W + VI+ + +
Sbjct: 345 EKKLSSRKNNFERGKSDEFLLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTV 524
Query: 1551 WYFYCGQWL-----DKRTGVEKILFASDTDPRAHLVTYSVTVHTSDIKGAGTDANVCLEM 1605
+ F C +W D + E +L D + Y +TV T D++ AGTD++V + +
Sbjct: 525 FEFPCCRWFAKDEDDGQISRELVLNVGPMDSSPG-IPYLITVCTGDVRSAGTDSHVYIVL 701
Query: 1606 FGA-KGSSGVRELTGKGNLFEQGKSDKF-IFKMADLGDLSELEIWHDGKGFGAGWHLDFV 1663
G KG+ ++ + F++G +D F + M+ L LS ++I HD KG GW LD V
Sbjct: 702 HGGEKGNETSGKIWLETGKFQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLDSV 881
Query: 1664 EVHSSATGKVYYFPCGRWLAEDEDDGAIRRRL 1695
V+ G F C +W A DE DG I+R L
Sbjct: 882 TVYCPMAGIEQVFSCNKWFATDEGDGLIQRTL 977
Score = 200 bits (509), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 128/336 (38%), Positives = 189/336 (56%), Gaps = 11/336 (3%)
Frame = +3
Query: 1629 SDKFIFKMADLGDLSELEIWHDGKGFGAGWHLDFVEVHS-SATGKVYYFPCGRWLAEDED 1687
SD F K +G + ++ I HD G G+GW+L+ V V T Y+FPCG+WLA+ E
Sbjct: 6 SDTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPCGQWLAKSEG 185
Query: 1688 DGAIRRRLQVSHKDPRTFK--AQYRVSVTTSDIRGAGTDANVFIQLYGDAGETARIKLDN 1745
DGAI R L + +DP + ++Y+V+V T + +GAGTDANV+I ++G+ G++ KL +
Sbjct: 186 DGAISRDL-IGSRDPLATRKASKYKVTVFTGNKKGAGTDANVYITMFGEFGDSGEKKLSS 362
Query: 1746 PGKNDFERGCTDVFLFEDRNVGGIKKIRIGHDGAGLGSGWHLQRVVVENLTTGQVVVFDV 1805
KN+FERG +D FL E +G ++++RIGHD +G G GW L +V+V+++ G V F
Sbjct: 363 R-KNNFERGKSDEFLLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTVFEFPC 539
Query: 1806 NRWFDKGEDDGAIERELFPTSGGGDGS-STNWRLVVVTANVSGAGTDADVYVQLNGDKA- 1863
RWF K EDDG I REL G D S + + V T +V AGTD+ VY+ L+G +
Sbjct: 540 CRWFAKDEDDGQISRELVLNVGPMDSSPGIPYLITVCTGDVRSAGTDSHVYIVLHGGEKG 719
Query: 1864 --SFGPYTLPASKEAFETGSTDTFSL-TTPELGRIQTLTIGHNNKGFGAAWCLSRVELEN 1920
+ G L K F+ G TD F++ L + + IGH+NKG W L V +
Sbjct: 720 NETSGKIWLETGK--FQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLDSVTVYC 893
Query: 1921 MNTGERYLWNFDNAWLDTEHG---TSRTMAPTTYMQ 1953
G +++ N W T+ G RT+ T ++
Sbjct: 894 PMAGIEQVFSC-NKWFATDEGDGLIQRTLYEQTGLR 998
Score = 200 bits (508), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 120/328 (36%), Positives = 177/328 (53%), Gaps = 7/328 (2%)
Frame = +3
Query: 1123 DEFEIKAPDLGALTEITIGHDNAGYGPNWHLEQVEITDTKINQ-TWYFECNKWFDAKEGD 1181
D F +KA +G + +I I HDN G G W+LE+V +TD Q ++F C +W EGD
Sbjct: 9 DTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPCGQWLAKSEGD 188
Query: 1182 CKLERVLFPSLQNPRSQR--TLYKVRVKTSDRSGAGTDANVYVDIRGDSASTGKTFLKNR 1239
+ R L S ++P + R + YKV V T ++ GAGTDANVY+ + G+ +G+ L +R
Sbjct: 189 GAISRDLIGS-RDPLATRKASKYKVTVFTGNKKGAGTDANVYITMFGEFGDSGEKKLSSR 365
Query: 1240 NLNNFERGNSDDFEITCRPLGRLTELLVGHDNSGMGASWHLEHVEVYDSTTGVTWYFECN 1299
NNFERG SD+F + C LGRL + +GHDNSG G W L+ V V D G + F C
Sbjct: 366 K-NNFERGKSDEFLLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTVFEFPCC 542
Query: 1300 AWLSATEEDCRLERVLPASLDD-PAXXXXXXXXXXXXSDKMGAGTDANVFIDIFGMDGTH 1358
W + E+D ++ R L ++ + D AGTD++V+I + G + +
Sbjct: 543 RWFAKDEDDGQISRELVLNVGPMDSSPGIPYLITVCTGDVRSAGTDSHVYIVLHGGEKGN 722
Query: 1359 --TGRMLLNNKGNDFERGQTDTYQI-AGRDVGPMKKIRIGHDNSGLGPAWHLNRVEVTNL 1415
+G++ L F+RG TD + + + P+ I IGHDN G P W L+ V V
Sbjct: 723 ETSGKIWLET--GKFQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLDSVTVYCP 896
Query: 1416 KTGEHRIFPANKWFSKTDDDYQIERDLF 1443
G ++F NKWF+ + D I+R L+
Sbjct: 897 MAGIEQVFSCNKWFATDEGDGLIQRTLY 980
Score = 195 bits (496), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 176/327 (53%), Gaps = 14/327 (4%)
Frame = +3
Query: 1003 DDFKVQCRNLGPLKAVRVWHD--GKGTPWHLDMIVIT--LATGEKYYFPYANWLGQETPT 1058
D F+V+ +GP+K +R+ HD G G+ W+L+ +V+T T KY+FP WL +
Sbjct: 9 DTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPCGQWLAKSEGD 188
Query: 1059 VEIPASL---QDPTADRRV--YKVVVRTSDLPGAGTDANVYLEMRGTRANLPRHFLRNKA 1113
I L +DP A R+ YKV V T + GAGTDANVY+ M G + L ++
Sbjct: 189 GAISRDLIGSRDPLATRKASKYKVTVFTGNKKGAGTDANVYITMFGEFGDSGEKKLSSRK 368
Query: 1114 VNLFERGQVDEFEIKAPDLGALTEITIGHDNAGYGPNWHLEQVEITDTKINQTWYFECNK 1173
N FERG+ DEF ++ P LG L + IGHDN+G+GP W L++V + D + + F C +
Sbjct: 369 NN-FERGKSDEFLLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTVFEFPCCR 545
Query: 1174 WFDAKEGDCKLERVLFPSLQNPRSQRTL-YKVRVKTSDRSGAGTDANVYVDIRG---DSA 1229
WF E D ++ R L ++ S + Y + V T D AGTD++VY+ + G +
Sbjct: 546 WFAKDEDDGQISRELVLNVGPMDSSPGIPYLITVCTGDVRSAGTDSHVYIVLHGGEKGNE 725
Query: 1230 STGKTFLKNRNLNNFERGNSDDFEITCRP-LGRLTELLVGHDNSGMGASWHLEHVEVYDS 1288
++GK +L+ F+RG +D F + L L+ + +GHDN G W L+ V VY
Sbjct: 726 TSGKIWLET---GKFQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLDSVTVYCP 896
Query: 1289 TTGVTWYFECNAWLSATEEDCRLERVL 1315
G+ F CN W + E D ++R L
Sbjct: 897 MAGIEQVFSCNKWFATDEGDGLIQRTL 977
Score = 183 bits (465), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 124/338 (36%), Positives = 166/338 (49%), Gaps = 12/338 (3%)
Frame = +3
Query: 242 DLFIIPCKNVGMPNHIKVWHDNTGKRPDWFLEWIRIRKKGAINWT-VFPCQRWFSTQLDD 300
D F + VG I++ HDNTG W+LE + + W FPC +W + D
Sbjct: 9 DTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPCGQWLAKSEGD 188
Query: 301 CRISRILFAGHATPYI-----QYKVTTLTSDIRGAGTDANVHFVMHGTLGDGTRHILSSG 355
ISR L G P +YKVT T + +GAGTDANV+ M G GD LSS
Sbjct: 189 GAISRDLI-GSRDPLATRKASKYKVTVFTGNKKGAGTDANVYITMFGEFGDSGEKKLSSR 365
Query: 356 QDDFERGMVNXXXXXXXXXXXXXXVTIGHDNTGNGPSWHLDHLTVTNLKTGAIYLFPCRM 415
+++FERG + V IGHDN+G GP W LD + V ++ G ++ FPC
Sbjct: 366 KNNFERGKSDEFLLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTVFEFPCCR 545
Query: 416 WFDSRIGDGALER--TLEVG--DSLLKITPYHFYVTTSEIRGAGTDADVFVVLH-GEFGD 470
WF DG + R L VG DS I PY V T ++R AGTD+ V++VLH GE G+
Sbjct: 546 WFAKDEDDGQISRELVLNVGPMDSSPGI-PYLITVCTGDVRSAGTDSHVYIVLHGGEKGN 722
Query: 471 TPSTILPSQLEHFERGQTDHFRLE-LPHVGKLRAMTIGHNNKGEGPDWHLLMVEVREELD 529
S + + F+RG TD F ++ + + L + IGH+NKG P W L V V +
Sbjct: 723 ETSGKIWLETGKFQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLDSVTVYCPMA 902
Query: 530 GTDGELGPITRFVCNKWIGLGHPDPDSGSEEGVLQRTL 567
G + F CNKW D G++QRTL
Sbjct: 903 GIE------QVFSCNKWFATDEGD-------GLIQRTL 977
Score = 175 bits (444), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 170/318 (53%), Gaps = 6/318 (1%)
Frame = +3
Query: 1248 NSDDFEITCRPLGRLTELLVGHDNSGMGASWHLEHVEVYD-STTGVTWYFECNAWLSATE 1306
+SD F + +G + ++ + HDN+G+G+ W+LE V V D T ++F C WL+ +E
Sbjct: 3 SSDTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPCGQWLAKSE 182
Query: 1307 EDCRLERVLPASLDDPAXXXXXXXXXXXXS-DKMGAGTDANVFIDIFGMDGTHTGRMLLN 1365
D + R L S D A + +K GAGTDANV+I +FG G +G L+
Sbjct: 183 GDGAISRDLIGSRDPLATRKASKYKVTVFTGNKKGAGTDANVYITMFGEFG-DSGEKKLS 359
Query: 1366 NKGNDFERGQTDTYQIAGRDVGPMKKIRIGHDNSGLGPAWHLNRVEVTNLKTGEHRIFPA 1425
++ N+FERG++D + + +G ++++RIGHDNSG GP W L++V V ++ G FP
Sbjct: 360 SRKNNFERGKSDEFLLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTVFEFPC 539
Query: 1426 NKWFSKTDDDYQIERDLFPGDAP---DLNVEYEVVVITSNIPGAGTDANVFVQMFGTEGK 1482
+WF+K +DD QI R+L P + Y + V T ++ AGTD++V++ + G E
Sbjct: 540 CRWFAKDEDDGQISRELVLNVGPMDSSPGIPYLITVCTGDVRSAGTDSHVYIVLHGGE-- 713
Query: 1483 WRRPCEAGPLRLDNPKNNFEAGDTDVFNIKAPD-VGDLKKLRLYHDNKGLGAAWHCEIVI 1541
+ +G + L+ K F+ G TD+FN+ + L + + HDNKG W + V
Sbjct: 714 -KGNETSGKIWLETGK--FQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLDSVT 884
Query: 1542 ITNKERRRTWYFYCGQWL 1559
+ F C +W
Sbjct: 885 VYCPMAGIEQVFSCNKWF 938
Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 145/310 (46%), Gaps = 7/310 (2%)
Frame = +3
Query: 380 VTIGHDNTGNGPSWHLDHLTVTNL-KTGAIYLFPCRMWFDSRIGDGALERTLEVGD---- 434
+ I HDNTG G W+L+ + VT+L T Y FPC W GDGA+ R L +G
Sbjct: 54 IRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPCGQWLAKSEGDGAISRDL-IGSRDPL 230
Query: 435 SLLKITPYHFYVTTSEIRGAGTDADVFVVLHGEFGDTPSTILPSQLEHFERGQTDHFRLE 494
+ K + Y V T +GAGTDA+V++ + GEFGD+ L S+ +FERG++D F LE
Sbjct: 231 ATRKASKYKVTVFTGNKKGAGTDANVYITMFGEFGDSGEKKLSSRKNNFERGKSDEFLLE 410
Query: 495 LPHVGKLRAMTIGHNNKGEGPDWHLLMVEVREELDGTDGELGPITRFVCNKWIGLGHPDP 554
P +G+L + IGH+N G GP W L V V D ++G + F C +W D
Sbjct: 411 CPKLGRLERVRIGHDNSGFGPGWFLDKVIV------DDVDMGTVFEFPCCRWFA---KDE 563
Query: 555 DSGSEEGVLQRTLKPGGEDPRLEMTDYRLEFHTSSLRGAGTDATVSFNM-TGERGESGPV 613
D G L + P P + Y + T +R AGTD+ V + GE+G
Sbjct: 564 DDGQISRELVLNVGPMDSSPGIP---YLITVCTGDVRSAGTDSHVYIVLHGGEKGNETSG 734
Query: 614 RVDAPLEAFERGCIDAFTFXXXXXXX-XXXXXXSHDNTGKNPAWHLLKVVVTSTHPEEPE 672
++ F+RG D F HDN G P W L V V +
Sbjct: 735 KIWLETGKFQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLDSVTVYCPMAGIEQ 914
Query: 673 VTTFICNQWL 682
V F CN+W
Sbjct: 915 V--FSCNKWF 938
Score = 137 bits (346), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 126/252 (50%), Gaps = 6/252 (2%)
Frame = +3
Query: 185 EAGIYEIEVKTGRMKGASSDARVYVELYSAHEEDVSTGELRLLDKDVLTKPFGRDALDLF 244
+A Y++ V TG KGA +DA VY+ ++ + +GE +L + F R D F
Sbjct: 240 KASKYKVTVFTGNKKGAGTDANVYITMFGEFGD---SGEKKLSSR---KNNFERGKSDEF 401
Query: 245 IIPCKNVGMPNHIKVWHDNTGKRPDWFLEWIRIRKKGAINWTVFPCQRWFSTQLDDCRIS 304
++ C +G +++ HDN+G P WFL+ + + FPC RWF+ DD +IS
Sbjct: 402 LLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTVFEFPCCRWFAKDEDDGQIS 581
Query: 305 RILFAG----HATPYIQYKVTTLTSDIRGAGTDANVHFVMHG-TLGDGTRHILSSGQDDF 359
R L ++P I Y +T T D+R AGTD++V+ V+HG G+ T + F
Sbjct: 582 RELVLNVGPMDSSPGIPYLITVCTGDVRSAGTDSHVYIVLHGGEKGNETSGKIWLETGKF 761
Query: 360 ERGMVNXXXXXXXXXXX-XXXVTIGHDNTGNGPSWHLDHLTVTNLKTGAIYLFPCRMWFD 418
+RGM + + IGHDN G P W LD +TV G +F C WF
Sbjct: 762 QRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLDSVTVYCPMAGIEQVFSCNKWFA 941
Query: 419 SRIGDGALERTL 430
+ GDG ++RTL
Sbjct: 942 TDEGDGLIQRTL 977
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 147/325 (45%), Gaps = 15/325 (4%)
Frame = +3
Query: 880 DTFELLLLDVGRPLFLLVRSDGLSRKPTWYMDFAELTNAMIP--PTFFVAGLWVGPETG- 936
DTF + VG + + D WY++ +T+ FF G W+ G
Sbjct: 9 DTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPCGQWLAKSEGD 188
Query: 937 -LEIRIPASYMDPRVDR--AEYLVQVFTSDVKNAGTDAGIWIEVIGDKLTSGRQALLDSS 993
R DP R ++Y V VFT + K AGTDA ++I + G+ SG + L S
Sbjct: 189 GAISRDLIGSRDPLATRKASKYKVTVFTGNKKGAGTDANVYITMFGEFGDSGEKKL-SSR 365
Query: 994 KDTFERAQVDDFKVQCRNLGPLKAVRVWHD--GKGTPWHLDMIVIT-LATGEKYYFPYAN 1050
K+ FER + D+F ++C LG L+ VR+ HD G G W LD +++ + G + FP
Sbjct: 366 KNNFERGKSDEFLLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTVFEFPCCR 545
Query: 1051 WLGQETPTVEIPASL-----QDPTADRRVYKVVVRTSDLPGAGTDANVYLEMRGTRANLP 1105
W ++ +I L ++ Y + V T D+ AGTD++VY+ + G
Sbjct: 546 WFAKDEDDGQISRELVLNVGPMDSSPGIPYLITVCTGDVRSAGTDSHVYIVLHGGEKGNE 725
Query: 1106 RHFLRNKAVNLFERGQVDEFEIKAPD-LGALTEITIGHDNAGYGPNWHLEQVEITDTKIN 1164
F+RG D F + L L+ I IGHDN G P W L+ V +
Sbjct: 726 TSGKIWLETGKFQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLDSVTVYCPMAG 905
Query: 1165 QTWYFECNKWFDAKEGDCKLERVLF 1189
F CNKWF EGD ++R L+
Sbjct: 906 IEQVFSCNKWFATDEGDGLIQRTLY 980
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 139/276 (50%), Gaps = 11/276 (3%)
Frame = +3
Query: 647 HDNTGKNPAWHLLKVVVTSTHPEEPEVTTFICNQWLQDPDRAVHPVVELLPGGELPVTLH 706
HDNTG W+L +VVVT H + + F C QWL + + L G P+
Sbjct: 66 HDNTGVGSGWYLERVVVTDLHNTQWKYF-FPCGQWLAKSE-GDGAISRDLIGSRDPLATR 239
Query: 707 ----YKVEVVTSDIKGAGTESKVFLELRGVGGKLGPVHLDN-PSAFERGAADTFILDGPD 761
YKV V T + KGAGT++ V++ + G G G L + + FERG +D F+L+ P
Sbjct: 240 KASKYKVTVFTGNKKGAGTDANVYITMFGEFGDSGEKKLSSRKNNFERGKSDEFLLECPK 419
Query: 762 LGELLVAVVTCDGSGMRPLWHLDSITVWRDPSFTDPETGVYFPCRQWF--DKDAGWV-KE 818
LG L + D SG P W LD + V D T FPC +WF D+D G + +E
Sbjct: 420 LGRLERVRIGHDNSGFGPGWFLDKVIV----DDVDMGTVFEFPCCRWFAKDEDDGQISRE 587
Query: 819 LLPSRRTLDVVK-IPYTLKVYTGDLKNAGTDAGIHINLI-GERGETGYVPLLANYDTFER 876
L+ + +D IPY + V TGD+++AGTD+ ++I L GE+G + F+R
Sbjct: 588 LVLNVGPMDSSPGIPYLITVCTGDVRSAGTDSHVYIVLHGGEKGNETSGKIWLETGKFQR 767
Query: 877 GQVDTFELLLLDVGRPL-FLLVRSDGLSRKPTWYMD 911
G D F + ++ + PL + + D P W++D
Sbjct: 768 GMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLD 875
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 152/341 (44%), Gaps = 13/341 (3%)
Frame = +3
Query: 487 QTDHFRLELPHVGKLRAMTIGHNNKGEGPDWHLLMVEVREELDGTDGELGPITRFVCNKW 546
+D FR++ VG ++ + I H+N G G W+L V V +L T + F C +W
Sbjct: 3 SSDTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERV-VVTDLHNTQWKY----FFPCGQW 167
Query: 547 IGLGHPDPDSGSEEGVLQRTLKPGGEDPRL--EMTDYRLEFHTSSLRGAGTDATVSFNMT 604
+ D G + R L G DP + + Y++ T + +GAGTDA V M
Sbjct: 168 LAKSEGD-------GAISRDL-IGSRDPLATRKASKYKVTVFTGNKKGAGTDANVYITMF 323
Query: 605 GERGESGPVRVDAPLEAFERGCIDAFTFXXXXXXXXXXXXXSHDNTGKNPAWHLLKVVVT 664
GE G+SG ++ + FERG D F HDN+G P W L KV+V
Sbjct: 324 GEFGDSGEKKLSSRKNNFERGKSDEFLLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVD 503
Query: 665 STHPEEPEVTTFICNQWL----QDPDRAVHPVVELLPGGELPVTLHYKVEVVTSDIKGAG 720
+ V F C +W D + V+ + P P + Y + V T D++ AG
Sbjct: 504 DV--DMGTVFEFPCCRWFAKDEDDGQISRELVLNVGPMDSSP-GIPYLITVCTGDVRSAG 674
Query: 721 TESKVFLELRGVGGK----LGPVHLDNPSAFERGAADTFILDGPDLGELLVAV-VTCDGS 775
T+S V++ L G G K G + L+ F+RG D F +D + L + + D
Sbjct: 675 TDSHVYIVLHG-GEKGNETSGKIWLET-GKFQRGMTDLFNVDVMSMLSPLSHIDIGHDNK 848
Query: 776 GMRPLWHLDSITVWRDPSFTDPETGV--YFPCRQWFDKDAG 814
G P W LDS+TV+ P G+ F C +WF D G
Sbjct: 849 GAAPGWFLDSVTVYC------PMAGIEQVFSCNKWFATDEG 953
Score = 110 bits (275), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 155/339 (45%), Gaps = 17/339 (5%)
Frame = +3
Query: 751 AADTFILDGPDLGELLVAVVTCDGSGMRPLWHLDSITVWRDPSFTDPETGVYFPCRQWFD 810
++DTF + +G + + D +G+ W+L+ + V + + +FPC QW
Sbjct: 3 SSDTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERVVV---TDLHNTQWKYFFPCGQWLA 173
Query: 811 K---DAGWVKELLPSRRTLDVVKIP-YTLKVYTGDLKNAGTDAGIHINLIGERGETGYVP 866
K D ++L+ SR L K Y + V+TG+ K AGTDA ++I + GE G++G
Sbjct: 174 KSEGDGAISRDLIGSRDPLATRKASKYKVTVFTGNKKGAGTDANVYITMFGEFGDSGEKK 353
Query: 867 LLANYDTFERGQVDTFELLLLDVGRPLFLLVRSDGLSRKPTWYMDFAELTNAMIPPTF-F 925
L + + FERG+ D F L +GR + + D P W++D + + + F F
Sbjct: 354 LSSRKNNFERGKSDEFLLECPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTVFEF 533
Query: 926 VAGLWVGP-----ETGLEIRIPASYMDPRVDRAEYLVQVFTSDVKNAGTDAGIWIEVIGD 980
W + E+ + MD YL+ V T DV++AGTD+ ++I + G
Sbjct: 534 PCCRWFAKDEDDGQISRELVLNVGPMDSSPG-IPYLITVCTGDVRSAGTDSHVYIVLHGG 710
Query: 981 KL---TSGRQALLDSSKDTFERAQVDDFKVQCRN-LGPLKAVRVWHDGKGTP--WHLDMI 1034
+ TSG+ L++ K F+R D F V + L PL + + HD KG W LD +
Sbjct: 711 EKGNETSGK-IWLETGK--FQRGMTDLFNVDVMSMLSPLSHIDIGHDNKGAAPGWFLDSV 881
Query: 1035 VITL-ATGEKYYFPYANWLGQETPTVEIPASLQDPTADR 1072
+ G + F W + I +L + T R
Sbjct: 882 TVYCPMAGIEQVFSCNKWFATDEGDGLIQRTLYEQTGLR 998
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 151/362 (41%), Gaps = 21/362 (5%)
Frame = +3
Query: 1881 STDTFSLTTPELGRIQTLTIGHNNKGFGAAWCLSRVELENM-NTGERYLWNFDNAWLDTE 1939
S+DTF + +G ++ + I H+N G G+ W L RV + ++ NT +Y + WL
Sbjct: 3 SSDTFRVKANCVGPMKKIRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPC-GQWLAKS 179
Query: 1940 HGTSRTMAPTTYMQGSGGKDMM----PAAGEGRANYRMELATGLGPDGAMVDGQVMVNII 1995
G G+ +D++ P A + Y++ + TG GA D V + +
Sbjct: 180 EG-----------DGAISRDLIGSRDPLATRKASKYKVTVFTG-NKKGAGTDANVYITMF 323
Query: 1996 GVNAETGRQLLENPVQGFQPGRVEEFGLADLAEVGGMTQLELVH--AGSAP-WAVRFVKV 2052
G ++G + L + F+ G+ +EF L + ++G + ++ + H +G P W + V V
Sbjct: 324 GEFGDSGEKKLSSRKNNFERGKSDEF-LLECPKLGRLERVRIGHDNSGFGPGWFLDKVIV 500
Query: 2053 HNETSGEKAVFVX----XXXXXXXXXXXXXXWIASPCD------YRVEVQTGDTFGAGTN 2102
+ G F P D Y + V TGD AGT+
Sbjct: 501 DDVDMGTVFEFPCCRWFAKDEDDGQISRELVLNVGPMDSSPGIPYLITVCTGDVRSAGTD 680
Query: 2103 AKIMINVFG-ELG--STGRVQLTYDSSAAEGKRGGICGDVCATQPFKRNQLDVFMLGGLQ 2159
+ + I + G E G ++G++ L T F+R D+F + +
Sbjct: 681 SHVYIVLHGGEKGNETSGKIWL-------------------ETGKFQRGMTDLFNVDVMS 803
Query: 2160 DTGDIKQIEIGHDDAGAGSAWFLSWVRVTNLTTGASAYFLSDSWLAKNKGDGFTKRLLTA 2219
+ I+IGHD+ GA WFL V V G F + W A ++GDG +R L
Sbjct: 804 MLSPLSHIDIGHDNKGAAPGWFLDSVTVYCPMAGIEQVFSCNKWFATDEGDGLIQRTLYE 983
Query: 2220 MT 2221
T
Sbjct: 984 QT 989
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%)
Frame = +3
Query: 2087 YRVEVQTGDTFGAGTNAKIMINVFGELGSTGRVQLTYDSSAAEGKRGGICGDVCATQPFK 2146
Y+V V TG+ GAGT+A + I +FGE G +G +L+ F+
Sbjct: 252 YKVTVFTGNKKGAGTDANVYITMFGEFGDSGEKKLS-----------------SRKNNFE 380
Query: 2147 RNQLDVFMLGGLQDTGDIKQIEIGHDDAGAGSAWFLSWVRVTNLTTGASAYFLSDSWLAK 2206
R + D F+L G ++++ IGHD++G G WFL V V ++ G F W AK
Sbjct: 381 RGKSDEFLLE-CPKLGRLERVRIGHDNSGFGPGWFLDKVIVDDVDMGTVFEFPCCRWFAK 557
Query: 2207 NKGDGFTKRLLTAMTSTGPQMANTGM 2232
++ DG R L + + GP ++ G+
Sbjct: 558 DEDDGQISREL--VLNVGPMDSSPGI 629
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Frame = +3
Query: 189 YEIEVKTGRMKGASSDARVYVELYSAHEEDVSTGELRLLDKDVLTKPFGRDALDLFIIPC 248
Y I V TG ++ A +D+ VY+ L+ + + ++G++ L T F R DLF +
Sbjct: 633 YLITVCTGDVRSAGTDSHVYIVLHGGEKGNETSGKIWLE-----TGKFQRGMTDLFNVDV 797
Query: 249 KNVGMP-NHIKVWHDNTGKRPDWFLEWIRIRKKGAINWTVFPCQRWFSTQLDDCRISRIL 307
++ P +HI + HDN G P WFL+ + + A VF C +WF+T D I R L
Sbjct: 798 MSMLSPLSHIDIGHDNKGAAPGWFLDSVTVYCPMAGIEQVFSCNKWFATDEGDGLIQRTL 977
Query: 308 F 308
+
Sbjct: 978 Y 980
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 59/142 (41%), Gaps = 1/142 (0%)
Frame = +3
Query: 2161 TGDIKQIEIGHDDAGAGSAWFLSWVRVTNLTTGASAYFL-SDSWLAKNKGDGFTKRLLTA 2219
G +K+I I HD+ G GS W+L V VT+L YF WLAK++GDG R L
Sbjct: 36 VGPMKKIRIEHDNTGVGSGWYLERVVVTDLHNTQWKYFFPCGQWLAKSEGDGAISRDL-- 209
Query: 2220 MTSTGPQMANTGMLADGTATAHVSVSPRDPRDTAFASSALARKLAGGVGAPGYRVTLHTS 2279
+ RDP T AS Y+VT+ T
Sbjct: 210 ------------------------IGSRDPLATRKASK--------------YKVTVFTG 275
Query: 2280 NVCMAGTGAGVFFELIGEYGSS 2301
N AGT A V+ + GE+G S
Sbjct: 276 NKKGAGTDANVYITMFGEFGDS 341
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158279616|gb|EDP05376.1| flagellar associated protein
[Chlamydomonas reinhardtii]
(615 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03395 174 1e-43
00561 61 3e-10
30256 57 3e-08
17598 56 3e-08
19949 56 5e-08
12806 55 6e-08
27465 53 3e-07
12574 51 1e-06
21105 51 2e-06
33180 50 2e-06
02147 49 5e-06
01327 49 6e-06
01462 47 3e-05
01249 47 3e-05
02090 45 6e-05
03387 45 9e-05
03156 44 1e-04
17602 44 2e-04
13335 44 2e-04
15780 43 4e-04
02960 42 8e-04
01598 41 0.001
31384 40 0.002
11493 40 0.003
12960 40 0.003
10162 40 0.004
01768 38 0.010
13278 38 0.010
18981 37 0.018
19140 37 0.018
31864 36 0.050
19498 35 0.12
27270 35 0.13
26939 34 0.14
12140 34 0.16
02948 34 0.18
29912 34 0.20
20662 34 0.22
14555 33 0.26
26107 33 0.30
37180 32 0.76
14500 32 0.86
19863 32 0.88
04358 32 0.89
08679 31 1.2
01805 31 1.3
21921 31 1.7
15337 30 2.0
13890 30 2.2
10264 30 2.2
30295 30 2.3
27806 30 2.5
17807 30 3.3
31474 30 3.7
11915 30 3.9
00825 30 4.0
13486 29 4.5
10742 29 4.5
15972 29 4.7
17266 29 5.5
03044 29 6.9
>03395
Length = 2795
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 127/204 (62%), Gaps = 6/204 (2%)
Frame = +2
Query: 409 AVTAIASTADSSRILSGGEEGMVRVWRI------GRTSQTLEASMKDHKGPVNCIRIKGS 462
VTAIA T+ ++++SGG EG VRVW I G+T L A+MK+HKG V I+I +
Sbjct: 2 GVTAIAVTSCGTKLVSGGGEGQVRVWDIVKDMLTGKTRGDLVANMKEHKGKVTAIQIHTN 181
Query: 463 GDECVSASSDGSCILWDLHTFKRRTSLFANTFFKSVVYHPDESQLVTAGTDRKVTYWDAY 522
CVSAS+DGS I+WDL T R + ANT FK V + + ++T+GTD K+ YW+
Sbjct: 182 DRCCVSASTDGSTIIWDLITNTRSQIVLANTLFKCVCFGGKDLHILTSGTDHKIGYWEVG 361
Query: 523 DGNAIRIIDGSDLDEVNALAVDRDGEALVSGGGDKLVKLWGYDEGHCYFVGVAHSGAITA 582
DG +R ++GS +N + +DRDG+ +++GG D L+KLW Y+EG G+ HS IT
Sbjct: 362 DGGLLRELEGSQTGAINTIDIDRDGQTILTGGEDSLLKLWRYNEGEVTHTGIGHSNQITK 541
Query: 583 VGVTPDKQRIVSVGTEGGIFIWDY 606
+ P++ IVS G +G + IW +
Sbjct: 542 ARICPNRHYIVSGGEDGALHIWKF 613
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 2/172 (1%)
Frame = +2
Query: 309 TSRLKEELV--QTAHNDKINGMAFPNEYSEVFATCGTGFIRLWHLTTCRELLRIAVPNLE 366
T + + +LV H K+ + + G +W L T +I + N
Sbjct: 101 TGKTRGDLVANMKEHKGKVTAIQIHTNDRCCVSASTDGSTIIWDLIT-NTRSQIVLANTL 277
Query: 367 CFCIAFTTDGSAILSGWSDGKIRAFGPQSGKIIFTINDAHQKAVTAIASTADSSRILSGG 426
C+ F IL+ +D KI + G ++ + + A+ I D IL+GG
Sbjct: 278 FKCVCFGGKDLHILTSGTDHKIGYWEVGDGGLLRELEGSQTGAINTIDIDRDGQTILTGG 457
Query: 427 EEGMVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGSGDECVSASSDGSCILW 478
E+ ++++WR T + H + RI + VS DG+ +W
Sbjct: 458 EDSLLKLWRYNEGEVT--HTGIGHSNQITKARICPNRHYIVSGGEDGALHIW 607
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +2
Query: 370 IAFTTDGSAILSGWSDGKIRAFGPQSGKIIFTINDAHQKAVTAIASTADSSRILSGGEEG 429
I DG IL+G D ++ + G++ T H +T + I+SGGE+G
Sbjct: 416 IDIDRDGQTILTGGEDSLLKLWRYNEGEVTHT-GIGHSNQITKARICPNRHYIVSGGEDG 592
Query: 430 MVRVWR 435
+ +W+
Sbjct: 593 ALHIWK 610
>00561
Length = 1003
Score = 60.8 bits (146), Expect(2) = 3e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 3/168 (1%)
Frame = -3
Query: 346 IRLWHLTTCRELLRIAVPNLECFCIAFTTDGSAILSGWSDGKIRAFGPQSGKIIFTIN-D 404
+RLW L + R + +AF+ D I+SG D I+ + + FTI D
Sbjct: 794 LRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN-TLAECKFTIQED 618
Query: 405 AHQKAVTAIASTADSSR--ILSGGEEGMVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGS 462
H V+ + + + S I+S G + V+VW + L+ + H G +N + +
Sbjct: 617 GHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCK--LKNNHHGHNGYLNTVTVSPD 444
Query: 463 GDECVSASSDGSCILWDLHTFKRRTSLFANTFFKSVVYHPDESQLVTA 510
G C S D +LWDL+ K +L N ++ + P+ L A
Sbjct: 443 GSLCTSGGKDSKALLWDLNDGKNLYTLEHNDIINALCFSPNRYWLCVA 300
Score = 22.3 bits (46), Expect(2) = 3e-10, Method: Compositional matrix adjust.
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 540 ALAVDRDGEALVSGGGDKLVKLW 562
+LA DG+ L +G D +++W
Sbjct: 192 SLAWSTDGQTLFAGYSDNTIRVW 124
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 6/206 (2%)
Frame = -3
Query: 406 HQKAVTAIASTADSSRILSGGEEGMVRVWRI--GRTSQTLEASMKDHKGPVNCIRIKGSG 463
H ++ + ++D + LSG + +R+W + G+T++ E KD V +
Sbjct: 869 HSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKD----VLSVAFSADN 702
Query: 464 DECVSASSDGSCILWD-LHTFKRRTSLFANTFFKSVV-YHPDESQ--LVTAGTDRKVTYW 519
+ VS S D + LW+ L K +T + S V + P+ S +V+ G DR V W
Sbjct: 701 RQIVSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVW 522
Query: 520 DAYDGNAIRIIDGSDLDEVNALAVDRDGEALVSGGGDKLVKLWGYDEGHCYFVGVAHSGA 579
+ + G + +N + V DG SGG D LW ++G + + H+
Sbjct: 521 NLANCKLKNNHHGHN-GYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYT-LEHNDI 348
Query: 580 ITAVGVTPDKQRIVSVGTEGGIFIWD 605
I A+ +P++ + V I IWD
Sbjct: 347 INALCFSPNRYWLC-VAYGPSIKIWD 273
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Frame = -3
Query: 49 QEFLQGHSDKVSCLALSRSGRYLASGQITYMGFTADIIIWDLESKQLIHRMALHKVKVQA 108
Q+ L GHS +S + LS G Y SG + + +WDL + + R H V +
Sbjct: 887 QKRLYGHSHFISDVVLSSDGNYALSG-----SWDQTLRLWDLAAGKTTRRFEGHTKDVLS 723
Query: 109 LDFSCDERFLASLGGQDDNALVLWD-VASGNAICGSPCNTNFTNCVKFFNNSPDKLITAG 167
+ FS D R + S G D + LW+ +A +T++ +CV+F N + +I +
Sbjct: 722 VAFSADNRQIVS--GSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSC 549
Query: 168 NFNMNVWTYDAGNNKLR 184
++ V ++ N KL+
Sbjct: 548 GWDRTVKVWNLANCKLK 498
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 11/153 (7%)
Frame = -3
Query: 464 DECVSASSDGSCILWDL-------HTFKRRTSLFANTFFKSVVYHPDESQLVTAGTDRKV 516
D +SAS D + I+W L + + ++ + F VV D + ++ D+ +
Sbjct: 971 DTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYALSGSWDQTL 792
Query: 517 TYWDAYDGNAIRIIDGSDLDEVNALAVDRDGEALVSGGGDKLVKLWGYDEGHCYFV--GV 574
WD G R +G D V ++A D +VSG DK +KLW C F
Sbjct: 791 RLWDLAAGKTTRRFEGHTKD-VLSVAFSADNRQIVSGSRDKTIKLWN-TLAECKFTIQED 618
Query: 575 AHSGAITAVGVTPDKQR--IVSVGTEGGIFIWD 605
H+ ++ V +P+ IVS G + + +W+
Sbjct: 617 GHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWN 519
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
Frame = -3
Query: 503 DESQLVTAGTDRKVTYWDA-------YDGNAIRIIDGSDLDEVNALAVDRDGEALVSGGG 555
D +++A D+ + W Y R+ S ++ + + DG +SG
Sbjct: 977 DPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHF--ISDVVLSSDGNYALSGSW 804
Query: 556 DKLVKLWGYDEGHCYFVGVAHSGAITAVGVTPDKQRIVSVGTEGGIFIWD 605
D+ ++LW G H+ + +V + D ++IVS + I +W+
Sbjct: 803 DQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN 654
>30256
Length = 961
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 100/239 (41%), Gaps = 9/239 (3%)
Frame = +3
Query: 376 GSAILSGWSDGKIRAFGPQSGKIIFTINDAHQKAVTAIASTADSSRILSGGEEGMVRVWR 435
G+ ++SG +D ++ + +G T+ H V ++ + +++SG + +RVW
Sbjct: 72 GNTVISGSTDRSLKVWNADTGVCTHTLY-GHSSTVRCLSLSG--KKVVSGSRDATLRVWD 242
Query: 436 IGRTSQTLEASMKDHKGPVNCIRIKGSGDECVSASSDGSCILWD------LHTFKRRTSL 489
I + L + H V C++ G VS + D + +WD LHT + T+
Sbjct: 243 I-ESGHCLNV-LLGHMAAVRCVQYDGK--RVVSGAXDYTVRVWDPDTASCLHTLQGHTNR 410
Query: 490 FANTFFKSVVYHPDESQLVTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVNALAVDRDGEA 549
+ F V +V+ D + WD G + + G + ++
Sbjct: 411 VYSLQFDGV-------YVVSGSLDTSIRVWDVRCGKLVHTLMG---HQSLTSGLELKDNL 560
Query: 550 LVSGGGDKLVKLWGYDEGHCYFVGVA---HSGAITAVGVTPDKQRIVSVGTEGGIFIWD 605
LVSG D VK+W G C + H A+T + +K+ +V+ +G + +WD
Sbjct: 561 LVSGNADSTVKVWDVHTGKCLQTLLGPNKHRSAVTCLQF--NKKFVVTCSDDGTVKLWD 731
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Frame = +3
Query: 346 IRLWHLTTCRELLRIAVPNLECFCIAFTTDGSAILSGWSDGKIRAFGPQSGKIIFTINDA 405
+R+W T L + + + F DG ++SG D IR + + GK++ T+
Sbjct: 348 VRVWDPDTASCLHTLQGHTNRVYSLQF--DGVYVVSGSLDTSIRVWDVRCGKLVHTLM-G 518
Query: 406 HQKAVTAIASTADSSRILSGGEEGMVRVWRI--GRTSQTLEASMKDHKGPVNCIRIKGSG 463
HQ + + + ++SG + V+VW + G+ QTL K H+ V C++ +
Sbjct: 519 HQSLTSGLE--LKDNLLVSGNADSTVKVWDVHTGKCLQTLLGPNK-HRSAVTCLQF--NK 683
Query: 464 DECVSASSDGSCILWDLHT 482
V+ S DG+ LWDL+T
Sbjct: 684 KFVVTCSDDGTVKLWDLNT 740
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 59/134 (44%)
Frame = +3
Query: 7 LNSVIGFGGAIENGLIAHPDGRTIIYPLGSTIVLRDRADPRSQEFLQGHSDKVSCLALSR 66
LN ++G A+ + + R + T+ + D LQGH+++V +L
Sbjct: 261 LNVLLGHMAAVR--CVQYDGKRVVSGAXDYTVRVWDPDTASCLHTLQGHTNRV--YSLQF 428
Query: 67 SGRYLASGQITYMGFTADIIIWDLESKQLIHRMALHKVKVQALDFSCDERFLASLGGQDD 126
G Y+ SG + I +WD+ +L+H + H+ L+ + L S G D
Sbjct: 429 DGVYVVSGSLD-----TSIRVWDVRCGKLVHTLMGHQSLTSGLELK--DNLLVS--GNAD 581
Query: 127 NALVLWDVASGNAI 140
+ + +WDV +G +
Sbjct: 582 STVKVWDVHTGKCL 623
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 64/146 (43%)
Frame = +3
Query: 462 SGDECVSASSDGSCILWDLHTFKRRTSLFANTFFKSVVYHPDESQLVTAGTDRKVTYWDA 521
+G+ +S S+D S +W+ T +L+ ++ + + ++V+ D + WD
Sbjct: 69 TGNTVISGSTDRSLKVWNADTGVCTHTLYGHSSTVRCLSLSGK-KVVSGSRDATLRVWDI 245
Query: 522 YDGNAIRIIDGSDLDEVNALAVDRDGEALVSGGGDKLVKLWGYDEGHCYFVGVAHSGAIT 581
G+ + ++ G V DG+ +VSG D V++W D C H+ +
Sbjct: 246 ESGHCLNVLLG---HMAAVRCVQYDGKRVVSGAXDYTVRVWDPDTASCLHTLQGHTNRVY 416
Query: 582 AVGVTPDKQRIVSVGTEGGIFIWDYQ 607
++ D +VS + I +WD +
Sbjct: 417 SLQF--DGVYVVSGSLDTSIRVWDVR 488
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%)
Frame = +3
Query: 52 LQGHSDKVSCLALSRSGRYLASGQITYMGFTADIIIWDLESKQLIHRMALHKVKVQALDF 111
L GHS V CL+L SG+ + SG A + +WD+ES ++ + H V+ + +
Sbjct: 150 LYGHSSTVRCLSL--SGKKVVSGS-----RDATLRVWDIESGHCLNVLLGHMAAVRCVQY 308
Query: 112 SCDERFLASLGGQDDNALVLWDVASGNAICGSPCNTNFTNCVKFFNNSPDKLITAGNFNM 171
D + + S G D + +WD + + + +TN ++F + +G+ +
Sbjct: 309 --DGKRVVS--GAXDYTVRVWDPDTASCLHTLQGHTNRVYSLQF----DGVYVVSGSLDT 464
Query: 172 NVWTYDAGNNKLRPT 186
++ +D KL T
Sbjct: 465 SIRVWDVRCGKLVHT 509
>17598
Length = 875
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 101/246 (41%), Gaps = 13/246 (5%)
Frame = +1
Query: 321 HNDKINGMAFPNEYSEVFATCGTGFIRLWHLTTCRELLRIAVPNLECFCIAFTTDGSAIL 380
H+ ++ ++ + V ++ +RLW + R + +AF+ D I
Sbjct: 118 HSHFVSDVSLSADSRYVLSSSWDATLRLWDIKKGNTTRRFISHTRDALAVAFSPDNRQIA 297
Query: 381 SGWSDGKIRAFGPQSGKIIFTIN-DAHQKAVTAIA--STADSSRILSGGEEGMVRVWRIG 437
SG D ++ + G+ FT++ ++HQ VT + A S ++S + ++VW
Sbjct: 298 SGGRDKALKIWNT-VGECKFTVDANSHQDWVTCVKFHQDAKSPLVVSASMDKTIKVW--D 468
Query: 438 RTSQTLEASMKDHKGPVNCIRIKGSGDECVSASSDGSCILWDLHTFKRRTSLFANTFFKS 497
+ TL+ + HK +N I + S S DG + W++ + + +
Sbjct: 469 NQTMTLKHTFVGHKTQINAIDLALKTYYLASGSKDGIVMTWNIQNGTFLGKIDCDCEVNA 648
Query: 498 VVYHPDESQLVTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVN----------ALAVDRDG 547
V + P++ L GT + WD + I+ I S +D + +LA D G
Sbjct: 649 VKFSPNKYWLF-VGTSEGIQIWDLPNQKKIKDIRASPIDAQHKSQKKSIACTSLAWDASG 825
Query: 548 EALVSG 553
L +G
Sbjct: 826 HTLFAG 843
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Frame = +1
Query: 52 LQGHSDKVSCLALSRSGRYLASGQITYMGFTADIIIWDLESKQLIHRMALHKVKVQALDF 111
LQGHS VS ++LS RY+ S + A + +WD++ R H A+ F
Sbjct: 109 LQGHSHFVSDVSLSADSRYVLSS-----SWDATLRLWDIKKGNTTRRFISHTRDALAVAF 273
Query: 112 SCDERFLASLGGQDDNALVLWD-VASGNAICGSPCNTNFTNCVKFFNNSPDKLITAGNFN 170
S D R +AS GG+ D AL +W+ V + + ++ CVKF ++ L+ + + +
Sbjct: 274 SPDNRQIAS-GGR-DKALKIWNTVGECKFTVDANSHQDWVTCVKFHQDAKSPLVVSASMD 447
Query: 171 MNVWTYDAGNNKLRPT 186
+ +D L+ T
Sbjct: 448 KTIKVWDNQTMTLKHT 495
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 88/215 (40%), Gaps = 5/215 (2%)
Frame = +1
Query: 406 HQKAVTAIASTADSSRILSGGEEGMVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGSGDE 465
H V+ ++ +ADS +LS + +R+W I + + T H + +
Sbjct: 118 HSHFVSDVSLSADSRYVLSSSWDATLRLWDIKKGNTTRR--FISHTRDALAVAFSPDNRQ 291
Query: 466 CVSASSDGSCILWDLHTFKRRTSLFANT---FFKSVVYHPDESQ--LVTAGTDRKVTYWD 520
S D + +W+ + + ++ AN+ + V +H D +V+A D+ + WD
Sbjct: 292 IASGGRDKALKIWNT-VGECKFTVDANSHQDWVTCVKFHQDAKSPLVVSASMDKTIKVWD 468
Query: 521 AYDGNAIRIIDGSDLDEVNALAVDRDGEALVSGGGDKLVKLWGYDEGHCYFVGVAHSGAI 580
G ++NA+ + L SG D +V W G + + +
Sbjct: 469 NQTMTLKHTFVGHKT-QINAIDLALKTYYLASGSKDGIVMTWNIQNG-TFLGKIDCDCEV 642
Query: 581 TAVGVTPDKQRIVSVGTEGGIFIWDYQRPQTLADI 615
AV +P+K + VGT GI IWD + + DI
Sbjct: 643 NAVKFSPNKYWLF-VGTSEGIQIWDLPNQKKIKDI 744
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 15/151 (9%)
Frame = +1
Query: 472 DGSCILWDLHTFK-----------RRTSLFANTFFKSVVYHPDESQLVTAGTDRKVTYWD 520
D I+WDL K RRT + F V D ++++ D + WD
Sbjct: 28 DKLLIVWDLVPRKDGDEDETWGGPRRTLQGHSHFVSDVSLSADSRYVLSSSWDATLRLWD 207
Query: 521 AYDGNAIRIIDGSDLDEVNALAVDRDGEALVSGGGDKLVKLWGYDEGHCYFV--GVAHSG 578
GN R D + A+A D + SGG DK +K+W G C F +H
Sbjct: 208 IKKGNTTRRFISHTRDAL-AVAFSPDNRQIASGGRDKALKIWNT-VGECKFTVDANSHQD 381
Query: 579 AITAVGVTPDKQR--IVSVGTEGGIFIWDYQ 607
+T V D + +VS + I +WD Q
Sbjct: 382 WVTCVKFHQDAKSPLVVSASMDKTIKVWDNQ 474
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 10/168 (5%)
Frame = +1
Query: 55 HSDKVSCLALSRSGRYLASGQITYMGFTADIIIWDLESKQLIHRMALHKVKVQALDFSCD 114
H D V+C+ + + S + I +WD ++ L H HK ++ A+D +
Sbjct: 373 HQDWVTCVKFHQDAK---SPLVVSASMDKTIKVWDNQTMTLKHTFVGHKTQINAIDLALK 543
Query: 115 ERFLASLGGQDDNALVLWDVASGNAICGSPCNTNFTNCVKFFNNSPDK--LITAGNFNMN 172
+LAS G D ++ W++ +G + C+ N VKF SP+K L + +
Sbjct: 544 TYYLAS--GSKDGIVMTWNIQNGTFLGKIDCDCE-VNAVKF---SPNKYWLFVGTSEGIQ 705
Query: 173 VWTYDAGNNK------LRPTDATLGTLKRVF--KSVVVDANDEYAYCG 212
+W D N K P DA + K+ S+ DA+ + G
Sbjct: 706 IW--DLPNQKKIKDIRASPIDAQHKSQKKSIACTSLAWDASGHTLFAG 843
>19949
Length = 903
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 1/148 (0%)
Frame = +2
Query: 424 SGGEEGMVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGSGDECVSASSDGSCILWDLHTF 483
SG + V++W I R + K H G V C+R G SAS DG LWDL
Sbjct: 44 SGSMDCNVKLWDIRRKGCIY--TYKGHTGCVCCLRFSPDGRWIASASEDGLVKLWDLTAG 217
Query: 484 KRRTSL-FANTFFKSVVYHPDESQLVTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVNALA 542
K T L ++ +HP E L + DR V +WD I + + + + ++
Sbjct: 218 KLLTDLKLHRDAVNTIEFHPHEFLLASGSADRTVKFWDLETFQLISTTE-PEANSIRSIL 394
Query: 543 VDRDGEALVSGGGDKLVKLWGYDEGHCY 570
DG L SG D L K++ ++ Y
Sbjct: 395 FHPDGVCLYSGSKDTL-KVYHWEPLELY 475
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 3/157 (1%)
Frame = +2
Query: 370 IAFTTDGSAILSGWSDGKIRAFGPQSGKIIFTINDAHQKAVTAIASTADSSRILSGGEEG 429
+ F G+ SG D ++ + + I+T H V + + D I S E+G
Sbjct: 11 LDFHPYGAYTASGSMDCNVKLWDIRRKGCIYTYK-GHTGCVCCLRFSPDGRWIASASEDG 187
Query: 430 MVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGSGDECVSASSDGSCILWDLHTFK--RRT 487
+V++W + T+ L +K H+ VN I S S+D + WDL TF+ T
Sbjct: 188 LVKLWDL--TAGKLLTDLKLHRDAVNTIEFHPHEFLLASGSADRTVKFWDLETFQLISTT 361
Query: 488 SLFANTFFKSVVYHPDESQLVTAGTDR-KVTYWDAYD 523
AN+ +S+++HPD L + D KV +W+ +
Sbjct: 362 EPEANS-IRSILFHPDGVCLYSGSKDTLKVYHWEPLE 469
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%)
Frame = +2
Query: 53 QGHSDKVSCLALSRSGRYLASGQITYMGFTADIIIWDLESKQLIHRMALHKVKVQALDFS 112
+GH+ V CL S GR++AS + + +WDL + +L+ + LH+ V ++F
Sbjct: 110 KGHTGCVCCLRFSPDGRWIASASEDGL-----VKLWDLTAGKLLTDLKLHRDAVNTIEFH 274
Query: 113 CDERFLASLGGQDDNALVLWDVASGNAICGSPCNTNFTNCVKF 155
E LAS G D + WD+ + I + N + F
Sbjct: 275 PHEFLLAS--GSADRTVKFWDLETFQLISTTEPEANSIRSILF 397
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = +2
Query: 538 VNALAVDRDGEALVSGGGDKLVKLWGYDEGHCYFVGVAHSGAITAVGVTPDKQRIVSVGT 597
V +L G SG D VKLW C + H+G + + +PD + I S
Sbjct: 2 VKSLDFHPYGAYTASGSMDCNVKLWDIRRKGCIYTYKGHTGCVCCLRFSPDGRWIASASE 181
Query: 598 EGGIFIWDYQRPQTLADI 615
+G + +WD + L D+
Sbjct: 182 DGLVKLWDLTAGKLLTDL 235
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 43/118 (36%)
Frame = +2
Query: 496 KSVVYHPDESQLVTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVNALAVDRDGEALVSGGG 555
KS+ +HP + + D V WD I G V L DG + S
Sbjct: 5 KSLDFHPYGAYTASGSMDCNVKLWDIRRKGCIYTYKGH-TGCVCCLRFSPDGRWIASASE 181
Query: 556 DKLVKLWGYDEGHCYFVGVAHSGAITAVGVTPDKQRIVSVGTEGGIFIWDYQRPQTLA 613
D LVKLW G H A+ + P + + S + + WD + Q ++
Sbjct: 182 DGLVKLWDLTAGKLLTDLKLHRDAVNTIEFHPHEFLLASGSADRTVKFWDLETFQLIS 355
>12806
Length = 961
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 103/254 (40%), Gaps = 8/254 (3%)
Frame = +3
Query: 370 IAFTTDGSAILSGWSDGKIRAFGPQSGKIIFT-INDAHQKAVTAIASTADSSRILSGGEE 428
+A + D LS D +R + + G IN H + V +A + D+ +I SGG +
Sbjct: 183 LALSADSRFALSSSWDATLRLWDIKKGSTTSRFIN--HTRDVLTVAFSPDNRQIASGGRD 356
Query: 429 GMVRVWRI-GRTSQTLEASMKDHKGPVNCIRIKGSGDE--CVSASSDGSCILWDLHTFKR 485
+++W I G T++A+ H V C+R VSAS+D + +WD HT
Sbjct: 357 KNLKIWNIMGECKYTVDANA--HTDWVTCVRFHQDTKNPIVVSASNDKTIKVWDNHTM-- 524
Query: 486 RTSLFANTFFKSVVYHPDESQLVTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVNALAVDR 545
NTF G ++T A+D
Sbjct: 525 ---TLKNTF---------------VGHKAQIT------------------------ALDM 578
Query: 546 DGEALVSGGGDKLVKLWGYDEGHCYFVG-VAHSGAITAV--GVTPDKQRI-VSVGTEGGI 601
LVSG D + W EG FVG + I A+ + +K+++ + +GT+ GI
Sbjct: 579 STNYLVSGSKDGIAMTWNVAEG--SFVGKIDCDDQINAIKFNIENNKKKVWLFIGTQNGI 752
Query: 602 FIWDYQRPQTLADI 615
IWDY + + ++
Sbjct: 753 QIWDYSGEKKIKEL 794
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 1/142 (0%)
Frame = +3
Query: 46 PRSQEFLQGHSDKVSCLALSRSGRYLASGQITYMGFTADIIIWDLESKQLIHRMALHKVK 105
PR + L GHS +S LALS R+ S + A + +WD++ R H
Sbjct: 141 PR--KTLTGHSHFISDLALSADSRFALSS-----SWDATLRLWDIKKGSTTSRFINHTRD 299
Query: 106 VQALDFSCDERFLASLGGQDDNALVLWDV-ASGNAICGSPCNTNFTNCVKFFNNSPDKLI 164
V + FS D R +AS GG+D N L +W++ + +T++ CV+F ++ + ++
Sbjct: 300 VLTVAFSPDNRQIAS-GGRDKN-LKIWNIMGECKYTVDANAHTDWVTCVRFHQDTKNPIV 473
Query: 165 TAGNFNMNVWTYDAGNNKLRPT 186
+ + + + +D L+ T
Sbjct: 474 VSASNDKTIKVWDNHTMTLKNT 539
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 95/228 (41%), Gaps = 6/228 (2%)
Frame = +3
Query: 319 TAHNDKINGMAFPNEYSEVFATCGTGFIRLWHLTTCRELLRIAVPNLECFCIAFTTDGSA 378
T H+ I+ +A + ++ +RLW + R + +AF+ D
Sbjct: 156 TGHSHFISDLALSADSRFALSSSWDATLRLWDIKKGSTTSRFINHTRDVLTVAFSPDNRQ 335
Query: 379 ILSGWSDGKIRAFGPQSGKIIFTIN-DAHQKAVTAIASTADSSR--ILSGGEEGMVRVWR 435
I SG D ++ + G+ +T++ +AH VT + D+ ++S + ++VW
Sbjct: 336 IASGGRDKNLKIWNIM-GECKYTVDANAHTDWVTCVRFHQDTKNPIVVSASNDKTIKVW- 509
Query: 436 IGRTSQTLEASMKDHKGPVNCIRIKGSGDECVSASSDGSCILWDLHTFKRRTSLFANTFF 495
+ TL+ + HK + + + S + VS S DG + W++ + +
Sbjct: 510 -DNHTMTLKNTFVGHKAQITALDM--STNYLVSGSKDGIAMTWNVAEGSFVGKIDCDDQI 680
Query: 496 KSVVYHPDESQ---LVTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVNA 540
++ ++ + ++ + GT + WD I+ + S +D NA
Sbjct: 681 NAIKFNIENNKKKVWLFIGTQNGIQIWDYSGEKKIKELKASPIDPQNA 824
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Frame = +3
Query: 54 GHSDKVSCLALSRSGRYLASGQITYMGFTADIIIWDLESKQLIHRMALHKVKVQALDFSC 113
H+D V+C+ + + + + I +WD + L + HK ++ ALD S
Sbjct: 414 AHTDWVTCVRFHQDTK---NPIVVSASNDKTIKVWDNHTMTLKNTFVGHKAQITALDMST 584
Query: 114 DERFLASLGGQDDNALVLWDVASGNAICGSPCNTNFTNCVKFF--NNSPDKLITAGNFN- 170
+ +L S G D + W+VA G+ + C+ N +KF NN + G N
Sbjct: 585 N--YLVS--GSKDGIAMTWNVAEGSFVGKIDCDDQI-NAIKFNIENNKKKVWLFIGTQNG 749
Query: 171 MNVWTYDAGNNKLRPTDAT 189
+ +W Y +G K++ A+
Sbjct: 750 IQIWDY-SGEKKIKELKAS 803
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +3
Query: 538 VNALAVDRDGEALVSGGGDKLVKLWGYDEGHCYFVGVAHSGAITAVGVTPDKQRIVSVGT 597
++ LA+ D +S D ++LW +G + H+ + V +PD ++I S G
Sbjct: 174 ISDLALSADSRFALSSSWDATLRLWDIKKGSTTSRFINHTRDVLTVAFSPDNRQIASGGR 353
Query: 598 EGGIFIWD 605
+ + IW+
Sbjct: 354 DKNLKIWN 377
>27465
Length = 658
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Frame = -1
Query: 497 SVVYHPDESQLVTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVNALAVDRD-GEALVSGGG 555
+V ++ S +T DR WD + ++G + V A+A + G+ +++G
Sbjct: 346 NVAFNKSGSSFITGSYDRTCKIWDTASAEELHTLEGHR-NVVYAIAFNNPFGDKVITGSF 170
Query: 556 DKLVKLWGYDEGHCYFVGVAHSGAITAVGVTPDKQRIVSVGTEGGIFIWDYQRPQ 610
DK KLW +G CY H+ I V P I + + +WD ++ Q
Sbjct: 169 DKTCKLWSTADGKCYHTLRGHTAEIVCVSFNPSSTLIATGSMDTTCRLWDVEKAQ 5
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 51/129 (39%), Gaps = 7/129 (5%)
Frame = -1
Query: 399 IFTINDAHQKAVTAIASTADSSRILSGGEEGMVRVWRIGRTSQTLEASMKDHKGPVNCIR 458
+F + AH +T +A S ++G + ++W + +++ H+ V I
Sbjct: 385 LFKVLRAHILPLTNVAFNKSGSSFITGSYDRTCKIWDTASAEEL--HTLEGHRNVVYAIA 212
Query: 459 IKGS-GDECVSASSDGSCILWD------LHTFKRRTSLFANTFFKSVVYHPDESQLVTAG 511
GD+ ++ S D +C LW HT + T+ V ++P + + T
Sbjct: 211 FNNPFGDKVITGSFDKTCKLWSTADGKCYHTLRGHTAEIV-----CVSFNPSSTLIATGS 47
Query: 512 TDRKVTYWD 520
D WD
Sbjct: 46 MDTTCRLWD 20
>12574
Length = 521
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%)
Frame = +3
Query: 497 SVVYHPDESQLVTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVNALAVDRDGEALVSGGGD 556
+V + P+ L ++ D+ + W AYDG + I G L ++ +A D + L S D
Sbjct: 201 AVKFSPNGDWLASSSADKLIKIWGAYDGKFEKTIAGHKLG-LSDVAWSSDSKLLCSASDD 377
Query: 557 KLVKLWGYDEGHCYFVGVAHSGAITAVGVTPDKQRIVS 594
K +K+W + G C HS + P IVS
Sbjct: 378 KTLKIWEFSTGKCMKTLKGHSNYVFCCNFNPQSNLIVS 491
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%)
Frame = +3
Query: 52 LQGHSDKVSCLALSRSGRYLASGQITYMGFTADIIIWDLESKQLIHRMALHKVKVQALDF 111
L GH+ +S + S +G +LAS + I IW + +A HK+ + + +
Sbjct: 174 LAGHTKALSAVKFSPNGDWLASSSADKL-----IKIWGAYDGKFEKTIAGHKLGLSDVAW 338
Query: 112 SCDERFLASLGGQDDNALVLWDVASGNAICGSPCNTNFTNCVKFFNNSPDKLITAGNF 169
S D + L S DD L +W+ ++G + ++N+ C F N LI +G+
Sbjct: 339 SSDSKLLCS--ASDDKTLKIWEFSTGKCMKTLKGHSNYVFCCNF--NPQSNLIVSGSL 500
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 42/100 (42%)
Frame = +3
Query: 508 VTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVNALAVDRDGEALVSGGGDKLVKLWGYDEG 567
T+GT T Y ++ ++A+ +G+ L S DKL+K+WG +G
Sbjct: 114 ATSGTKSSATQKPTY---TLKFTLAGHTKALSAVKFSPNGDWLASSSADKLIKIWGAYDG 284
Query: 568 HCYFVGVAHSGAITAVGVTPDKQRIVSVGTEGGIFIWDYQ 607
H ++ V + D + + S + + IW++
Sbjct: 285 KFEKTIAGHKLGLSDVAWSSDSKLLCSASDDKTLKIWEFS 404
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/111 (19%), Positives = 50/111 (45%)
Frame = +3
Query: 406 HQKAVTAIASTADSSRILSGGEEGMVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGSGDE 465
H KA++A+ + + + S + ++++W G E ++ HK ++ +
Sbjct: 183 HTKALSAVKFSPNGDWLASSSADKLIKIW--GAYDGKFEKTIAGHKLGLSDVAWSSDSKL 356
Query: 466 CVSASSDGSCILWDLHTFKRRTSLFANTFFKSVVYHPDESQLVTAGTDRKV 516
SAS D + +W+ T K +L ++ + +S L+ +G+ +V
Sbjct: 357 LCSASDDKTLKIWEFSTGKCMKTLKGHSNYVFCCNFNPQSNLIVSGSLMRV 509
>21105
Length = 650
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Frame = +1
Query: 501 HPDESQLVTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVNALAVDRDGEALVSGGGDKLVK 560
HP +TA DR + ++D G I + + LD V +LAVD +G L+SG D ++
Sbjct: 91 HPTMPITITAHEDRHIRFFDNNTGKLIHAM-VAHLDSVTSLAVDPNGLYLLSGSHDCSIR 267
Query: 561 LWGYDEGHCYFVGVAHSG----AITAVGVTPDKQRIVSVGTEG 599
LW D C +H +I V P K I S G +
Sbjct: 268 LWNLDSKTCVQEITSHRKKFDESIHDVAFHPQKPYIASAGADA 396
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +1
Query: 380 LSGWSDGKIRAFGPQSGKIIFTINDAHQKAVTAIASTADSSRILSGGEEGMVRVWRIGRT 439
++ D IR F +GK+I + AH +VT++A + +LSG + +R+W +
Sbjct: 112 ITAHEDRHIRFFDNNTGKLIHAMV-AHLDSVTSLAVDPNGLYLLSGSHDCSIRLWNLD-- 282
Query: 440 SQTLEASMKDHK 451
S+T + H+
Sbjct: 283 SKTCVQEITSHR 318
>33180
Length = 460
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Frame = -2
Query: 368 FCIAFTTDGSAILSGWSDGKIRAFGPQSGKIIFTINDAHQKAVTAIASTADSSRIL-SGG 426
F + F++D + I+ G +DG + + +S + I DAH V A+A DSS+IL SGG
Sbjct: 441 FSLMFSSDNTEIVGGANDGCLYVYDRESNQRTLKI-DAHDDDVNAVAFADDSSQILYSGG 265
Query: 427 EEGMVRVW--RIGRTSQTLEAS-MKDHKGPVNCIRIKG 461
++G+ +VW R R L M H V I KG
Sbjct: 264 DDGLCKVWDRRTLREDNPLPVGIMAGHSDGVTYIDTKG 151
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -2
Query: 497 SVVYHPDESQLVTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVNALA-VDRDGEALVSGGG 555
S+++ D +++V D + +D ID D D+VNA+A D + L SGG
Sbjct: 438 SLMFSSDNTEIVGGANDGCLYVYDRESNQRTLKIDAHD-DDVNAVAFADDSSQILYSGGD 262
Query: 556 DKLVKLW 562
D L K+W
Sbjct: 261 DGLCKVW 241
>02147
Length = 1547
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 100/225 (44%), Gaps = 1/225 (0%)
Frame = +2
Query: 381 SGWSDGKIRAFGPQSGKIIFTINDAHQKAVTAIASTADSSRILSGGEEGMVRVWRIGRTS 440
+G +D + + + G+ + T +H+ V ++ + D + +L+G E +++V+ + T
Sbjct: 224 TGAADFSAKIWDAEKGEELQTF--SHKHIVKSVDFSHDGTALLTGSNEKLLKVFDLVNTD 397
Query: 441 QTLEASMKDHKGPVNCIRIKGSGDECVSASSDGSCILWDLHTFKRRTSLFANTFFKSVVY 500
+ S H + G +SAS D + LW L T + L +T S+
Sbjct: 398 AEPK-SFAGHTSNIKGALFLSDGKRIISASDDKTVRLWSLETCQEVQQLTFDTPPTSLTL 574
Query: 501 HPDESQLVTAGTDRKVTYWDAYDGNAIRIIDGSDLD-EVNALAVDRDGEALVSGGGDKLV 559
PD++ ++ + + + + Y + +R + + + +++ ++ + V+GG D +
Sbjct: 575 SPDKNTIIVTHS-QNIAF---YQADTLREMKKFEAEAPISSASLHQSERFFVAGGEDFKM 742
Query: 560 KLWGYDEGHCYFVGVAHSGAITAVGVTPDKQRIVSVGTEGGIFIW 604
+ Y+ G H G + V +PD + S +G + +W
Sbjct: 743 YKFDYETGKEIESFKGHFGPVHCVRFSPDGELYASGSEDGTLRLW 877
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 1/159 (0%)
Frame = +2
Query: 321 HNDKINGMAFPNEYSEVFATCGTGFIRLWHLTTCRELLRIAVPNLECFCIAFTTDGSAIL 380
H I G F ++ + + +RLW L TC+E+ ++ + + + D + I+
Sbjct: 422 HTSNIKGALFLSDGKRIISASDDKTVRLWSLETCQEVQQLTF-DTPPTSLTLSPDKNTII 598
Query: 381 SGWSDGKIRAFGPQSGKIIFTINDAHQKAVTAIASTADSSRI-LSGGEEGMVRVWRIGRT 439
S + + + +A + AS S R ++GGE+ ++++
Sbjct: 599 VTHS----QNIAFYQADTLREMKKFEAEAPISSASLHQSERFFVAGGED--FKMYKFDYE 760
Query: 440 SQTLEASMKDHKGPVNCIRIKGSGDECVSASSDGSCILW 478
+ S K H GPV+C+R G+ S S DG+ LW
Sbjct: 761 TGKEIESFKGHFGPVHCVRFSPDGELYASGSEDGTLRLW 877
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 84/224 (37%)
Frame = +2
Query: 347 RLWHLTTCRELLRIAVPNLECFCIAFTTDGSAILSGWSDGKIRAFGPQSGKIIFTINDAH 406
++W EL + ++ + F+ DG+A+L+G ++ ++ F + H
Sbjct: 248 KIWDAEKGEELQTFSHKHI-VKSVDFSHDGTALLTGSNEKLLKVFDLVNTDAEPKSFAGH 424
Query: 407 QKAVTAIASTADSSRILSGGEEGMVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGSGDEC 466
+ +D RI+S ++ VR+W + T Q ++ D P + + +
Sbjct: 425 TSNIKGALFLSDGKRIISASDDKTVRLWSL-ETCQEVQQLTFD--TPPTSLTLSPDKNTI 595
Query: 467 VSASSDGSCILWDLHTFKRRTSLFANTFFKSVVYHPDESQLVTAGTDRKVTYWDAYDGNA 526
+ S + + T + A S H E V G D K+ +D G
Sbjct: 596 IVTHSQ-NIAFYQADTLREMKKFEAEAPISSASLHQSERFFVAGGEDFKMYKFDYETGKE 772
Query: 527 IRIIDGSDLDEVNALAVDRDGEALVSGGGDKLVKLWGYDEGHCY 570
I G V+ + DGE SG D ++LW G Y
Sbjct: 773 IESFKGH-FGPVHCVRFSPDGELYASGSEDGTLRLWQTTIGRTY 901
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 61/149 (40%), Gaps = 1/149 (0%)
Frame = +2
Query: 446 SMKDHKGPVNCIRIKGSGDECVSASSDGSCILWDLHTFKRRTSLFANTFFKSVVYHPDES 505
+ + HKG V + + ++D S +WD + + KSV + D +
Sbjct: 158 TFEGHKGAVWGATLNREATRAATGAADFSAKIWDAEKGEELQTFSHKHIVKSVDFSHDGT 337
Query: 506 QLVTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVNALAVDRDGEALVSGGGDKLVKLWGYD 565
L+T ++ + +D + +A + DG+ ++S DK V+LW +
Sbjct: 338 ALLTGSNEKLLKVFDLVNTDAEPKSFAGHTSNIKGALFLSDGKRIISASDDKTVRLWSLE 517
Query: 566 EGHCYFV-GVAHSGAITAVGVTPDKQRIV 593
C V + T++ ++PDK I+
Sbjct: 518 T--CQEVQQLTFDTPPTSLTLSPDKNTII 598
>01327
Length = 2215
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 1/141 (0%)
Frame = +3
Query: 466 CVSASSDGSCILWDLHTFKRRTSLFA-NTFFKSVVYHPDESQLVTAGTDRKVTYWDAYDG 524
C+S S D S +L+D + + V Y + + +A D+ + W +
Sbjct: 84 CLSGSKDKSVVLYDYQNGRLEDRWTGHDREITKVCYGASCNGMFSASRDKTIKMWQRGNS 263
Query: 525 NAIRIIDGSDLDEVNALAVDRDGEALVSGGGDKLVKLWGYDEGHCYFVGVAHSGAITAVG 584
++IR G D+ V A+ ++ D L SG D V++W + G C +T V
Sbjct: 264 HSIRDFIGHDM-VVTAIHLNTDNTLLCSGSRDNTVRIWDVETGACLRQNNIPQNLVTDVK 440
Query: 585 VTPDKQRIVSVGTEGGIFIWD 605
P I+ G + + I+D
Sbjct: 441 WLPGSHLIIQAGEDKEVRIYD 503
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 94/231 (40%), Gaps = 12/231 (5%)
Frame = +3
Query: 304 IYKPATSRLKEELVQTAHNDKINGMAFPNEYSEVFATCGTGFIRLWHLTTCRELLRIAVP 363
+Y RL++ T H+ +I + + + +F+ I++W +
Sbjct: 117 LYDYQNGRLEDRW--TGHDREITKVCYGASCNGMFSASRDKTIKMWQRGNSHSIRDFIGH 290
Query: 364 NLECFCIAFTTDGSAILSGWSDGKIRAFGPQSGKIIFTINDAHQKAVTAIASTADSSRIL 423
++ I TD + + SG D +R + ++G + N+ Q VT + S I+
Sbjct: 291 DMVVTAIHLNTDNTLLCSGSRDNTVRIWDVETGACLRQ-NNIPQNLVTDVKWLPGSHLII 467
Query: 424 SGGEEGMVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGSGDECVSASS---DGSC--ILW 478
GE+ VR++ RT + + K ++C + G C++ S+ C LW
Sbjct: 468 QAGEDKEVRIYD-SRTLGIVRSFTKKQYIQMSC-DVTADGQFCLTCSNGFGGNGCEATLW 641
Query: 479 DL------HTFK-RRTSLFANTFFKSVVYHPDESQLVTAGTDRKVTYWDAY 522
L + FK R ++ A F S + D + + TA D V W+ +
Sbjct: 642 QLSDGSIQNEFKGHREAIEACLFLPS---NQDMTLIATASRDCSVRVWNMF 785
>01462
Length = 995
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 12/185 (6%)
Frame = +2
Query: 393 PQSGKIIFTINDAHQKAVTAIASTADSSRILSGGEEGMVRVWRIGRTSQTLEASMKDHKG 452
P+SG +F+ + + AV T R+ +G + + VW I Q L A M+ HK
Sbjct: 170 PRSG--VFSNAEVNSIAVDEKMGT---RRLYAGAGDRKIHVWDI-EAGQYLNA-MEGHKD 328
Query: 453 PVNCIRIKGSGDECVSASSDGSCILWDLHTFKRRTSLFANT------------FFKSVVY 500
++ + +K ECVSAS DG+ +WD+ + + + + +
Sbjct: 329 YIHKVVMKNDAQECVSASEDGTVRMWDIRSSTETVHCLEPSKNELCSRPLLGKWLRCLAL 508
Query: 501 HPDESQLVTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVNALAVDRDGEALVSGGGDKLVK 560
P+E LV G K++ W I D + + AL D E ++S G ++
Sbjct: 509 DPEEGWLVCGGGP-KLSAWHLRTLAPTTIFDTPSVSQNVALFHD---EFILSAGTSPVMN 676
Query: 561 LWGYD 565
W D
Sbjct: 677 HWRLD 691
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/150 (19%), Positives = 66/150 (44%), Gaps = 9/150 (6%)
Frame = +2
Query: 379 ILSGWSDGKIRAFGPQSGKIIFTINDAHQKAVTAIASTADSSRILSGGEEGMVRVWRIGR 438
+ +G D KI + ++G+ + + + H+ + + D+ +S E+G VR+W I
Sbjct: 242 LYAGAGDRKIHVWDIEAGQYLNAM-EGHKDYIHKVVMKNDAQECVSASEDGTVRMWDIRS 418
Query: 439 TSQTLEASMKDHKGPVNCIRIKGSGDECVSASSDGSCIL---------WDLHTFKRRTSL 489
+++T+ ++ K + + G C++ + ++ W L T T
Sbjct: 419 STETVHC-LEPSKNELCSRPLLGKWLRCLALDPEEGWLVCGGGPKLSAWHLRTLAPTTIF 595
Query: 490 FANTFFKSVVYHPDESQLVTAGTDRKVTYW 519
+ ++V DE +++AGT + +W
Sbjct: 596 DTPSVSQNVALFHDEF-ILSAGTSPVMNHW 682
>01249
Length = 1743
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 107/268 (39%), Gaps = 26/268 (9%)
Frame = -1
Query: 346 IRLWHLTTCRELLRIAVPNLECFCIAFTTDGSAILSGWSDGKIRAFGPQSGKIIFTINDA 405
I +W L+ E V + + + DG L+ S+ KI + G ++ ++D
Sbjct: 1545 IHVWPLSKKDESQHKIVCPGKVSVLVVSPDGLFCLASISE-KIYIWEMTGGSLVGLLSDF 1369
Query: 406 HQKAVTAIASTADSSRILSGGEEGMVRVWRIGR----TSQTLEA-----SMKDHKGPVNC 456
++ T I T D S+ + G + +W R TSQ ++ H P+
Sbjct: 1368 NE--ATKIQFTDDGSQFVVATSSGHLNIWDFARVVTTTSQRARGLKPGRTINAHSEPITG 1195
Query: 457 IRIK--GSGDECVSASSDGSCILWDLHTFKRRTSLFANTFFKSVVYHPDESQLVTAGTDR 514
+ + G S+SSDG+C LWD+ + ++ T ++ E + AG D
Sbjct: 1194 LHVGCGGPAARVASSSSDGTCKLWDMLSGALLRTMVYETGVGCLIMDKQE-HFLLAGLDN 1018
Query: 515 ----------KVTYWDAYDGNAI-----RIIDGSDLDEVNALAVDRDGEALVSGGGDKLV 559
+++ + + R++ G D V LA DG+ L SG + V
Sbjct: 1017 GDILCSPLFGQISQSEVFVSKHTTKAGERVLQGHS-DAVTCLAFSSDGQRLASGSQNGKV 841
Query: 560 KLWGYDEGHCYFVGVAHSGAITAVGVTP 587
+W + G + + SGA+ V + P
Sbjct: 840 IIWNMESGDSTSLDI--SGAVGNVMIIP 763
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = -1
Query: 49 QEFLQGHSDKVSCLALSRSGRYLASGQITYMGFTADIIIWDLES 92
+ LQGHSD V+CLA S G+ LASG +IIW++ES
Sbjct: 936 ERVLQGHSDAVTCLAFSSDGQRLASGS-----QNGKVIIWNMES 820
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 15/140 (10%)
Frame = -1
Query: 312 LKEELVQTAHNDKINGMAFP--NEYSEVFATCGTGFIRLWHLTTCRELLRIAVPNLECFC 369
LK AH++ I G+ + V ++ G +LW + + LLR V C
Sbjct: 1242 LKPGRTINAHSEPITGLHVGCGGPAARVASSSSDGTCKLWDMLS-GALLRTMVYETGVGC 1066
Query: 370 IAFTTDGSAILSGWSDGKIRA---FGPQSGKIIFT----------INDAHQKAVTAIAST 416
+ +L+G +G I FG S +F + H AVT +A +
Sbjct: 1065 LIMDKQEHFLLAGLDNGDILCSPLFGQISQSEVFVSKHTTKAGERVLQGHSDAVTCLAFS 886
Query: 417 ADSSRILSGGEEGMVRVWRI 436
+D R+ SG + G V +W +
Sbjct: 885 SDGQRLASGSQNGKVIIWNM 826
>02090
Length = 1841
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 72/179 (40%), Gaps = 1/179 (0%)
Frame = -3
Query: 427 EEGMVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGSGDECVSASSDGSCILWDLHTFKRR 486
E + +W + + ++A + + I G C S SDG+ +WDLH
Sbjct: 1698 EASTLSIWDLATPTPRIKAELTSSAPACYALAISPDGKVCFSCCSDGNIAVWDLHNQTLV 1519
Query: 487 TSLFANTFFKSVV-YHPDESQLVTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVNALAVDR 545
+T S + PD ++L T G D V WD +G ++ D S ++ +L
Sbjct: 1518 RQFQGHTDGASCIDISPDGTKLWTGGLDNTVRSWDLREGRQLQQHDFS--SQIFSLGYCP 1345
Query: 546 DGEALVSGGGDKLVKLWGYDEGHCYFVGVAHSGAITAVGVTPDKQRIVSVGTEGGIFIW 604
GE L G V++ + + Y + + H + ++ + VS G + + W
Sbjct: 1344 TGEWLAVGMESSNVEVLHHSKPDKYQLHL-HESCVLSLKFAYCGKWFVSTGKDNLLNAW 1171
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = -3
Query: 367 CFCIAFTTDGSAILSGWSDGKIRAFGPQSGKIIFTINDAHQKAVTAIASTADSSRILSGG 426
C+ +A + DG S SDG I + + ++ H + I + D +++ +GG
Sbjct: 1617 CYALAISPDGKVCFSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISPDGTKLWTGG 1441
Query: 427 EEGMVRVW--RIGRTSQTLEASMK 448
+ VR W R GR Q + S +
Sbjct: 1440 LDNTVRSWDLREGRQLQQHDFSSQ 1369
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 66/162 (40%), Gaps = 35/162 (21%)
Frame = -3
Query: 26 DGRTIIYPLGSTIVLRDRADPRSQEFLQGHSDKVSCLALS-------------------- 65
DG ++ L + ++R QGH+D SC+ +S
Sbjct: 1563 DGNIAVWDLHNQTLVRQ---------FQGHTDGASCIDISPDGTKLWTGGLDNTVRSWDL 1411
Query: 66 RSGRYLA----SGQITYMGF--TADIIIWDLESK--QLIH-------RMALHKVKVQALD 110
R GR L S QI +G+ T + + +ES +++H ++ LH+ V +L
Sbjct: 1410 REGRQLQQHDFSSQIFSLGYCPTGEWLAVGMESSNVEVLHHSKPDKYQLHLHESCVLSLK 1231
Query: 111 FSCDERFLASLGGQDDNALVLWDVASGNAICGSPCNTNFTNC 152
F+ ++ S G DN L W G +I S +++ +C
Sbjct: 1230 FAYCGKWFVSTG--KDNLLNAWRTPYGASIFQSKESSSVLSC 1111
>03387
Length = 1891
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 100/262 (38%), Gaps = 39/262 (14%)
Frame = +1
Query: 386 GKIRAFGPQSGKIIFTINDAHQKAVTA----------IASTADSSRILSGGEEGMVRVWR 435
G+ FG SGKI I H+ V IA+ SS +L
Sbjct: 139 GEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLV----------- 285
Query: 436 IGRTSQTLEASMKDHKGP-VNCIRIKGSGDE-------------CVSASSDGSCILWDLH 481
T S D G + +R+KG E +SAS D + LWD++
Sbjct: 286 ---FDYTKHPSKPDPSGECIPELRLKGHQKEGYGLSWNPNLNGHLLSASDDHTICLWDIN 456
Query: 482 TFKRRTSLF-ANTFF-------KSVVYH-PDESQLVTAGTDRKVTYWDAYDGNAIR---I 529
+ +R + + A+T F + V +H ES + D+K+ WD + +
Sbjct: 457 STQRESRVVDAHTIFTGHTSVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHV 636
Query: 530 IDGSDLDEVNALAVDRDGE-ALVSGGGDKLVKLWGYDEGHCYFVGV-AHSGAITAVGVTP 587
+D EVN L+ + E L +G DK V LW +H I V +P
Sbjct: 637 VDAHTA-EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 813
Query: 588 DKQRIV-SVGTEGGIFIWDYQR 608
+ I+ S GT+ + +WD +
Sbjct: 814 HNETILASSGTDRRLHVWDLSK 879
>03156
Length = 1014
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 47/108 (43%)
Frame = +1
Query: 498 VVYHPDESQLVTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVNALAVDRDGEALVSGGGDK 557
V Y + + +A D+ + W + ++IR G D+ V A+ ++ D L SG D
Sbjct: 73 VCYGASCNGMFSASRDKTIKMWQRGNSHSIRDFIGHDM-VVTAIHLNTDNTLLCSGSRDN 249
Query: 558 LVKLWGYDEGHCYFVGVAHSGAITAVGVTPDKQRIVSVGTEGGIFIWD 605
V++W + G C +T V P I+ G + + I+D
Sbjct: 250 TVRIWDVETGACLRQNNIPQNLVTDVKWLPGSHLIIQAGEDKEVRIYD 393
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 88/216 (40%), Gaps = 12/216 (5%)
Frame = +1
Query: 319 TAHNDKINGMAFPNEYSEVFATCGTGFIRLWHLTTCRELLRIAVPNLECFCIAFTTDGSA 378
T H+ +I + + + +F+ I++W + ++ I TD +
Sbjct: 46 TGHDREITKVCYGASCNGMFSASRDKTIKMWQRGNSHSIRDFIGHDMVVTAIHLNTDNTL 225
Query: 379 ILSGWSDGKIRAFGPQSGKIIFTINDAHQKAVTAIASTADSSRILSGGEEGMVRVWRIGR 438
+ SG D +R + ++G + N+ Q VT + S I+ GE+ VR++ R
Sbjct: 226 LCSGSRDNTVRIWDVETGACLRQ-NNIPQNLVTDVKWLPGSHLIIQAGEDKEVRIYD-SR 399
Query: 439 TSQTLEASMKDHKGPVNCIRIKGSGDECVSASS---DGSC--ILWDL------HTFK-RR 486
T + + K ++C + G C++ S+ C LW L + FK R
Sbjct: 400 TLGIVRSFTKKQYIQMSC-DVTADGQFCLTCSNGFGGNGCEATLWQLSDGSIQNEFKGHR 576
Query: 487 TSLFANTFFKSVVYHPDESQLVTAGTDRKVTYWDAY 522
++ A F S + D + + TA D V W+ +
Sbjct: 577 EAIEACLFLPS---NQDMTLIATASRDCSVRVWNMF 675
>17602
Length = 481
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 3/141 (2%)
Frame = +3
Query: 320 AHNDKINGMAFPNEYSEVFATCGTGFIRLWHLTTCRELLR-IAVPNLECFCIAFTTDGSA 378
AH+D + + F + S + ++ G R+W + + L I N + F+ +G
Sbjct: 48 AHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLXTLIDDDNPPVSFVKFSPNGKY 227
Query: 379 ILSGWSDGKIRAFGPQSGKIIFTI--NDAHQKAVTAIASTADSSRILSGGEEGMVRVWRI 436
IL+ D ++ + GK + T + + + A S I+SG E+ MV +W +
Sbjct: 228 ILAATLDNTLKLWDYSKGKCLKTYVGHRNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNL 407
Query: 437 GRTSQTLEASMKDHKGPVNCI 457
+ EA+ +G V C+
Sbjct: 408 LDQGDSTEATGSHRRGAVLCL 470
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Frame = +3
Query: 477 LWDLHTFKRRTSLFANT-FFKSVVYHPDESQLVTAGTDRKVTYWDAYDGNAIRIIDGSDL 535
+WD+ T K +L A++ +V ++ D S +V++ D WD G + + D
Sbjct: 6 IWDVKTGKCLKTLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLXTLIDDDN 185
Query: 536 DEVNALAVDRDGEALVSGGGDKLVKLWGYDEGHCYFVGVAHSG---AITAVGVTPDKQRI 592
V+ + +G+ +++ D +KLW Y +G C V H I A + I
Sbjct: 186 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYVGHRNEKYCIFANFSVTGGKWI 365
Query: 593 VSVGTEGGIFIWD 605
VS + ++IW+
Sbjct: 366 VSGSEDNMVYIWN 404
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 3/137 (2%)
Frame = +3
Query: 347 RLWHLTTCRELLRIAVPNLECFCIAFTTDGSAILSGWSDGKIRAFGPQSGKIIFTINDAH 406
R+W + T + L + + + F DGS I+S DG R + SG+ + T+ D
Sbjct: 3 RIWDVKTGKCLKTLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLXTLIDDD 182
Query: 407 QKAVTAIASTADSSRILSGGEEGMVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGS---G 463
V+ + + + IL+ + +++W + + L+ + H+ CI S G
Sbjct: 183 NPPVSFVKFSPNGKYILAATLDNTLKLWDYSK-GKCLKTYVG-HRNEKYCIFANFSVTGG 356
Query: 464 DECVSASSDGSCILWDL 480
VS S D +W+L
Sbjct: 357 KWIVSGSEDNMVYIWNL 407
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = +3
Query: 560 KLWGYDEGHCYFVGVAHSGAITAVGVTPDKQRIVSVGTEGGIFIWDYQRPQTL 612
++W G C AHS +TAV D IVS +G IWD Q L
Sbjct: 3 RIWDVKTGKCLKTLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 161
>13335
Length = 863
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 5/117 (4%)
Frame = +1
Query: 476 ILWDLHT--FKRRTSLFANTFFKSVVYHPDESQLVTAGTDRKVTYWDAYDGNAIRIIDGS 533
I+WD+ T K + + + + P S LV+ D + W+ +R G
Sbjct: 7 IVWDVKTGSIKGEYQHASKSSIRVCKFSPSSSHLVSGSDDDTICMWEVATQKLVRSYVGH 186
Query: 534 DLDEVNALAVDRDGEALVSGGGDKLVKLWGYDEGHCYFVGV---AHSGAITAVGVTP 587
+ D V ALA +G LVSG + + +W GHC + + AH +T +P
Sbjct: 187 E-DSVMALAYSPNGHYLVSGSPNGDLYVWDASFGHCRHLTLRVDAHDLGVTCCEFSP 354
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 69/188 (36%), Gaps = 23/188 (12%)
Frame = +1
Query: 451 KGPVNCIRIKGSGDECVSASSDGSCILWDLHTFKR-RTSLFANTFFKSVVYHPDESQLVT 509
K + + S VS S D + +W++ T K R+ + ++ Y P+ LV+
Sbjct: 61 KSSIRVCKFSPSSSHLVSGSDDDTICMWEVATQKLVRSYVGHEDSVMALAYSPNGHYLVS 240
Query: 510 AGTDRKVTYWDAYDGNAIRI---IDGSDLDEVNALAVDRDGEA-----------LVSGGG 555
+ + WDA G+ + +D DL G A L +GG
Sbjct: 241 GSPNGDLYVWDASFGHCRHLTLRVDAHDLGVTCCEFSPTFGTACAENSSTCNLLLATGGK 420
Query: 556 DKLVKLWGYDEG--------HCYFVGVAHSGAITAVGVTPDKQRIVSVGTEGGIFIWDYQ 607
D L+KLW + C + HS + A +P + S + + +WD
Sbjct: 421 DNLIKLWTFSAQVGSPEVTLQCRDILSGHSDLVMACAFSPSSALLASGSFDKSVRLWDSV 600
Query: 608 RPQTLADI 615
+ L I
Sbjct: 601 KGVALFSI 624
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 70/165 (42%), Gaps = 23/165 (13%)
Frame = +1
Query: 37 TIVLRDRADPRSQEFLQGHSDKVSCLALSRSGRYLASGQITYMGFTADIIIWDL---ESK 93
TI + + A + GH D V LA S +G YL SG D+ +WD +
Sbjct: 130 TICMWEVATQKLVRSYVGHEDSVMALAYSPNGHYLVSGSP-----NGDLYVWDASFGHCR 294
Query: 94 QLIHRMALHKVKVQALDFS------CDE-----RFLASLGGQDDNALVLWDVASGNAICG 142
L R+ H + V +FS C E L + GG+ DN + LW + A G
Sbjct: 295 HLTLRVDAHDLGVTCCEFSPTFGTACAENSSTCNLLLATGGK-DNLIKLWTFS---AQVG 462
Query: 143 SP-----CN---TNFTNCVKFFNNSPDK-LITAGNFNMNVWTYDA 178
SP C + ++ V SP L+ +G+F+ +V +D+
Sbjct: 463 SPEVTLQCRDILSGHSDLVMACAFSPSSALLASGSFDKSVRLWDS 597
>15780
Length = 735
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 29/56 (51%)
Frame = -1
Query: 507 LVTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVNALAVDRDGEALVSGGGDKLVKLW 562
L TAG D V WD G A+ + + D V AL RDG L SGG D ++LW
Sbjct: 729 LSTAGADHTVIVWDIASGTAVAHL-TAHTDTVYALCFSRDGTVLASGGMDNSIRLW 565
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = -1
Query: 85 IIIWDLESKQLIHRMALHKVKVQALDFSCDERFLASLGGQDDNALVLWDVA 135
+I+WD+ S + + H V AL FS D LAS GG DN++ LWD+A
Sbjct: 702 VIVWDIASGTAVAHLTAHTDTVYALCFSRDGTVLAS-GGM-DNSIRLWDLA 556
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = -1
Query: 37 TIVLRDRADPRSQEFLQGHSDKVSCLALSRSGRYLASGQITYMGFTADIIIWDL 90
T+++ D A + L H+D V L SR G LASG G I +WDL
Sbjct: 705 TVIVWDIASGTAVAHLTAHTDTVYALCFSRDGTVLASG-----GMDNSIRLWDL 559
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = -1
Query: 550 LVSGGGDKLVKLWGYDEGHCYFVGVAHSGAITAVGVTPDKQRIVSVGTEGGIFIWDYQR 608
L + G D V +W G AH+ + A+ + D + S G + I +WD R
Sbjct: 729 LSTAGADHTVIVWDIASGTAVAHLTAHTDTVYALCFSRDGTVLASGGMDNSIRLWDLAR 553
>02960
Length = 1577
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 74/184 (40%), Gaps = 27/184 (14%)
Frame = +2
Query: 406 HQKAVTAIASTADSSRILSGGEEGMVRVWRI-----GRTSQTLEA--------------- 445
H +V +A + DS ++ +G + M+++W G S+ E
Sbjct: 752 HAASVDCVAVSPDSQQMCTGSWDKMLKLWSTDCNVDGDQSEDTERPSKKKKSAKSTTQTR 931
Query: 446 ----SMKDHKGPVNCIRIKGSGDECVSASSDGSCILWDLHTFKRRTSLFANTFFKSVVYH 501
++ H V+ +R V++S D S LWDLHT ++ + + + V Y
Sbjct: 932 VPVLTLSGHAEAVSAVRWLDPH-RVVTSSWDHSLRLWDLHTAQQTSLIQGSKAVLDVAYS 1108
Query: 502 PDESQLVTAGTDRKVTYWDAY--DGNAIRIIDGSDLDEVNALAVDRDGEAL-VSGGGDKL 558
P L+T DR V D +G ++ S V + E L +SG D +
Sbjct: 1109PLSHMLITGSADRHVRLVDPRCSEGETVKCAFTSHTGWVTGVDWSPTREHLFLSGSYDNV 1288
Query: 559 VKLW 562
+KLW
Sbjct: 1289LKLW 1300
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
Frame = +2
Query: 513 DRKVTYWDAYDGNAIRIIDGSDLDEVNALAVDRDGEA-----LVSGGGDKLVKLWGY--- 564
D V W + G AI I G V +A + E+ V+G D+ +W +
Sbjct: 542 DNTVRLW-STKGEAIMTIPGH-TSPVKCVAWIKHDESSGVSTFVTGSHDQTALVWQWQRE 715
Query: 565 -DEGHCYFVGVAHSGAITAVGVTPDKQRIVSVGTEGGIFIW 604
+E C H+ ++ V V+PD Q++ + + + +W
Sbjct: 716 TNEVDCRLSCRGHAASVDCVAVSPDSQQMCTGSWDKMLKLW 838
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 538 VNALAVDRDGEALVSGGGDKLVKLWGYD 565
V+ +AV D + + +G DK++KLW D
Sbjct: 764 VDCVAVSPDSQQMCTGSWDKMLKLWSTD 847
>01598
Length = 1545
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 83/209 (39%), Gaps = 30/209 (14%)
Frame = +1
Query: 422 ILSGGEEGMVRVWRIGRTSQTLEASMKDHKGP-----------VNCIRIKGSGDECVSAS 470
I +G ++ +RVW + + Q + + + + +K + ++ VS+S
Sbjct: 109 IATGSKDRTIRVWTLSQGKQIFMKKLPNQRREAGDTGSRFKVWLAIHWLKSNPEQLVSSS 288
Query: 471 SDGSCILWDLHTFKRRTSLFANTFFKSVVYHP-------------DESQLVTAGTDRKVT 517
S G +LW L R T A F++ Y P D L T DR+V
Sbjct: 289 SGGDLLLWSL----RYTKGQAYQTFQTSDYRPHMRPVFNICASGPDSKTLCTFAQDRQVV 456
Query: 518 YWDAYDGNAIRIID--GSDLDEVNALAVDRDGEALVSGGGDKLVKLWGY-DEGHCYFVGV 574
WD A+ + G + V +D A+ G GD +++ W ++ + Y V
Sbjct: 457 LWDLETMEAVASMATLGGHVYCVRTSPIDPGRVAV--GVGDSMIRTWNMSNKTNPYDVTT 630
Query: 575 AHSG---AITAVGVTPDKQRIVSVGTEGG 600
G +TAV P K+ + GT+ G
Sbjct: 631 LWQGIKSKVTAVAWHPTKEGWLGFGTDDG 717
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 4/201 (1%)
Frame = +1
Query: 419 SSRILSGGEEGMVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGSGDECVSA--SSDGSCI 476
SS +LS GE+ + +Q + A D + + S D+ +A + +GS
Sbjct: 883 SSAVLSRGEKKANAI----DITQKIGAVNSDQVKGLKATELSWSPDQNAAAVGTDEGSVY 1050
Query: 477 LWDLHTFKRRTSLFANT-FFKSVVYHPDESQLVTAGTDRKVTYWDAYDGNAIRIIDGSDL 535
+ + K ++ V +HP + AG+ +W A GN ++I DL
Sbjct: 1051 VVTIQDLKIVAAIRTQQKLINCVRWHPRLTDQSPAGS--PCCHWLAAAGND-QVIHVVDL 1221
Query: 536 DEVNALAVDRDGEALVSGGGDKLVKLWGYDEGHCYFVGVAHSGAITAVGVTPDKQ-RIVS 594
V A +R+G+ S L +L G HS +T + +P R+VS
Sbjct: 1222 ASVFA---EREGDKETSLILTSLRELSG------------HSQRVTDMSWSPHHDARLVS 1356
Query: 595 VGTEGGIFIWDYQRPQTLADI 615
VG + F+WD Q+ LA
Sbjct: 1357 VGYDAEAFVWDVQKGTALAQF 1419
>31384
Length = 474
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = -1
Query: 419 SSRILSGGEEGMVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGSGDECVSASSDGSCILW 478
S+ ++SG + V W + ++ QT+ + + H GPV + G + +AS D + +W
Sbjct: 231 STFLISGSWDNKVSCWEVQQSGQTIPKAQQTHTGPVLDVDWSDDGTKVFTASCDKTAKVW 52
Query: 479 DLHT 482
DL++
Sbjct: 51 DLNS 40
>11493
Length = 535
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Frame = -2
Query: 410 VTAIASTADSSRILSGGEEGMVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGSGDECVSA 469
+ ++ D ++ GGE + +W + + ++A + + I C S
Sbjct: 330 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSAAPACYALAISPDSKVCFSC 151
Query: 470 SSDGSCILWDLHTFKRRTSLFANTFFKSVV-YHPDESQLVTAGTDRKV 516
SDG+ +WDLH +T S + PD S+L T G D V
Sbjct: 150 CSDGNIAVWDLHNEILVRQFQGHTDGASCIDISPDGSRLWTGGLDNTV 7
>12960
Length = 550
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%)
Frame = +2
Query: 370 IAFTTDGSAILSGWSDGKIRAFGPQSGKIIFTINDAHQKAVTAIASTADSSRILSGGEEG 429
+ F+ D ++ SD ++ + P ++ H V + D+S+I SGG +
Sbjct: 191 VRFSVDSRYCMTCGSDKSVKLWNPHR-ELFLKTYIGHGHEVLDAQGSGDNSQICSGGIDK 367
Query: 430 MVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGSGDECVSASSDGSCILWD 479
V ++ + + Q L +DH G VNC++ +S S D + WD
Sbjct: 368 TVVLFDVA-SGQALR-KYRDHAGTVNCVKFNEESTVILSGSLDNTVRAWD 511
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 46/110 (41%)
Frame = +2
Query: 496 KSVVYHPDESQLVTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVNALAVDRDGEALVSGGG 555
++V + D +T G+D+ V W+ + ++ G + ++A D + SGG
Sbjct: 185 RAVRFSVDSRYCMTCGSDKSVKLWNPHRELFLKTYIGHGHEVLDAQGSG-DNSQICSGGI 361
Query: 556 DKLVKLWGYDEGHCYFVGVAHSGAITAVGVTPDKQRIVSVGTEGGIFIWD 605
DK V L+ G H+G + V + I+S + + WD
Sbjct: 362 DKTVVLFDVASGQALRKYRDHAGTVNCVKFNEESTVILSGSLDNTVRAWD 511
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +2
Query: 126 DNALVLWDVASGNAICGSPCNTNFTNCVKFFNNSPDKLITAGNFNMNVWTYDAGNNKLRP 185
D +VL+DVASG A+ + NCVKF N +I +G+ + V +D + P
Sbjct: 362 DKTVVLFDVASGQALRKYRDHAGTVNCVKF--NEESTVILSGSLDNTVRAWDTRSRSHTP 535
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 29/68 (42%)
Frame = +2
Query: 375 DGSAILSGWSDGKIRAFGPQSGKIIFTINDAHQKAVTAIASTADSSRILSGGEEGMVRVW 434
D S I SG D + F SG+ + D H V + +S+ ILSG + VR W
Sbjct: 332 DNSQICSGGIDKTVVLFDVASGQALRKYRD-HAGTVNCVKFNEESTVILSGSLDNTVRAW 508
Query: 435 RIGRTSQT 442
S T
Sbjct: 509 DTRSRSHT 532
>10162
Length = 1629
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 7/181 (3%)
Frame = +3
Query: 409 AVTAIASTADSSRILSGGEEGMVRVWRI--GRTSQTLEASM----KDHKGPVNCIRIKGS 462
A+ + +AD++ I+SG + +V+ + G+ + +D V +
Sbjct: 375 AILCVDCSADNALIMSGCADATAKVFNVSSGKLXSAFNCAASQDSQDKDNSVESVAFCPV 554
Query: 463 GDECVSASSDGSCILWDLHTFKRRTSLFANTFFKSVVYHPDESQLVTAGTDRKVTYWDAY 522
+A++ GS +WDL T R S + + + L TA D + WDA
Sbjct: 555 SPYAATATNSGSVQVWDLPTSVARHSFQHPEGVCKLQWSSSTALLYTACLDGVMRVWDAR 734
Query: 523 DGNAIRIIDGSDLDE-VNALAVDRDGEALVSGGGDKLVKLWGYDEGHCYFVGVAHSGAIT 581
G + ++ G + + V RDG LVSG D ++ D FV V S +
Sbjct: 735 SGASKAVLTGHARNSCILDFDVTRDGTCLVSGSEDGTARVLT*DLHSRNFVSVILSAEMC 914
Query: 582 A 582
A
Sbjct: 915 A 917
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 422 ILSGGEEGMVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGSGDECVSASSDGSCILWDLH 481
+L+G + G V +W++ + ++ H P C +I +G SDG LWDL
Sbjct: 72 LLAGTQGGEVWLWQVPSQDYSKMKMLQSHGQPSLCGKILPNGKYVCVGYSDGVVKLWDLK 251
Query: 482 T 482
T
Sbjct: 252 T 254
>01768
Length = 1424
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +3
Query: 399 IFTINDAHQKAVTAIASTADSSRIL-SGGEEGMVRVW--RIGRTSQ-TLEASMKDHKGPV 454
+ T+ +AH + + I +L SGG++G++++W R+ R + +AS K H PV
Sbjct: 954 VLTVPEAHSRDINVINWNPIEKHLLASGGDDGIIKIWDLRMFRNKPVSAQASFKLHSQPV 1133
Query: 455 NCIRIKGSGDECVSAS-SDGSCILWDL 480
+ ++AS D +WD
Sbjct: 1134 TSLEWNPQDSSVLAASGEDDQITIWDF 1214
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 14/136 (10%)
Frame = +3
Query: 485 RRTSLFANT-FFKSVVYHPDESQL-VTAGTDRKVTYWDAYD----GNAIRIIDGS--DLD 536
++S A+T + V + P+E + + DR + W+ N + + + D++
Sbjct: 813 EKSSYAAHTDSVEDVQWSPNEGNVFASCSVDRTLRIWNTQQKPSKANVLTVPEAHSRDIN 992
Query: 537 EVNALAVDRDGEALVSGGGDKLVKLWGYDEGHCYFVGVA-----HSGAITAVGVTP-DKQ 590
+N +++ L SGG D ++K+W V HS +T++ P D
Sbjct: 993 VINWNPIEK--HLLASGGDDGIIKIWDLRMFRNKPVSAQASFKLHSQPVTSLEWNPQDSS 1166
Query: 591 RIVSVGTEGGIFIWDY 606
+ + G + I IWD+
Sbjct: 1167VLAASGEDDQITIWDF 1214
>13278
Length = 870
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%)
Frame = +1
Query: 81 FTADIIIWDLESKQLIHRMALHKVKVQALDFSCDERFLASLGGQDDNALVLWDVASGNAI 140
F + + +W++E +H + H+ V ++ FS D ++LAS G D + +W+V +G+ +
Sbjct: 136 FDSTVRLWEVERGLCLHTLTKHQEPVYSVAFSPDGKYLAS--GSFDKCVHIWNVQTGSLV 309
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +1
Query: 550 LVSGGGDKLVKLWGYDEGHCYFVGVAHSGAITAVGVTPDKQRIVSVGTEGGIFIWDYQ 607
L S D V+LW + G C H + +V +PD + + S + + IW+ Q
Sbjct: 121 LASASFDSTVRLWEVERGLCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNVQ 294
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +1
Query: 507 LVTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVNALAVDRDGEALVSGGGDKLVKLWGYDE 566
L +A D V W+ G + + + V ++A DG+ L SG DK V +W
Sbjct: 121 LASASFDSTVRLWEVERGLCLHTLTKHQ-EPVYSVAFSPDGKYLASGSFDKCVHIWNVQT 297
Query: 567 G---HCYFVGVAHSGAITAVGVTPDKQRIVSVGTEGGIFIWDYQR 608
G H Y +G I V ++ + ++G +F+ D ++
Sbjct: 298 GSLVHSY----KGTGGIFEVCWNHRGDKVGASASDGSVFVLDLRK 420
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 52 LQGHSDKVSCLALSRSGRYLASGQITYMGFTADIIIWDLESKQLIH 97
L H + V +A S G+YLASG F + IW++++ L+H
Sbjct: 190 LTKHQEPVYSVAFSPDGKYLASGS-----FDKCVHIWNVQTGSLVH 312
Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%)
Frame = +1
Query: 385 DGKIRAFGPQSGKIIFTINDAHQKAVTAIASTADSSRILSGGEEGMVRVWRIGRTSQTLE 444
D +R + + G + T+ HQ+ V ++A + D + SG + V +W + + +L
Sbjct: 139 DSTVRLWEVERGLCLHTLTK-HQEPVYSVAFSPDGKYLASGSFDKCVHIWNV--QTGSLV 309
Query: 445 ASMKDHKGPVNCIRIKGSGDECVSASSDGSCILWDL 480
S K G + + GD+ +++SDGS + DL
Sbjct: 310 HSYKG-TGGIFEVCWNHRGDKVGASASDGSVFVLDL 414
>18981
Length = 407
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%)
Frame = -2
Query: 501 HPDESQLVTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVNALAVDRDGEALVSGGGDKLVK 560
H ++ +++A TDR + W + + + G + D+V + + G +VSG DK +
Sbjct: 397 HLLDNMIISAATDRTLRVWCLKNTCLLHTLRGHN-DDVECVCIY--GRRVVSGSWDKTLI 227
Query: 561 LWGYDEGHCYFVGVAHSGAITAVGVTPDKQRIVSVGTEGGIFIWDYQRPQTL 612
+W D G H+ AITAV D+ + VS +G + W Q L
Sbjct: 226 VWEVDTGRPVHQLHGHTEAITAVQF--DEGKAVSGSADGDVRTWALDTGQCL 77
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Frame = -2
Query: 17 IENGLIAHPDGRTI-IYPLGSTIVLRDRADPRSQEFLQGHSDKVSCLALSRSGRYLASGQ 75
++N +I+ RT+ ++ L +T +L L+GH+D V C+ + GR + SG
Sbjct: 391 LDNMIISAATDRTLRVWCLKNTCLL---------HTLRGHNDDVECVCI--YGRRVVSG- 248
Query: 76 ITYMGFTADIIIWDLESKQLIHRMALHKVKVQALDFSCDERFLASLGGQDDNALVLWDVA 135
+ +I+W++++ + +H++ H + A+ F DE ++ G D + W +
Sbjct: 247 ----SWDKTLIVWEVDTGRPVHQLHGHTEAITAVQF--DEG--KAVSGSADGDVRTWALD 92
Query: 136 SGNAI 140
+G +
Sbjct: 91 TGQCL 77
>19140
Length = 573
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = -3
Query: 536 DEVNALAVDRDGEALVSGGGDKLVKLWGYDEGHCYFVGVAHSGAITAVGVTPDKQRIVSV 595
D V AL ++RDG +SG D ++LW + C H + A+ + S
Sbjct: 484 DNVKALVLNRDGTQCLSGSSDGTIRLWSLGQQRCVATFRVHDEGVWALQANESFTTLYSG 305
Query: 596 GTEGGIFIWDYQRP 609
G + ++ D + P
Sbjct: 304 GRDHQVWATDIKNP 263
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 2/153 (1%)
Frame = -3
Query: 353 TCRELLRIAVPNLECFCIAFTTDGSAILSGWSDGKIRAFGPQSGKIIFTINDAHQKAVTA 412
TC +L+++ + DG+ LSG SDG IR + + + T H + V A
Sbjct: 520 TCHKLMKLKGHTDNVKALVLNRDGTQCLSGSSDGTIRLWSLGQQRCVATFR-VHDEGVWA 344
Query: 413 IASTADSSRILSGGEEGMVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGSGDECVSASSD 472
+ + + + SGG + +VW + + + K PV + + + + ++
Sbjct: 343 LQANESFTTLYSGGRDH--QVWATDIKNPDNRELICEEKAPVLKLELTPTDPPSLWVATT 170
Query: 473 GSCIL-WDLHTFKRRTS-LFANTFFKSVVYHPD 503
SCI W + R S + N PD
Sbjct: 169 DSCIKNWPVRLPNPRASGEYDNDRIHPTATQPD 71
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -3
Query: 391 FGPQSGKIIFTINDAHQKAVTAIASTADSSRILSGGEEGMVRVWRIGR 438
GP++ + + H V A+ D ++ LSG +G +R+W +G+
Sbjct: 532 LGPRTCHKLMKLK-GHTDNVKALVLNRDGTQCLSGSSDGTIRLWSLGQ 392
>31864
Length = 545
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 15/156 (9%)
Frame = +2
Query: 434 WRIGRTSQTLEASMKDHKGPVNCIRIKGSGDECVSASSDGSCILWD------LHTFKRR- 486
W + R Q + S DH G +N +++ G V+AS D + L+D L T+K
Sbjct: 2 WDV-RKGQKVVDSGVDHTGGINDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTER 178
Query: 487 --TSLFANTFFKSVVYHPDESQLVTAGTDRKVTYWDA------YDGNAIRIIDGSDLDEV 538
S + VV + + T K +D+ Y+ R+ +
Sbjct: 179 PVNSAAISPILDHVVLGGGQDAMEVTTTSTKAGKFDSRFFHLIYEEEFARL--KGHFGPI 352
Query: 539 NALAVDRDGEALVSGGGDKLVKLWGYDEGHCYFVGV 574
N+LA DG++ SGG D V++ +D YF +
Sbjct: 353 NSLAFHPDGKSYASGGEDGFVRVKSFDS--TYFENI 454
>19498
Length = 903
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 71/204 (34%), Gaps = 35/204 (17%)
Frame = -1
Query: 426 GEEGMVRVWRIGRTSQTLEAS----------MKDHKGPVNCIRIKGSGDECVSASSDGSC 475
G+ G V +W + E + M H G VNC+R +G S D
Sbjct: 891 GDSGKVVIWNMAPIRDEKEEADDDVPRVLCQMDSHLGCVNCVRWSENGKFLASGGDDKLI 712
Query: 476 ILWDLHT-FKRRTSLFANT----FFKSV-------------VYHPDESQLVTAGTDRKVT 517
++W + F S +N ++SV + P + L + D +
Sbjct: 711 MIWQISRGFGSGKSFGSNVTILEHWRSVATLRGHAGDVLDLAWSPQDLWLASCSVDNTIV 532
Query: 518 YWDAYD-GNAIRIIDGSDLDEVNALAVDRDGEALVSGGGDKLVKLW---GYDEGHCYFVG 573
W+A + +I G V + D G L S DK +++W + E C
Sbjct: 531 VWNALKFSEQVAVIRGH-AGMVKGVTWDPVGRYLASQSDDKTLRVWRTSDWKEETCVKSC 355
Query: 574 VAHSGAITAV---GVTPDKQRIVS 594
G T V +PD +VS
Sbjct: 354 FKECGGTTHVLRLNWSPDGNHVVS 283
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 17/137 (12%)
Frame = -1
Query: 404 DAHQKAVTAIASTADSSRILSGGEEGMVRVWRIGR----------TSQTLE-----ASMK 448
D+H V + + + + SGG++ ++ +W+I R LE A+++
Sbjct: 795 DSHLGCVNCVRWSENGKFLASGGDDKLIMIWQISRGFGSGKSFGSNVTILEHWRSVATLR 616
Query: 449 DHKGPVNCIRIKGSGDECVSASSDGSCILWDLHTFKRRTSLFANT--FFKSVVYHPDESQ 506
H G V + S S D + ++W+ F + ++ K V + P
Sbjct: 615 GHAGDVLDLAWSPQDLWLASCSVDNTIVVWNALKFSEQVAVIRGHAGMVKGVTWDPVGRY 436
Query: 507 LVTAGTDRKVTYWDAYD 523
L + D+ + W D
Sbjct: 435 LASQSDDKTLRVWRTSD 385
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Frame = -1
Query: 27 GRTIIYPLGSTIVLRDRAD---PRSQEFLQGHSDKVSCLALSRSGRYLASG--------- 74
G+ +I+ + ++ AD PR + H V+C+ S +G++LASG
Sbjct: 882 GKVVIWNMAPIRDEKEEADDDVPRVLCQMDSHLGCVNCVRWSENGKFLASGGDDKLIMIW 703
Query: 75 QITY-----MGFTADIIIWDLESKQLIHRMALHKVKVQALDFSCDERFLASLGGQDDNAL 129
QI+ F +++ I LE + + + H V L +S + +LAS DN +
Sbjct: 702 QISRGFGSGKSFGSNVTI--LEHWRSVATLRGHAGDVLDLAWSPQDLWLASC--SVDNTI 535
Query: 130 VLWD 133
V+W+
Sbjct: 534 VVWN 523
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 17/90 (18%)
Frame = -1
Query: 533 SDLDEVNALAVDRDGEALVSGGGDKLVKLW----GYDEGHCYFVGV-------------A 575
S L VN + +G+ L SGG DKL+ +W G+ G + V
Sbjct: 792 SHLGCVNCVRWSENGKFLASGGDDKLIMIWQISRGFGSGKSFGSNVTILEHWRSVATLRG 613
Query: 576 HSGAITAVGVTPDKQRIVSVGTEGGIFIWD 605
H+G + + +P + S + I +W+
Sbjct: 612 HAGDVLDLAWSPQDLWLASCSVDNTIVVWN 523
>27270
Length = 1078
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 7/115 (6%)
Frame = +2
Query: 375 DGSAILSGWSDGKIRAFGPQSGKIIFTINDAHQKAVTAIASTADSSRILSGGEEGMVRVW 434
D + + G +DG + + ++ +N H KAVT + AD + S +G V W
Sbjct: 176 DSAVVAVGSADGSVGLYSVETHTYTHMLNKGHSKAVTDMCWRADGRTLYSSSLDGHVIGW 355
Query: 435 RIG--RTSQTLEASMKDHKGPVNCIRIKGSGDECVSASS-----DGSCILWDLHT 482
+ + +A+ H G V+C+ C+ +SS D + +WDL T
Sbjct: 356 NVNTLHMIEKWKATSGRHHG-VHCV--------CLCSSSRLLTADHTIKMWDLTT 493
>26939
Length = 388
Score = 34.3 bits (77), Expect = 0.14, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 463 GDECVSASSDGSCILWDLHTFKRRTSLFANTFF-KSVVYHPDESQLVTAGTDRKVTYWD 520
G VSAS D + +WDL + +L+A+ F S+ +H +++ D+ V W+
Sbjct: 2 GKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 178
>12140
Length = 727
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 60/142 (42%), Gaps = 24/142 (16%)
Frame = +2
Query: 402 INDAHQ---KAVTAIASTADSS------------RILSGGEEGMVRVWRIGRTSQTLEAS 446
IN+AH AV+ STA ++ R +SGG + +V++WR T +
Sbjct: 164 INNAHTIGCNAVSWAPSTAPNALFDQSARQQPVKRFVSGGCDNLVKIWREDETGWVEDQK 343
Query: 447 MKDHKGPVNCIRIKGS----GDECVSASSDGSCILW-DLHTFKRRTSLFANTFFKSVVYH 501
++ H V + S + S S D I+W + + + TS N F VV+H
Sbjct: 344 LEGHSDWVRDVAWAPSIGLPRNVIASCSQDCRVIIWTNDGSSNQWTSRILNK-FSDVVWH 520
Query: 502 PDESQ----LVTAGTDRKVTYW 519
S L +G D KVT W
Sbjct: 521 VSWSVTGNILAVSGGDNKVTLW 586
>02948
Length = 1207
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = -2
Query: 492 NTFFKSVVYHPDESQLVTAGTDRKVTYWDAYDGN-AIRIIDGSDLDEVNALAVDRDGEAL 550
N F V HP + + T K+T+W +D + + + V LA +G L
Sbjct: 756 NAAFTCVSCHPTDVCIATGHASGKITFWWNFDQDKTVLSVSHWHSLPVTCLAFTPEGSCL 577
Query: 551 VSGGGDKLVKLWGYDEGHCYFV 572
+SGG + + W + H F+
Sbjct: 576 LSGGHECTLVRWQMNSEHKEFL 511
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Frame = -2
Query: 369 CIAFTTDGSAILSGWSDGKIRAF-GPQSGKIIFTINDAHQKAVTAIASTADSSRILSGGE 427
C++ I +G + GKI + K + +++ H VT +A T + S +LSGG
Sbjct: 741 CVSCHPTDVCIATGHASGKITFWWNFDQDKTVLSVSHWHSLPVTCLAFTPEGSCLLSGGH 562
Query: 428 EGMVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGSGDECVSASSD 472
E + W++ + + P++ I + G V+ SD
Sbjct: 561 ECTLVRWQMNSEHKEFLPRL---GAPLHNIVVSPDGVFFVTGHSD 436
>29912
Length = 510
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Frame = +3
Query: 5 LVLNSVIGFGGAIENGLIAHPDGRTIIYPLGSTIVLRDRADPRSQEFLQGHSDKVSCLAL 64
L NS I G+ +G I H D R + +G+ L GHS +V L
Sbjct: 153 LSWNSFIVSSGS-RSGNIHHHDVRVADHHVGT---------------LSGHSQEVCGLRW 284
Query: 65 SRSGRYLASGQITYMGFTADIIIWDLE-----SKQLIHRMALHKVKVQALDF-SCDERFL 118
S G+YLASG + + +W + S Q +H + H+ V+AL + L
Sbjct: 285 SPDGKYLASGANDNL-----LCVWPAQVTGGNSTQPLHTFSQHQAAVKALAWCPWQPSXL 449
Query: 119 ASLGG 123
AS GG
Sbjct: 450 ASGGG 464
>20662
Length = 1220
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 6/145 (4%)
Frame = +2
Query: 375 DGSAILSGWSDGKIRAFGPQSGKIIFTINDA---HQKAVTAIASTADSSRILSGGEEGMV 431
D +L G G + + Q +F++ + H +++ +D S LS + +
Sbjct: 281 DSHKVLVGLDTGGVALWELQDEDKMFSMLSSACEHDDMTASVSINSDXSHYLSASYDHGI 460
Query: 432 RVWRIGRTSQTLEASMKDHKGPVNCIRIKGSGDECVSASSDGSCILWDLHTFKRRTSL-F 490
+VW TS + D V C + + +S S DG +LWD+ K T L
Sbjct: 461 KVWNTDLTSLYTYRAHSDIVWDVQCHPTEPA--LFLSCSQDGKIVLWDVRESKPATCLPK 634
Query: 491 ANTFFKS--VVYHPDESQLVTAGTD 513
++ FK V + P+ + G +
Sbjct: 635 CSSGFKPTCVQWQPNARNMYAVGDE 709
>14555
Length = 627
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 450 HKGPVNCIRIKGSGDECVSASSDGSCILWDLH 481
H+ +NC+R SGD + S D +C L+DL
Sbjct: 602 HEADINCVRFYPSGDAFATGSDDATCRLFDLR 507
>26107
Length = 1338
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 59/159 (37%), Gaps = 1/159 (0%)
Frame = -3
Query: 405 AHQKAVTAIASTADSSRILSGGEEGMVRVWRIGRTSQTLEASMKDHKGPVNCI-RIKGSG 463
AH AV + ++ S+ L+ + V +W + T++ + HK V + S
Sbjct: 1093 AHNNAVFDYSWISNDSQCLTASGDQTVALWDVETTTKV--TTFIGHKCSVRSVASCPSSP 920
Query: 464 DECVSASSDGSCILWDLHTFKRRTSLFANTFFKSVVYHPDESQLVTAGTDRKVTYWDAYD 523
+C S + DG +LWD K+R + + P R++
Sbjct: 919 AQCASGARDGHIMLWDSRVNKKREHQPCSQVHQVC---PQSGHQSKPAKHRRIHRAAGPK 749
Query: 524 GNAIRIIDGSDLDEVNALAVDRDGEALVSGGGDKLVKLW 562
G ++D V + D + SG D VK+W
Sbjct: 748 G----VMDTQ--QSVTCVLYQTDNLIISSGANDGCVKMW 650
>37180
Length = 681
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 37/81 (45%)
Frame = +1
Query: 404 DAHQKAVTAIASTADSSRILSGGEEGMVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGSG 463
+ H + ++ + + +++ ++ R+W R S L + H PV + SG
Sbjct: 10 NGHDQELSDVHAHPTQRLVVTSSKDMTFRLWDF-RDSALLVNVFQGHTQPVTSA-VFASG 183
Query: 464 DECVSASSDGSCILWDLHTFK 484
D+ VS S D + +WD+ +
Sbjct: 184 DKVVSGSDDRTVRVWDMRNMR 246
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 501 HPDESQLVTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVNALAVDRDGEALVSGGGDKLVK 560
HP + +VT+ D WD D + + V + AV G+ +VSG D+ V+
Sbjct: 46 HPTQRLVVTSSKDMTFRLWDFRDSALLVNVFQGHTQPVTS-AVFASGDKVVSGSDDRTVR 222
Query: 561 LW 562
+W
Sbjct: 223 VW 228
>14500
Length = 1238
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = +2
Query: 52 LQGHSDKVSCLALSRSGRYLASGQITYMGFTADIIIWDLE-----SKQLIHRMALHKVKV 106
L GHS +V L S G+YLASG + + +W + S Q +H + H+ V
Sbjct: 47 LSGHSQEVCGLRWSPDGKYLASGANDNL-----LCVWPAQVTGGNSTQPLHTFSQHQAAV 211
Query: 107 QAL 109
+AL
Sbjct: 212 KAL 220
>19863
Length = 502
Score = 31.6 bits (70), Expect = 0.88, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 463 GDECVSASSDGSCILWDLHTFKRRTSLFANT-FFKSVVYHPDESQLVTAGTDRKVTYWDA 521
G + VS SSD S ++WD+ ++ L + + V + D+ L++ D V W+
Sbjct: 7 GLQLVSGSSDMSIVVWDVENGVQKLRLQGHAGWVNDVHFSQDQCWLLSCSNDNTVRIWNI 186
Query: 522 YDGNAIRII 530
+ + I I+
Sbjct: 187 EESDQIPIV 213
Score = 28.5 bits (62), Expect = 9.0, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +1
Query: 503 DESQLVTAGTDRKVTYWDAYDGNAIRIIDGSDLDEVNALAVDRDGEALVSGGGDKLVKLW 562
D QLV+ +D + WD +G + G VN + +D L+S D V++W
Sbjct: 4 DGLQLVSGSSDMSIVVWDVENGVQKLRLQGH-AGWVNDVHFSQDQCWLLSCSNDNTVRIW 180
Query: 563 GYDE 566
+E
Sbjct: 181 NIEE 192
>04358
Length = 2430
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 520 DAYDGNAIRIIDGSDLDEVNALAVDRDGEALVSGGGDKLVKLWGYD 565
D + +R + G D V L D+ + LV+GG D ++ LW D
Sbjct: 2101 DLEEVKVVRSLSGGHTDTVRCLHWDKQTQTLVTGGEDSMLCLWSSD 2238
>08679
Length = 2028
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 58/161 (36%), Gaps = 10/161 (6%)
Frame = -3
Query: 370 IAFTTDGSAILSGW------SDGKIRAFGPQSGKIIFTINDAHQKAVTAIASTADSSRIL 423
+A D LS W DG + + P SG I + + + DS+ L
Sbjct: 1903 LAMAGDKCGSLSFWDVGTENQDGSVVTYRPHSGPIGHIVVPT-SDPCSVYTCSYDSTLRL 1727
Query: 424 SGGEEGMVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGSGDECVSASSDGSCILWDLHTF 483
E G+ + + D P + + + GD + D T+
Sbjct: 1726 GNFERGVFDLIYSVNXEENNSFRNFDFLSPSSLLLAQFMGDVSII----------DTRTY 1577
Query: 484 KRR---TSLFANTFFKSVVYHPDESQL-VTAGTDRKVTYWD 520
R+ T +T+ +SV HP VTAG+D K + WD
Sbjct: 1576 GRKAEQTYTVCDTYLRSVSVHPTNPHFFVTAGSDMKXSVWD 1454
>01805
Length = 2124
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 2/119 (1%)
Frame = -1
Query: 468 SASSDGSCILWDLHTFKRRTSLFANTF-FKSVVYHPDESQLVTAGTDRKVTYWDAYDGNA 526
SAS+D + LWDL K + ++ + +HP E Q + G ++D N
Sbjct: 522 SASADTTVALWDLSEGKMAMNFTQHSREVQCCNWHPQEEQTLLTG---------SFD-NT 373
Query: 527 IRIIDGSDLDEVN-ALAVDRDGEALVSGGGDKLVKLWGYDEGHCYFVGVAHSGAITAVG 584
++++D + + + V+ + E V + L L D+G Y + H + +VG
Sbjct: 372 VKVVDCRSAETCHKSWTVEGEVEKAVWNHHNPLQLLACTDKGMVYCFDIRHEKPVFSVG 196
>21921
Length = 1341
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = -1
Query: 538 VNALAVDRDGEALVSGGGDKLVKLWGYDEGHCYFVGVAHSGAITAVGVTPDKQRIVSVGT 597
V ++ D G+ LVSG D ++ W G C + G +T+V P+ V T
Sbjct: 474 VRSICPDPTGQWLVSGSDDGTIRFWEVSSGRC-MKTLQVGGCVTSVAWNPNPSLCVVAAT 298
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = -1
Query: 448 KDHKGPVNCIRIKGSGDECVSASSDGSCILWDLHTFKRRTSLFANTFFKSVVYHPDESQL 507
K H G V I +G VS S DG+ W++ + + +L SV ++P+ S
Sbjct: 492 KGHTGIVRSICPDPTGQWLVSGSDDGTIRFWEVSSGRCMKTLQVGGCVTSVAWNPNPSLC 313
Query: 508 VTAGT 512
V A T
Sbjct: 312 VVAAT 298
>15337
Length = 860
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -1
Query: 384 SDGKIRAFGPQSGKIIFTINDAHQKAVTAIASTADSSRILSGGEEGMVRVW 434
DG +R F S ++I T+ ++ + + + D I++GGE+ +V VW
Sbjct: 269 QDGHLRVFNYNSMELIGTMK-SYFGGLLCVCWSPDGKYIVTGGEDDLVTVW 120
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 546 DGEALVSGGGDKLVKLWGYDEGHCYFVGVAHSGAITAVG 584
DG+ +V+GG D LV +W + E G H + V
Sbjct: 170 DGKYIVTGGEDDLVTVWSFHEKRVVCRGHGHKSWVNVVA 54
>13890
Length = 630
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 49/123 (39%), Gaps = 10/123 (8%)
Frame = +1
Query: 500 YHPDESQLVTAGTDRKVTYWDAYDGNA-IRIIDGSD-LDEVNALAVDRDGEALVSGG--- 554
+HP LV GT + WD +R++ + L +V + DG+ + S G
Sbjct: 4 FHPVTPHLVATGTTDCIQVWDVRHPEVPVRVLTHKEQLGQVQDVMFSHDGQEVFSCGDVV 183
Query: 555 ----GDKLVKLWGYDEGHCYFVGVAHSG-AITAVGVTPDKQRIVSVGTEGGIFIWDYQRP 609
D+ + W + G + +T + + P + + ++ G I ++ QRP
Sbjct: 184 SRESSDRSIMAWDFRTGVILSNQIFQERYTVTRLMLHPYQSQFLAQTQAGYIAVFSTQRP 363
Query: 610 QTL 612
+
Sbjct: 364 YKM 372
>10264
Length = 416
Score = 30.4 bits (67), Expect = 2.2, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 575 AHSGAITAVGVTPDKQ-RIVSVGTEGGIFIWDYQRPQTLA 613
HS +T + +P R+VSVG + F+WD Q+ LA
Sbjct: 251 GHSQRVTDMSWSPHHDARLVSVGYDAEAFVWDVQKGTALA 132
>30295
Length = 593
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +2
Query: 436 IGRTSQTLEASMKDHKGPVNCIRIKGSGDECVSASSDGSCILWDLHTFKRRTSL-FANTF 494
+GR +++ H + + VSAS DG I+WD +T + ++ +++
Sbjct: 200 VGRIQMRTRRTLRXHLAKIYAMHWATDSRNLVSASQDGKLIVWDGYTTNKVHAIPLRSSW 379
Query: 495 FKSVVYHPDESQLVTAGTD 513
+ Y P + G D
Sbjct: 380 VMTCAYAPSGGYVACGGLD 436
>27806
Length = 419
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/78 (17%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = -1
Query: 541 LAVDRDGEALV-SGGGDKLVKLWGYDEGHCYFVGVAHSGAITAVGVTPDKQRIVSVGTEG 599
++V R G ++ + D +++ + G C H G++ AV P + +++ +
Sbjct: 410 VSVSRPGHPIIGTASADHTARIYSIETGACVLTYGGHQGSVNAVRFHPGQDLVLTASGDH 231
Query: 600 GIFIW--DYQRPQTLADI 615
+W + +P ++D+
Sbjct: 230 TAHVWRAQFSQPSLMSDL 177
>17807
Length = 484
Score = 29.6 bits (65), Expect = 3.3, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 27/72 (37%)
Frame = -2
Query: 418 DSSRILSGGEEGMVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGSGDECVSASSDGSCIL 477
D LSG +G +R+W I T+ + + +G V + DG CI
Sbjct: 426 DDRYFLSGSLDGKIRLWNIPDKKVTMWNELSGSSNLITTASFCHNGRLAVVGTYDGRCIF 247
Query: 478 WDLHTFKRRTSL 489
+ K T L
Sbjct: 246 YTTDQLKYYTML 211
>31474
Length = 403
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = -3
Query: 351 LTTCRELLRIAVPNLECFCIAFTTDGSAILSGWSDGKIRAFGPQSGKIIF--TINDAHQK 408
+ T E+ ++ + +C+A+ G+ + S SD I+ +G + + T+ DAH +
Sbjct: 344 MATLEEVCCLSAHDEHAWCVAWNPTGTLLASCGSDKIIKIWGKEGDNWVCKSTLTDAHTR 165
Query: 409 AVTAIASTADSSRILSGGEEGMVRVW-RIGRTSQTLEASMKDHKGPVNCI 457
V ++ + + + S + VW R G + + A+++ H+ V +
Sbjct: 164 TVRSLGWSPCGNYLSSASFDATTAVWSRKGGEFECI-ATLEGHENEVKAV 18
>11915
Length = 737
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 71 LASGQITYMGFTADIIIWDLESKQLIHRMALHKVKVQALDFSCDERFLASLGGQDDNALV 130
LA+G ++ I +W+ E+ +L+ M HK V L F+ D L + D +
Sbjct: 451 LATGHVS-----GRIKLWNCETGKLLIEMMDHKATVHDLHFAADNS-LCLMSASHDGTVK 612
Query: 131 LWD 133
LW+
Sbjct: 613 LWE 621
>00825
Length = 1821
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
Frame = -2
Query: 424 SGGEEGMVRVWRIGRTSQTLEASMKDHKGPVNCIRIKGSGDECVSASSDGSCILWDLH-- 481
SG +G + W + + Q + ++ H G V+ + SG S SD + W L
Sbjct: 1820 SGACDGELICWNLPK--QQMACRVQAHDGIVHGMAAHSSGQYFFSCGSDKTIKQWSLDPE 1647
Query: 482 ---TFKRRTSLFANTFFKSVVYHPDESQLVTAGTDRKVTYWDAYDGNAIR 528
+ +L A + S+ +H + VT+G+ +V WD +R
Sbjct: 1646 GTIAPEPVNTLLAKCIYTSLDHHWKDDIFVTSGS--RVDVWDEKRSEPMR 1503
>13486
Length = 1509
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -1
Query: 91 ESKQLIHRMALHKVKVQALDFSCDERFLASLGGQDDNALVLW 132
ESK ++++ H V + F+CDE LAS Q +++W
Sbjct: 936 ESKSCVNKLLGHSAPVLDVCFNCDESLLASCDAQ--GMVIIW 817
>10742
Length = 1401
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -1
Query: 307 PATSRLKEELVQTAHNDKINGMAFPNEYSEVFATCGTGFIRL 348
P SR + E+++ ++ FPN YS +F T GT FI++
Sbjct: 753 PVPSRTEREILEFVNHYMTFTQIFPNYYSCLFPTVGT-FIKV 631
>15972
Length = 1069
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Frame = +3
Query: 444 EASMKDHKGPVNCIRIKGSGDECVSASSDGSCILWDLHTFKRRTSLFAN--TFFKSVVYH 501
E + HKGPV + + SG ++ S D + LW+ R + +N +SV +
Sbjct: 216 ERTFSGHKGPVRHLAVHPSGKLTLTVSQDRTLRLWN--NMNGRIAFISNMKEAAESVRWA 389
Query: 502 PDESQLVTAGTDRKVTYWDAYDGNA---IRIIDGSDLDEVNALAVDRDGEALVSGGGDKL 558
P V A ++ D Y + +R ID S VN++ D LV GG K+
Sbjct: 390 PGGLYYVVAFR----SHLDVYSVESKGLLRSIDTSQT--VNSVGFVTDT-VLVYGGEGKV 548
Query: 559 VKLWGYDEGHCYFVGVAHSGAITAVGVTPDKQRIVSV 595
+K + +F + + + V + R ++V
Sbjct: 549 MKNGEREHASLFFTDILNGDCVLQVQTECSRIRELAV 659
>17266
Length = 480
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Frame = -1
Query: 25 PDGRTIIY-PLGSTIVLRDRADPRSQEFLQGHSDKVSCLALSRSGRYLASGQITYMGFTA 83
PD RT + ++ L D D ++ GH ++ + +G A+G A
Sbjct: 429 PDMRTFVSGACDASAKLWDVRDGMCKQTFSGHESDINAITYFPNGHAFATGSDD-----A 265
Query: 84 DIIIWDLESKQLIHRMALHKV--KVQALDFSCDERFLASLGGQDDNALVLWDV 134
++D+ + Q I + + + ++ FS R L LGG DD +WDV
Sbjct: 264 TCRLFDIRADQEIGMYSHDNIICGITSVAFSKSGRLL--LGGYDDFNCNIWDV 112
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 28/72 (38%)
Frame = -1
Query: 541 LAVDRDGEALVSGGGDKLVKLWGYDEGHCYFVGVAHSGAITAVGVTPDKQRIVSVGTEGG 600
L++ D VSG D KLW +G C H I A+ P+ + +
Sbjct: 441 LSLAPDMRTFVSGACDASAKLWDVRDGMCKQTFSGHESDINAITYFPNGHAFATGSDDAT 262
Query: 601 IFIWDYQRPQTL 612
++D + Q +
Sbjct: 261 CRLFDIRADQEI 226
>03044
Length = 1952
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 576 HSGAITAVGVTPDKQRIVSVGTEGGIFIWDYQ 607
H +T + P RIV+ G + ++W YQ
Sbjct: 1657 HGQRVTGIDWAPKSNRIVTCGADRNAYVWTYQ 1562
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|159478106|ref|XP_001697145.1| deflagellation
inducible protein [Chlamydomonas reinhardtii]
(111 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
33446 125 4e-30
12739 25 9.5
>33446
Length = 440
Score = 125 bits (314), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 89/106 (83%)
Frame = -1
Query: 1 MSAQGQALQNHNNELVKCIEDLREKREEIIKQLREDDAEKAKITQELQILTKRLAQVNES 60
MS QG ALQ++NNELVKCIEDL KR+E+ + + +++ EK K+ ++++LT+RL++VNES
Sbjct: 353 MSQQGAALQSYNNELVKCIEDLCSKRDELHRSIVQEEEEKQKLQNDIRVLTERLSKVNES 174
Query: 61 IARKTETKNEYDKVISETEAAYLKILESSQTLLTVLKREAVNIAKK 106
+A+K ++NE+DK I+ETEAAY+KILESSQTLL VLKRE+ ++ +K
Sbjct: 173 LAKKMASRNEFDKTIAETEAAYMKILESSQTLLNVLKRESQSLKEK 36
>12739
Length = 632
Score = 24.6 bits (52), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 15 LVKCIEDLREKREEII---KQLREDDAEKAKITQELQILTKRLAQVNESIARKTE 66
LVK EDLR+ RE + Q+ D E A LA+ E + RKTE
Sbjct: 186 LVKVQEDLRQLRERFVSKDGQISISDFENA------------LAKTEEGLQRKTE 314
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158281595|gb|EDP07349.1| centriole proteome protein
[Chlamydomonas reinhardtii]
(393 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30256 123 1e-28
00561 120 8e-28
19949 105 4e-23
02147 99 3e-21
17598 92 3e-19
12960 87 1e-17
02090 87 1e-17
13335 86 3e-17
01327 84 1e-16
12806 83 2e-16
27465 76 2e-14
12574 76 3e-14
03156 75 3e-14
17602 73 2e-13
17266 72 3e-13
19498 70 1e-12
16199 53 2e-12
00825 69 3e-12
02960 68 5e-12
03395 67 9e-12
11493 66 3e-11
03387 63 2e-10
13278 61 6e-10
15118 61 9e-10
10162 60 1e-09
01768 57 2e-08
31474 55 3e-08
26939 55 5e-08
26107 54 1e-07
35607 54 1e-07
21105 53 2e-07
01805 52 3e-07
15337 52 3e-07
31864 52 4e-07
18981 51 6e-07
14555 43 9e-07
25880 51 1e-06
19863 50 1e-06
37180 49 2e-06
27270 49 4e-06
15972 49 4e-06
01249 49 4e-06
04088 47 1e-05
14500 41 1e-05
15780 47 1e-05
01598 47 1e-05
02948 47 2e-05
31384 46 2e-05
30176 45 3e-05
16105 45 4e-05
20662 45 5e-05
21921 44 8e-05
30295 44 8e-05
19140 44 9e-05
29912 43 2e-04
05393 43 2e-04
01462 42 3e-04
17298 42 4e-04
27681 37 4e-04
39204 42 5e-04
27806 40 0.002
21763 40 0.002
20271 40 0.002
12841 40 0.002
27059 39 0.003
21960 39 0.003
33180 37 0.004
38177 38 0.006
15251 38 0.007
15745 38 0.007
12140 38 0.009
24785 37 0.013
13890 37 0.014
17807 37 0.018
04524 37 0.019
03734 36 0.034
11915 35 0.040
08872 35 0.055
10264 35 0.056
05642 35 0.062
06576 35 0.071
34005 35 0.075
07665 34 0.100
35695 34 0.13
03044 33 0.16
31054 33 0.22
30108 33 0.23
13509 33 0.25
25400 33 0.29
30679 33 0.29
27525 32 0.33
06799 32 0.33
05303 32 0.36
22113 32 0.39
07542 32 0.40
36111 32 0.47
30297 31 0.73
07151 31 0.79
13486 31 0.81
06563 30 1.6
08679 30 1.7
01557 30 1.9
21996 29 3.3
37142 28 4.7
04358 28 4.8
27475 28 5.6
34511 28 7.0
28289 28 8.8
20615 28 8.9
>30256
Length = 961
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 3/255 (1%)
Frame = +3
Query: 50 FAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGR 109
GH GV+S + + SGS DR++++W + L H+ TVR ++ S G+
Sbjct: 30 LIGHTGGVWSSQMTG--NTVISGSTDRSLKVWNADTGVCTHTLYGHSSTVRCLSLS--GK 197
Query: 110 MLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNS 169
+ + S D T+++W + + L GH VRCV DG+ VSG D TVR+WD ++
Sbjct: 198 KVVSGSRDATLRVWDIESGHCLNVLLGHMAAVRCVQY--DGKRVVSGAXDYTVRVWDPDT 371
Query: 170 KKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLS 229
+ T + T ++ F DG + SGS D SI++WD+R L+ H + L
Sbjct: 372 ASCLHTLQGHTNRVYSLQF--DGVYVVSGSLDTSIRVWDVRCGKLVHTLMGHQSLTSGLE 545
Query: 230 FHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHG---HEGATNGTAFSPAGDYFASCGADE 286
N L+S + D+T+KVWD+ G+ L TL G H A F+ + +C D
Sbjct: 546 LKD--NLLVSGNADSTVKVWDVHTGKCLQTLLGPNKHRSAVTCLQFNKK--FVVTCSDDG 713
Query: 287 QVMVWKTNFDRFLED 301
V +W N F+ +
Sbjct: 714 TVKLWDLNTGDFIRN 758
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 110/213 (51%)
Frame = +3
Query: 92 LKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGR 151
L HTG V + G + + S D+++K+W+ T TL GH + VRC+ +S G+
Sbjct: 30 LIGHTGGVWSSQMT--GNTVISGSTDRSLKVWNADTGVCTHTLYGHSSTVRCLSLS--GK 197
Query: 152 LAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRS 211
VSG D T+R+WD+ S + V + DG + SG+ D ++++WD +
Sbjct: 198 KVVSGSRDATLRVWDIESGHCLNVLLGHMAAVRCVQY--DGKRVVSGAXDYTVRVWDPDT 371
Query: 212 NVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTA 271
L + HT V L F G +++S SLDT+++VWD+R G+L++TL GH+ T+G
Sbjct: 372 ASCLHTLQGHTNRVYSLQFD--GVYVVSGSLDTSIRVWDVRCGKLVHTLMGHQSLTSGLE 545
Query: 272 FSPAGDYFASCGADEQVMVWKTNFDRFLEDYTG 304
+ S AD V VW + + L+ G
Sbjct: 546 LKD--NLLVSGNADSTVKVWDVHTGKCLQTLLG 638
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 123/258 (47%), Gaps = 3/258 (1%)
Frame = +3
Query: 6 RSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPV 65
++ GH V S N +++GS D + VWN + GH + V ++ S
Sbjct: 24 KNLIGHTGGVWSSQMTGN--TVISGSTDRSLKVWNADTGVCTHTLYGHSSTVRCLSLSG- 194
Query: 66 HALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSV 125
+ SGS+D T+R+W VL H VR V + DG+ + + + D TV++W
Sbjct: 195 -KKVVSGSRDATLRVWDIESGHCLNVLLGHMAAVRCVQY--DGKRVVSGAXDYTVRVWDP 365
Query: 126 ATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNT 185
T TL GH N R + DG VSG D ++R+WD+ K+V T LT+
Sbjct: 366 DTASCLHTLQGHTN--RVYSLQFDGVYVVSGSLDTSIRVWDVRCGKLVHTLMGHQSLTSG 539
Query: 186 VSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHY---RAHTGPVTHLSFHPTGNFLLSSSL 242
+ + + SG+ D+++K+WD+ + LQ H VT L F+ F+++ S
Sbjct: 540 LELKDN--LLVSGNADSTVKVWDVHTGKCLQTLLGPNKHRSAVTCLQFNK--KFVVTCSD 707
Query: 243 DTTLKVWDLREGQLLYTL 260
D T+K+WDL G + L
Sbjct: 708 DGTVKLWDLNTGDFIRNL 761
>00561
Length = 1003
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 109/210 (51%), Gaps = 5/210 (2%)
Frame = -3
Query: 5 ERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSP 64
++ GH ++ V + + ++GS D + +W+ RF GH V SVAFS
Sbjct: 887 QKRLYGHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSA 708
Query: 65 VHALIASGSKDRTVRLWQPTVEGKSTVLK-AHTGTVRGVTFSSD--GRMLATCSDDKTVK 121
+ I SGS+D+T++LW E K T+ + HT V V FS + ++ +C D+TVK
Sbjct: 707 DNRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVK 528
Query: 122 IWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTG 181
+W++A K GH ++ V +SPDG L SGG D +WDLN K + T E
Sbjct: 527 VWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLEH-ND 351
Query: 182 LTNTVSFHPD--GTCIASGSTDNSIKLWDL 209
+ N + F P+ C+A G SIK+WDL
Sbjct: 350 IINALCFSPNRYWLCVAYGP---SIKIWDL 270
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 99/202 (49%), Gaps = 9/202 (4%)
Frame = -3
Query: 102 VTFSSDGRMLATCSDDKTVKIWSVATQK---FAFT---LTGHQNWVRCVHISPDGRLAVS 155
T D + + S DKT+ +W + + + + L GH +++ V +S DG A+S
Sbjct: 992 ATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYALS 813
Query: 156 GGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWD-LRSNVL 214
G D+T+R+WDL + K R FE T +V+F D I SGS D +IKLW+ L
Sbjct: 812 GSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKF 633
Query: 215 LQHYRAHTGPVTHLSFHP--TGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAF 272
HT V+ + F P + ++S D T+KVW+L +L HGH G N
Sbjct: 632 TIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTV 453
Query: 273 SPAGDYFASCGADEQVMVWKTN 294
SP G S G D + ++W N
Sbjct: 452 SPDGSLCTSGGKDSKALLWDLN 387
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 109/232 (46%), Gaps = 9/232 (3%)
Frame = -3
Query: 69 IASGSKDRTVRLWQPTVEGKSTV------LKAHTGTVRGVTFSSDGRMLATCSDDKTVKI 122
I S S+D+T+ +W+ T + + L H+ + V SSDG + S D+T+++
Sbjct: 965 IISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYALSGSWDQTLRL 786
Query: 123 WSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDP-TG 181
W +A K GH V V S D R VSG D+T+++W+ ++ ED T
Sbjct: 785 WDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTD 606
Query: 182 LTNTVSFHPD--GTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLS 239
+ V F P+ I S D ++K+W+L + L ++ H G + ++ P G+ S
Sbjct: 605 WVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTS 426
Query: 240 SSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVW 291
D+ +WDL +G+ LYTL H N FSP Y+ + +W
Sbjct: 425 GGKDSKALLWDLNDGKNLYTLE-HNDIINALCFSP-NRYWLCVAYGPSIKIW 276
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = -2
Query: 64 PVHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIW 123
P+H + SG + L +P V ++ KA + +S+DG+ L D T+++W
Sbjct: 294 PIHQDLGSGMQKAVEEL-RPEVVSPTS--KAEQPQCLSLAWSTDGQTLFAGYSDNTIRVW 124
Query: 124 SVA 126
V+
Sbjct: 123 QVS 115
>19949
Length = 903
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 77/145 (53%)
Frame = +2
Query: 57 VYSVAFSPVHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSD 116
V S+ F P A ASGS D V+LW +G K HTG V + FS DGR +A+ S+
Sbjct: 2 VKSLDFHPYGAYTASGSMDCNVKLWDIRRKGCIYTYKGHTGCVCCLRFSPDGRWIASASE 181
Query: 117 DKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTF 176
D VK+W + K L H++ V + P L SG DRTV+ WDL + +++ T
Sbjct: 182 DGLVKLWDLTAGKLLTDLKLHRDAVNTIEFHPHEFLLASGSADRTVKFWDLETFQLISTT 361
Query: 177 EDPTGLTNTVSFHPDGTCIASGSTD 201
E ++ FHPDG C+ SGS D
Sbjct: 362 EPEANSIRSILFHPDGVCLYSGSKD 436
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 81/162 (50%)
Frame = +2
Query: 99 VRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGD 158
V+ + F G A+ S D VK+W + + +T GH V C+ SPDGR S +
Sbjct: 2 VKSLDFHPYGAYTASGSMDCNVKLWDIRRKGCIYTYKGHTGCVCCLRFSPDGRWIASASE 181
Query: 159 DRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHY 218
D V++WDL + K++ + NT+ FHP +ASGS D ++K WDL + L+
Sbjct: 182 DGLVKLWDLTAGKLLTDLKLHRDAVNTIEFHPHEFLLASGSADRTVKFWDLETFQLISTT 361
Query: 219 RAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTL 260
+ + FHP G L S S D TLKV+ +L T+
Sbjct: 362 EPEANSIRSILFHPDGVCLYSGSKD-TLKVYHWEPLELYDTV 484
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 77/168 (45%), Gaps = 1/168 (0%)
Frame = +2
Query: 141 VRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGST 200
V+ + P G SG D V++WD+ K + T++ TG + F PDG IAS S
Sbjct: 2 VKSLDFHPYGAYTASGSMDCNVKLWDIRRKGCIYTYKGHTGCVCCLRFSPDGRWIASASE 181
Query: 201 DNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTL 260
D +KLWDL + LL + H V + FHP L S S D T+K WDL QL+ T
Sbjct: 182 DGLVKLWDLTAGKLLTDLKLHRDAVNTIEFHPHEFLLASGSADRTVKFWDLETFQLISTT 361
Query: 261 HGHEGATNGTAFSPAGDYFASCGADE-QVMVWKTNFDRFLEDYTGVSV 307
+ F P G S D +V W+ LE Y VSV
Sbjct: 362 EPEANSIRSILFHPDGVCLYSGSKDTLKVYHWEP-----LELYDTVSV 490
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%)
Frame = +2
Query: 15 VTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHALIASGSK 74
V S+ F+ +GS+D V +W+ + + + + GH V + FSP IAS S+
Sbjct: 2 VKSLDFHPYGAYTASGSMDCNVKLWDIRRKGCIYTYKGHTGCVCCLRFSPDGRWIASASE 181
Query: 75 DRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTL 134
D V+LW T T LK H V + F +LA+ S D+TVK W + T + T
Sbjct: 182 DGLVKLWDLTAGKLLTDLKLHRDAVNTIEFHPHEFLLASGSADRTVKFWDLETFQLISTT 361
Query: 135 TGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTG 181
N +R + PDG SG D T++++ ++ T P G
Sbjct: 362 EPEANSIRSILFHPDGVCLYSGSKD-TLKVYHWEPLELYDTVSVPWG 499
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%)
Frame = +2
Query: 7 SFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVH 66
+++GH V + F+ + + + + S D V +W+ H+ V ++ F P
Sbjct: 104 TYKGHTGCVCCLRFSPDGRWIASASEDGLVKLWDLTAGKLLTDLKLHRDAVNTIEFHPHE 283
Query: 67 ALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIW 123
L+ASGS DRTV+ W + + ++R + F DG L + S D T+K++
Sbjct: 284 FLLASGSADRTVKFWDLETFQLISTTEPEANSIRSILFHPDGVCLYSGSKD-TLKVY 451
>02147
Length = 1547
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 3/251 (1%)
Frame = +2
Query: 50 FAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGR 109
F GHK V+ + A+G+ D + ++W +G+ +H V+ V FS DG
Sbjct: 161 FEGHKGAVWGATLNREATRAATGAADFSAKIWDAE-KGEELQTFSHKHIVKSVDFSHDGT 337
Query: 110 MLATCSDDKTVKIWS-VATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLN 168
L T S++K +K++ V T + GH + ++ DG+ +S DD+TVR+W L
Sbjct: 338 ALLTGSNEKLLKVFDLVNTDAEPKSFAGHTSNIKGALFLSDGKRIISASDDKTVRLWSLE 517
Query: 169 SKKVVR--TFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVT 226
+ + V+ TF+ P +++ PD I + N I + + ++ + A P++
Sbjct: 518 TCQEVQQLTFDTPP---TSLTLSPDKNTIIVTHSQN-IAFYQADTLREMKKFEAE-APIS 682
Query: 227 HLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADE 286
S H + F ++ D + +D G+ + + GH G + FSP G+ +AS D
Sbjct: 683 SASLHQSERFFVAGGEDFKMYKFDYETGKEIESFKGHFGPVHCVRFSPDGELYASGSEDG 862
Query: 287 QVMVWKTNFDR 297
+ +W+T R
Sbjct: 863 TLRLWQTTIGR 895
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 42/243 (17%)
Frame = +2
Query: 7 SFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFK--PQLRAFRFAGHKAGVYSVAFSP 64
+F GHK AV N + TG+ D +W+ + +L+ F HK V SV FS
Sbjct: 158 TFEGHKGAVWGATLNREATRAATGAADFSAKIWDAEKGEELQTF---SHKHIVKSVDFSH 328
Query: 65 VHALIASGSKDRTVRLWQ-PTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIW 123
+ +GS ++ ++++ + + HT ++G F SDG+ + + SDDKTV++W
Sbjct: 329 DGTALLTGSNEKLLKVFDLVNTDAEPKSFAGHTSNIKGALFLSDGKRIISASDDKTVRLW 508
Query: 124 SVAT----QKFAF-------TLTGHQNWVRCVH--------------------------- 145
S+ T Q+ F TL+ +N + H
Sbjct: 509 SLETCQEVQQLTFDTPPTSLTLSPDKNTIIVTHSQNIAFYQADTLREMKKFEAEAPISSA 688
Query: 146 -ISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSI 204
+ R V+GG+D + +D + K + +F+ G + V F PDG ASGS D ++
Sbjct: 689 SLHQSERFFVAGGEDFKMYKFDYETGKEIESFKGHFGPVHCVRFSPDGELYASGSEDGTL 868
Query: 205 KLW 207
+LW
Sbjct: 869 RLW 877
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 9/232 (3%)
Frame = +2
Query: 6 RSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFK--PQLRAFRFAGHKAGVYSVAFS 63
+SF GH + F + K++++ S D V +W+ + +++ F S+ S
Sbjct: 407 KSFAGHTSNIKGALFLSDGKRIISASDDKTVRLWSLETCQEVQQLTF---DTPPTSLTLS 577
Query: 64 P-VHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKI 122
P + +I + S++ + +Q + +A + + R +D +
Sbjct: 578 PDKNTIIVTHSQN--IAFYQADTLREMKKFEAE-APISSASLHQSERFFVAGGEDFKMYK 748
Query: 123 WSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGL 182
+ T K + GH V CV SPDG L SG +D T+R+W + RT+ GL
Sbjct: 749 FDYETGKEIESFKGHFGPVHCVRFSPDGELYASGSEDGTLRLWQTT---IGRTY----GL 907
Query: 183 TNTVSFHPDGTCIASGSTDNSIKL-WDLRS--NVLLQHYRAHTG---PVTHL 228
V PD + + D + W RS +V H R H+G P+T L
Sbjct: 908 WKCVI--PDEADAQNSTPDVKAES*WTGRSDRDVXTAHTRLHSGLACPITPL 1057
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Frame = +2
Query: 173 VRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHP 232
+ TFE G + + + T A+G+ D S K+WD LQ + +H V + F
Sbjct: 152 IGTFEGHKGAVWGATLNREATRAATGAADFSAKIWDAEKGEELQTF-SHKHIVKSVDFSH 328
Query: 233 TGNFLLSSSLDTTLKVWDL-REGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVW 291
G LL+ S + LKV+DL + GH G F G S D+ V +W
Sbjct: 329 DGTALLTGSNEKLLKVFDLVNTDAEPKSFAGHTSNIKGALFLSDGKRIISASDDKTVRLW 508
>17598
Length = 875
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 3/228 (1%)
Frame = +1
Query: 5 ERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSP 64
R+ +GH V+ V + + + +++ S D + +W+ K RF H +VAFSP
Sbjct: 100 RRTLQGHSHFVSDVSLSADSRYVLSSSWDATLRLWDIKKGNTTRRFISHTRDALAVAFSP 279
Query: 65 VHALIASGSKDRTVRLWQPTVEGKSTV-LKAHTGTVRGVTFSSDGR--MLATCSDDKTVK 121
+ IASG +D+ +++W E K TV +H V V F D + ++ + S DKT+K
Sbjct: 280 DNRQIASGGRDKALKIWNTVGECKFTVDANSHQDWVTCVKFHQDAKSPLVVSASMDKTIK 459
Query: 122 IWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTG 181
+W T T GH+ + + ++ SG D V W++ + + D
Sbjct: 460 VWDNQTMTLKHTFVGHKTQINAIDLALKTYYLASGSKDGIVMTWNIQNGTFLGKI-DCDC 636
Query: 182 LTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLS 229
N V F P+ + G+++ I++WDL + ++ RA H S
Sbjct: 637 EVNAVKFSPNKYWLFVGTSE-GIQIWDLPNQKKIKDIRASPIDAQHKS 777
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 79/170 (46%), Gaps = 3/170 (1%)
Frame = +1
Query: 133 TLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDG 192
TL GH ++V V +S D R +S D T+R+WD+ R F T V+F PD
Sbjct: 106 TLQGHSHFVSDVSLSADSRYVLSSSWDATLRLWDIKKGNTTRRFISHTRDALAVAFSPDN 285
Query: 193 TCIASGSTDNSIKLWDLRSNVLLQ-HYRAHTGPVTHLSFHPTGN--FLLSSSLDTTLKVW 249
IASG D ++K+W+ +H VT + FH ++S+S+D T+KVW
Sbjct: 286 RQIASGGRDKALKIWNTVGECKFTVDANSHQDWVTCVKFHQDAKSPLVVSASMDKTIKVW 465
Query: 250 DLREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWKTNFDRFL 299
D + L +T GH+ N + Y AS D VM W FL
Sbjct: 466 DNQTMTLKHTFVGHKTQINAIDLALKTYYLASGSKDGIVMTWNIQNGTFL 615
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 103/259 (39%), Gaps = 13/259 (5%)
Frame = +1
Query: 68 LIASGSKDRTVRLWQ----------PTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDD 117
+ G +D+ + +W T G L+ H+ V V+ S+D R + + S D
Sbjct: 7 FLIXGGRDKLLIVWDLVPRKDGDEDETWGGPRRTLQGHSHFVSDVSLSADSRYVLSSSWD 186
Query: 118 KTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWD-LNSKKVVRTF 176
T+++W + H V SPD R SGG D+ ++IW+ + K
Sbjct: 187 ATLRLWDIKKGNTTRRFISHTRDALAVAFSPDNRQIASGGRDKALKIWNTVGECKFTVDA 366
Query: 177 EDPTGLTNTVSFHPDGTC--IASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTG 234
V FH D + S S D +IK+WD ++ L + H + +
Sbjct: 367 NSHQDWVTCVKFHQDAKSPLVVSASMDKTIKVWDNQTMTLKHTFVGHKTQINAIDLALKT 546
Query: 235 NFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWKTN 294
+L S S D + W+++ G L + + N FSP Y+ G E + +W
Sbjct: 547 YYLASGSKDGIVMTWNIQNGTFLGKIDC-DCEVNAVKFSP-NKYWLFVGTSEGIQIWDLP 720
Query: 295 FDRFLEDYTGVSVAKQTRT 313
+ ++D + Q ++
Sbjct: 721 NQKKIKDIRASPIDAQHKS 777
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +1
Query: 3 TLERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGH---KAGVYS 59
TL+ +F GHK + ++ L +GS D VM WN ++ F G V +
Sbjct: 481 TLKHTFVGHKTQINAIDLALKTYYLASGSKDGIVMTWN----IQNGTFLGKIDCDCEVNA 648
Query: 60 VAFSPVHALIASGSKDRTVRLWQPTVEGKSTVLKA 94
V FSP + G+ + +++W + K ++A
Sbjct: 649 VKFSPNKYWLFVGTSE-GIQIWDLPNQKKIKDIRA 750
>12960
Length = 550
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 69/135 (51%)
Frame = +2
Query: 88 KSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHIS 147
K + VR V FS D R TC DK+VK+W+ + F T GH + V S
Sbjct: 149 KEVTINCKQQAVRAVRFSVDSRYCMTCGSDKSVKLWNPHRELFLKTYIGHGHEVLDAQGS 328
Query: 148 PDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLW 207
D SGG D+TV ++D+ S + +R + D G N V F+ + T I SGS DN+++ W
Sbjct: 329 GDNSQICSGGIDKTVVLFDVASGQALRKYRDHAGTVNCVKFNEESTVILSGSLDNTVRAW 508
Query: 208 DLRSNVLLQHYRAHT 222
D RS R+HT
Sbjct: 509 DTRS-------RSHT 532
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%)
Frame = +2
Query: 133 TLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDG 192
T+ Q VR V S D R ++ G D++V++W+ + + ++T+ D
Sbjct: 158 TINCKQQAVRAVRFSVDSRYCMTCGSDKSVKLWNPHRELFLKTYIGHGHEVLDAQGSGDN 337
Query: 193 TCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLR 252
+ I SG D ++ L+D+ S L+ YR H G V + F+ +LS SLD T++ WD R
Sbjct: 338 SQICSGGIDKTVVLFDVASGQALRKYRDHAGTVNCVKFNEESTVILSGSLDNTVRAWDTR 517
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 58/142 (40%)
Frame = +2
Query: 29 TGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQPTVEGK 88
T S+ N M + P + + V +V FS + D++V+LW P E
Sbjct: 101 THSVQNTNMKFEL-PDRKEVTINCKQQAVRAVRFSVDSRYCMTCGSDKSVKLWNPHRELF 277
Query: 89 STVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISP 148
H V S D + + DKTV ++ VA+ + H V CV +
Sbjct: 278 LKTYIGHGHEVLDAQGSGDNSQICSGGIDKTVVLFDVASGQALRKYRDHAGTVNCVKFNE 457
Query: 149 DGRLAVSGGDDRTVRIWDLNSK 170
+ + +SG D TVR WD S+
Sbjct: 458 ESTVILSGSLDNTVRAWDTRSR 523
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 41/100 (41%)
Frame = +2
Query: 194 CIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLRE 253
C+ GS D S+KLW+ + L+ Y H V + + S +D T+ ++D+
Sbjct: 218 CMTCGS-DKSVKLWNPHRELFLKTYIGHGHEVLDAQGSGDNSQICSGGIDKTVVLFDVAS 394
Query: 254 GQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWKT 293
GQ L H G N F+ S D V W T
Sbjct: 395 GQALRKYRDHAGTVNCVKFNEESTVILSGSLDNTVRAWDT 514
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%)
Frame = +2
Query: 5 ERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSP 64
E + + AV +V F+ + + +T D V +WN +L + GH V S
Sbjct: 152 EVTINCKQQAVRAVRFSVDSRYCMTCGSDKSVKLWNPHRELFLKTYIGHGHEVLDAQGSG 331
Query: 65 VHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIW 123
++ I SG D+TV L+ + H GTV V F+ + ++ + S D TV+ W
Sbjct: 332 DNSQICSGGIDKTVVLFDVASGQALRKYRDHAGTVNCVKFNEESTVILSGSLDNTVRAW 508
>02090
Length = 1841
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 2/179 (1%)
Frame = -3
Query: 119 TVKIWSVATQ--KFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTF 176
T+ IW +AT + LT + ISPDG++ S D + +WDL+++ +VR F
Sbjct: 1689 TLSIWDLATPTPRIKAELTSSAPACYALAISPDGKVCFSCCSDGNIAVWDLHNQTLVRQF 1510
Query: 177 EDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNF 236
+ T + + PDGT + +G DN+++ WDLR LQ + + + L + PTG +
Sbjct: 1509 QGHTDGASCIDISPDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FSSQIFSLGYCPTGEW 1333
Query: 237 LLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWKTNF 295
L + ++V + Y LH HE F+ G +F S G D + W+T +
Sbjct: 1332 LAVGMESSNVEVLHHSKPD-KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 1159
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 3/185 (1%)
Frame = -3
Query: 77 TVRLWQ---PTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFT 133
T+ +W PT K+ L + + S DG++ +C D + +W + Q
Sbjct: 1689 TLSIWDLATPTPRIKAE-LTSSAPACYALAISPDGKVCFSCCSDGNIAVWDLHNQTLVRQ 1513
Query: 134 LTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGT 193
GH + C+ ISPDG +GG D TVR WDL + ++ D + ++ + P G
Sbjct: 1512 FQGHTDGASCIDISPDGTKLWTGGLDNTVRSWDLREGRQLQQ-HDFSSQIFSLGYCPTGE 1336
Query: 194 CIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLRE 253
+A G +++++ S H V L F G + +S+ D L W
Sbjct: 1335 WLAVGMESSNVEVLH-HSKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 1159
Query: 254 GQLLY 258
G ++
Sbjct: 1158 GASIF 1144
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 2/169 (1%)
Frame = -3
Query: 1 DPTLERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKP--QLRAFRFAGHKAGVY 58
+ TL R F+GH D + + + + +L TG LDN V W+ + QL+ F+ ++
Sbjct: 1533 NQTLVRQFQGHTDGASCIDISPDGTKLWTGGLDNTVRSWDLREGRQLQQHDFSSQ---IF 1363
Query: 59 SVAFSPVHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDK 118
S+ + P +A G + V + + K L H V + F+ G+ + D
Sbjct: 1362 SLGYCPTGEWLAVGMESSNVEVLHHSKPDKYQ-LHLHESCVLSLKFAYCGKWFVSTGKDN 1186
Query: 119 TVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDL 167
+ W F + + C I+ D + V+G D+ ++++
Sbjct: 1185 LLNAWRTPYGASIFQSKESSSVLSC-DIAADDKYIVTGSGDKKATLYEV 1042
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 56/152 (36%), Gaps = 6/152 (3%)
Frame = -3
Query: 157 GDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIA----SGSTDNSIKLWDLRSN 212
G V++WD++ + T++ P C S +++ +WDL +
Sbjct: 1839 GGKGCVKVWDISQPGTKAPCLNWIACNVTITSGPSSCCRTGAR*SWREASTLSIWDLATP 1660
Query: 213 V-LLQHYRAHTGPVTH-LSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGT 270
++ + P + L+ P G S D + VWDL L+ GH +
Sbjct: 1659 TPRIKAELTSSAPACYALAISPDGKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI 1480
Query: 271 AFSPAGDYFASCGADEQVMVWKTNFDRFLEDY 302
SP G + G D V W R L+ +
Sbjct: 1479 DISPDGTKLWTGGLDNTVRSWDLREGRQLQQH 1384
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 83/209 (39%), Gaps = 1/209 (0%)
Frame = -3
Query: 2 PTLERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVA 61
P ++ A ++ + + K + D + VW+ Q +F GH G +
Sbjct: 1656 PRIKAELTSSAPACYALAISPDGKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCID 1477
Query: 62 FSPVHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVK 121
SP + +G D TVR W EG+ + + + + G LA + V+
Sbjct: 1476 ISPDGTKLWTGGLDNTVRSWD-LREGRQLQQHDFSSQIFSLGYCPTGEWLAVGMESSNVE 1300
Query: 122 IWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDL-NSKKVVRTFEDPT 180
+ ++ + L H++ V + + G+ VS G D + W + ++ E +
Sbjct: 1299 VLH-HSKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSS 1123
Query: 181 GLTNTVSFHPDGTCIASGSTDNSIKLWDL 209
L+ ++ D I +GS D L+++
Sbjct: 1122 VLSCDIA--ADDKYIVTGSGDKKATLYEV 1042
>13335
Length = 863
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Frame = +1
Query: 94 AHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLA 153
A ++R FS L + SDD T+ +W VATQK + GH++ V + SP+G
Sbjct: 55 ASKSSIRVCKFSPSSSHLVSGSDDDTICMWEVATQKLVRSYVGHEDSVMALAYSPNGHYL 234
Query: 154 VSGGDDRTVRIWDLN----SKKVVRTFEDPTGLTNTVSFHP---------DGTC---IAS 197
VSG + + +WD + +R G+T F P TC +A+
Sbjct: 235 VSGSPNGDLYVWDASFGHCRHLTLRVDAHDLGVT-CCEFSPTFGTACAENSSTCNLLLAT 411
Query: 198 GSTDNSIKLWDLRSN-----VLLQH---YRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVW 249
G DN IKLW + V LQ H+ V +F P+ L S S D ++++W
Sbjct: 412 GGKDNLIKLWTFSAQVGSPEVTLQCRDILSGHSDLVMACAFSPSSALLASGSFDKSVRLW 591
Query: 250 DLREGQLLYTLHG-HEGATNGTAFSPAGDYFASCGADEQVMVWK 292
D +G L+++ H AFS G AS D + +WK
Sbjct: 592 DSVKGVALFSIEACHSRFVTCCAFSIDGTLLASGSMDRIIKIWK 723
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 24/188 (12%)
Frame = +1
Query: 4 LERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFK---PQLRAFRFAGHKAGVYSV 60
L RS+ GH+D+V ++ ++ N LV+GS + + VW+ + R H GV
Sbjct: 163 LVRSYVGHEDSVMALAYSPNGHYLVSGSPNGDLYVWDASFGHCRHLTLRVDAHDLGVTCC 342
Query: 61 AFSP------------VHALIASGSKDRTVRLWQPTVEGKST--------VLKAHTGTVR 100
FSP + L+A+G KD ++LW + + S +L H+ V
Sbjct: 343 EFSPTFGTACAENSSTCNLLLATGGKDNLIKLWTFSAQVGSPEVTLQCRDILSGHSDLVM 522
Query: 101 GVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTG-HQNWVRCVHISPDGRLAVSGGDD 159
FS +LA+ S DK+V++W F++ H +V C S DG L SG D
Sbjct: 523 ACAFSPSSALLASGSFDKSVRLWDSVKGVALFSIEACHSRFVTCCAFSIDGTLLASGSMD 702
Query: 160 RTVRIWDL 167
R ++IW L
Sbjct: 703 RIIKIWKL 726
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 97/219 (44%), Gaps = 27/219 (12%)
Frame = +1
Query: 18 VC-FNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHALIASGSKDR 76
VC F+ + LV+GS D+ + +W Q + GH+ V ++A+SP + SGS +
Sbjct: 76 VCKFSPSSSHLVSGSDDDTICMWEVATQKLVRSYVGHEDSVMALAYSPNGHYLVSGSPNG 255
Query: 77 TVRLWQPT---VEGKSTVLKAHT------------GTVRGVTFSSDGRMLATCSDDKTVK 121
+ +W + + + AH GT S+ +LAT D +K
Sbjct: 256 DLYVWDASFGHCRHLTLRVDAHDLGVTCCEFSPTFGTACAENSSTCNLLLATGGKDNLIK 435
Query: 122 IWSVATQ--------KFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVV 173
+W+ + Q + L+GH + V SP L SG D++VR+WD S K V
Sbjct: 436 LWTFSAQVGSPEVTLQCRDILSGHSDLVMACAFSPSSALLASGSFDKSVRLWD--SVKGV 609
Query: 174 RTFEDP---TGLTNTVSFHPDGTCIASGSTDNSIKLWDL 209
F + +F DGT +ASGS D IK+W L
Sbjct: 610 ALFSIEACHSRFVTCCAFSIDGTLLASGSMDRIIKIWKL 726
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +1
Query: 204 IKLWDLRSNVLLQHYR-AHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHG 262
+ +WD+++ + Y+ A + F P+ + L+S S D T+ +W++ +L+ + G
Sbjct: 4 VIVWDVKTGSIKGEYQHASKSSIRVCKFSPSSSHLVSGSDDDTICMWEVATQKLVRSYVG 183
Query: 263 HEGATNGTAFSPAGDYFASCGADEQVMVWKTNF 295
HE + A+SP G Y S + + VW +F
Sbjct: 184 HEDSVMALAYSPNGHYLVSGSPNGDLYVWDASF 282
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 8 FRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRF-AGHKAGVYSVAFSPVH 66
GH D V + F+ + L +GS D V +W+ + F A H V AFS
Sbjct: 496 LSGHSDLVMACAFSPSSALLASGSFDKSVRLWDSVKGVALFSIEACHSRFVTCCAFSIDG 675
Query: 67 ALIASGSKDRTVRLWQPT 84
L+ASGS DR +++W+ T
Sbjct: 676 TLLASGSMDRIIKIWKLT 729
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 248 VWDLREGQLLYTL-HGHEGATNGTAFSPAGDYFASCGADEQVMVWKTNFDRFLEDYTG 304
VWD++ G + H + + FSP+ + S D+ + +W+ + + Y G
Sbjct: 10 VWDVKTGSIKGEYQHASKSSIRVCKFSPSSSHLVSGSDDDTICMWEVATQKLVRSYVG 183
>01327
Length = 2215
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 8/232 (3%)
Frame = +3
Query: 28 VTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQPTVEG 87
++GS D V++++++ R+ GH + V + + S S+D+T+++WQ
Sbjct: 87 LSGSKDKSVVLYDYQNGRLEDRWTGHDREITKVCYGASCNGMFSASRDKTIKMWQRGNSH 266
Query: 88 KSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHIS 147
H V + ++D +L + S D TV+IW V T QN V V
Sbjct: 267 SIRDFIGHDMVVTAIHLNTDNTLLCSGSRDNTVRIWDVETGACLRQNNIPQNLVTDVKWL 446
Query: 148 PDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGT-CIAS----GSTDN 202
P L + G+D+ VRI+D + +VR+F + + DG C+ G
Sbjct: 447 PGSHLIIQAGEDKEVRIYDSRTLGIVRSFTKKQYIQMSCDVTADGQFCLTCSNGFGGNGC 626
Query: 203 SIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGN---FLLSSSLDTTLKVWDL 251
LW L + ++ H + F P+ + ++S D +++VW++
Sbjct: 627 EATLWQLSDGSIQNEFKGHREAIEACLFLPSNQDMTLIATASRDCSVRVWNM 782
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 91/236 (38%), Gaps = 10/236 (4%)
Frame = +3
Query: 67 ALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVA 126
L SGSKD++V L+ H + V + + + + S DKT+K+W
Sbjct: 78 GLCLSGSKDKSVVLYDYQNGRLEDRWTGHDREITKVCYGASCNGMFSASRDKTIKMWQRG 257
Query: 127 TQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTV 186
GH V +H++ D L SG D TVRIWD+ + +R P L V
Sbjct: 258 NSHSIRDFIGHDMVVTAIHLNTDNTLLCSGSRDNTVRIWDVETGACLRQNNIPQNLVTDV 437
Query: 187 SFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSS----- 241
+ P I D ++++D R+ +++ + G F L+ S
Sbjct: 438 KWLPGSHLIIQAGEDKEVRIYDSRTLGIVRSFTKKQYIQMSCDVTADGQFCLTCSNGFGG 617
Query: 242 --LDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGD---YFASCGADEQVMVWK 292
+ TL W L +G + GH A F P+ A+ D V VW
Sbjct: 618 NGCEATL--WQLSDGSIQNEFKGHREAIEACLFLPSNQDMTLIATASRDCSVRVWN 779
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 12/249 (4%)
Frame = +3
Query: 4 LERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFS 63
LE + GH +T VC+ + + + S D + +W F GH V ++ +
Sbjct: 141 LEDRWTGHDREITKVCYGASCNGMFSASRDKTIKMWQRGNSHSIRDFIGHDMVVTAIHLN 320
Query: 64 PVHALIASGSKDRTVRLWQPTVEGKSTVLKAHT--GTVRGVTFSSDGRMLATCSDDKTVK 121
+ L+ SGS+D TVR+W VE + + + + V V + ++ +DK V+
Sbjct: 321 TDNTLLCSGSRDNTVRIWD--VETGACLRQNNIPQNLVTDVKWLPGSHLIIQAGEDKEVR 494
Query: 122 IWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVS-----GGDDRTVRIWDLNSKKVVRTF 176
I+ T + T Q ++ DG+ ++ GG+ +W L+ + F
Sbjct: 495 IYDSRTLGIVRSFTKKQYIQMSCDVTADGQFCLTCSNGFGGNGCEATLWQLSDGSIQNEF 674
Query: 177 EDPTGLTNTVSFHP---DGTCIASGSTDNSIKLWDL--RSNVLLQHYRAHTGPVTHLSFH 231
+ F P D T IA+ S D S+++W++ + V Q++ TGP+T + +
Sbjct: 675 KGHREAIEACLFLPSNQDMTLIATASRDCSVRVWNMFTKECVCEQNFEG-TGPLTSMIAY 851
Query: 232 PTGNFLLSS 240
G+ L+ +
Sbjct: 852 GDGSVLVGT 878
Score = 27.7 bits (60), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 14/69 (20%), Positives = 30/69 (43%)
Frame = +3
Query: 236 FLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWKTNF 295
LS S D ++ ++D + G+L GH+ + + + S D+ + +W+
Sbjct: 81 LCLSGSKDKSVVLYDYQNGRLEDRWTGHDREITKVCYGASCNGMFSASRDKTIKMWQRGN 260
Query: 296 DRFLEDYTG 304
+ D+ G
Sbjct: 261 SHSIRDFIG 287
>12806
Length = 961
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 81/162 (50%), Gaps = 3/162 (1%)
Frame = +3
Query: 133 TLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDG 192
TLTGH +++ + +S D R A+S D T+R+WD+ F + T TV+F PD
Sbjct: 150 TLTGHSHFISDLALSADSRFALSSSWDATLRLWDIKKGSTTSRFINHTRDVLTVAFSPDN 329
Query: 193 TCIASGSTDNSIKLWDLRSNVLLQ-HYRAHTGPVTHLSFHP-TGN-FLLSSSLDTTLKVW 249
IASG D ++K+W++ AHT VT + FH T N ++S+S D T+KVW
Sbjct: 330 RQIASGGRDKNLKIWNIMGECKYTVDANAHTDWVTCVRFHQDTKNPIVVSASNDKTIKVW 509
Query: 250 DLREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVW 291
D L T GH+ TA + +Y S D M W
Sbjct: 510 DNHTMTLKNTFVGHKAQI--TALDMSTNYLVSGSKDGIAMTW 629
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 6/221 (2%)
Frame = +3
Query: 6 RSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPV 65
++ GH ++ + + + + ++ S D + +W+ K RF H V +VAFSP
Sbjct: 147 KTLTGHSHFISDLALSADSRFALSSSWDATLRLWDIKKGSTTSRFINHTRDVLTVAFSPD 326
Query: 66 HALIASGSKDRTVRLWQPTVEGKSTV-LKAHTGTVRGVTFSSDGR--MLATCSDDKTVKI 122
+ IASG +D+ +++W E K TV AHT V V F D + ++ + S+DKT+K+
Sbjct: 327 NRQIASGGRDKNLKIWNIMGECKYTVDANAHTDWVTCVRFHQDTKNPIVVSASNDKTIKV 506
Query: 123 WSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGL 182
W T T GH+ + + +S + VSG D W++ V D
Sbjct: 507 WDNHTMTLKNTFVGHKAQITALDMSTN--YLVSGSKDGIAMTWNVAEGSFVGKI-DCDDQ 677
Query: 183 TNTVSFHPDGTCIASG---STDNSIKLWDLRSNVLLQHYRA 220
N + F+ + T N I++WD ++ +A
Sbjct: 678 INAIKFNIENNKKKVWLFIGTQNGIQIWDYSGEKKIKELKA 800
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 116/296 (39%), Gaps = 6/296 (2%)
Frame = +3
Query: 27 LVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQPTVE 86
L++G DN ++VW+ P+ G +D+T + + T+
Sbjct: 54 LISGGRDNNIIVWDL*PK-------------------------KDGDEDQTWGVPRKTLT 158
Query: 87 GKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHI 146
G H+ + + S+D R + S D T+++W + H V V
Sbjct: 159 G-------HSHFISDLALSADSRFALSSSWDATLRLWDIKKGSTTSRFINHTRDVLTVAF 317
Query: 147 SPDGRLAVSGGDDRTVRIWDLNSK-KVVRTFEDPTGLTNTVSFHPD--GTCIASGSTDNS 203
SPD R SGG D+ ++IW++ + K T V FH D + S S D +
Sbjct: 318 SPDNRQIASGGRDKNLKIWNIMGECKYTVDANAHTDWVTCVRFHQDTKNPIVVSASNDKT 497
Query: 204 IKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGH 263
IK+WD + L + H +T L + N+L+S S D W++ EG + +
Sbjct: 498 IKVWDNHTMTLKNTFVGHKAQITALDM--STNYLVSGSKDGIAMTWNVAEGSFVGKIDCD 671
Query: 264 EGATNGTAFSPAGD---YFASCGADEQVMVWKTNFDRFLEDYTGVSVAKQTRTDPL 316
+ N F+ + + G + +W DY+G K+ + P+
Sbjct: 672 D-QINAIKFNIENNKKKVWLFIGTQNGIQIW---------DYSGEKKIKELKASPI 809
>27465
Length = 658
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = -1
Query: 91 VLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHI-SPD 149
VL+AH + V F+ G T S D+T KIW A+ + TL GH+N V + +P
Sbjct: 376 VLRAHILPLTNVAFNKSGSSFITGSYDRTCKIWDTASAEELHTLEGHRNVVYAIAFNNPF 197
Query: 150 GRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDL 209
G ++G D+T ++W K T T VSF+P T IA+GS D + +LWD+
Sbjct: 196 GDKVITGSFDKTCKLWSTADGKCYHTLRGHTAEIVCVSFNPSSTLIATGSMDTTCRLWDV 17
Query: 210 R 210
Sbjct: 16 E 14
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 11/175 (6%)
Frame = -1
Query: 92 LKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQK---------FAF-TLTGHQNWV 141
LK T V ++ L T S + VK W A +K + F L H +
Sbjct: 529 LKPETDADLVVQEIAEKEQLITPSKQEHVKNWCFACRKTRPKDDHHFYLFKVLRAHILPL 350
Query: 142 RCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFH-PDGTCIASGST 200
V + G ++G DRT +IWD S + + T E + ++F+ P G + +GS
Sbjct: 349 TNVAFNKSGSSFITGSYDRTCKIWDTASAEELHTLEGHRNVVYAIAFNNPFGDKVITGSF 170
Query: 201 DNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQ 255
D + KLW R HT + +SF+P+ + + S+DTT ++WD+ + Q
Sbjct: 169 DKTCKLWSTADGKCYHTLRGHTAEIVCVSFNPSSTLIATGSMDTTCRLWDVEKAQ 5
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Frame = -1
Query: 4 LERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFS 63
L + R H +T+V FN + +TGS D +W+ GH+ VY++AF+
Sbjct: 385 LFKVLRAHILPLTNVAFNKSGSSFITGSYDRTCKIWDTASAEELHTLEGHRNVVYAIAFN 206
Query: 64 -PVHALIASGSKDRTVRLWQPTVEGKST-VLKAHTGTVRGVTFSSDGRMLATCSDDKTVK 121
P + +GS D+T +LW T +GK L+ HT + V+F+ ++AT S D T +
Sbjct: 205 NPFGDKVITGSFDKTCKLWS-TADGKCYHTLRGHTAEIVCVSFNPSSTLIATGSMDTTCR 29
Query: 122 IWSV 125
+W V
Sbjct: 28 LWDV 17
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Frame = -1
Query: 171 KVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSF 230
KV+R P LTN V+F+ G+ +GS D + K+WD S L H V ++F
Sbjct: 379 KVLRAHILP--LTN-VAFNKSGSSFITGSYDRTCKIWDTASAEELHTLEGHRNVVYAIAF 209
Query: 231 H-PTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVM 289
+ P G+ +++ S D T K+W +G+ +TL GH +F+P+ A+ D
Sbjct: 208 NNPFGDKVITGSFDKTCKLWSTADGKCYHTLRGHTAEIVCVSFNPSSTLIATGSMDTTCR 29
Query: 290 VW 291
+W
Sbjct: 28 LW 23
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = -1
Query: 214 LLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAF- 272
L + RAH P+T+++F+ +G+ ++ S D T K+WD + L+TL GH AF
Sbjct: 385 LFKVLRAHILPLTNVAFNKSGSSFITGSYDRTCKIWDTASAEELHTLEGHRNVVYAIAFN 206
Query: 273 SPAGDYFASCGADEQVMVWKT 293
+P GD + D+ +W T
Sbjct: 205 NPFGDKVITGSFDKTCKLWST 143
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1
Query: 7 SFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLR 46
+ RGH + V FN + + TGS+D +W+ + R
Sbjct: 121 TLRGHTAEIVCVSFNPSSTLIATGSMDTTCRLWDVEKAQR 2
>12574
Length = 521
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 70/134 (52%)
Frame = +3
Query: 66 HALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSV 125
HA ++ S ++ +PT K T L HT + V FS +G LA+ S DK +KIW
Sbjct: 99 HAPASATSGTKSSATQKPTYTLKFT-LAGHTKALSAVKFSPNGDWLASSSADKLIKIWGA 275
Query: 126 ATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNT 185
KF T+ GH+ + V S D +L S DD+T++IW+ ++ K ++T + +
Sbjct: 276 YDGKFEKTIAGHKLGLSDVAWSSDSKLLCSASDDKTLKIWEFSTGKCMKTLKGHSNYVFC 455
Query: 186 VSFHPDGTCIASGS 199
+F+P I SGS
Sbjct: 456 CNFNPQSNLIVSGS 497
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Frame = +3
Query: 124 SVATQK----FAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFED- 178
S ATQK FTL GH + V SP+G S D+ ++IW K +T
Sbjct: 132 SSATQKPTYTLKFTLAGHTKALSAVKFSPNGDWLASSSADKLIKIWGAYDGKFEKTIAGH 311
Query: 179 PTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLL 238
GL++ V++ D + S S D ++K+W+ + ++ + H+ V +F+P N ++
Sbjct: 312 KLGLSD-VAWSSDSKLLCSASDDKTLKIWEFSTGKCMKTLKGHSNYVFCCNFNPQSNLIV 488
Query: 239 SSSL 242
S SL
Sbjct: 489 SGSL 500
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%)
Frame = +3
Query: 3 TLERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAF 62
TL+ + GH A+++V F+ N L + S D + +W AGHK G+ VA+
Sbjct: 159 TLKFTLAGHTKALSAVKFSPNGDWLASSSADKLIKIWGAYDGKFEKTIAGHKLGLSDVAW 338
Query: 63 SPVHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCS 115
S L+ S S D+T+++W+ + LK H+ V F+ ++ + S
Sbjct: 339 SSDSKLLCSASDDKTLKIWEFSTGKCMKTLKGHSNYVFCCNFNPQSNLIVSGS 497
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%)
Frame = +3
Query: 175 TFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTG 234
T T + V F P+G +AS S D IK+W + H ++ +++
Sbjct: 171 TLAGHTKALSAVKFSPNGDWLASSSADKLIKIWGAYDGKFEKTIAGHKLGLSDVAWSSDS 350
Query: 235 NFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGDYFAS 281
L S+S D TLK+W+ G+ + TL GH F+P + S
Sbjct: 351 KLLCSASDDKTLKIWEFSTGKCMKTLKGHSNYVFCCNFNPQSNLIVS 491
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%)
Frame = +3
Query: 221 HTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGDYFA 280
HT ++ + F P G++L SSS D +K+W +G+ T+ GH+ + A+S
Sbjct: 183 HTKALSAVKFSPNGDWLASSSADKLIKIWGAYDGKFEKTIAGHKLGLSDVAWSSDSKLLC 362
Query: 281 SCGADEQVMVWKTNFDRFLEDYTG 304
S D+ + +W+ + + ++ G
Sbjct: 363 SASDDKTLKIWEFSTGKCMKTLKG 434
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +3
Query: 1 DPTLERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSV 60
D E++ GHK ++ V ++ + K L + S D + +W F GH V+
Sbjct: 279 DGKFEKTIAGHKLGLSDVAWSSDSKLLCSASDDKTLKIWEFSTGKCMKTLKGHSNYVFCC 458
Query: 61 AFSPVHALIASGSKDR 76
F+P LI SGS R
Sbjct: 459 NFNPQSNLIVSGSLMR 506
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 256 LLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWKTNFDRFLEDYTG 304
L +TL GH A + FSP GD+ AS AD+ + +W +F + G
Sbjct: 162 LKFTLAGHTKALSAVKFSPNGDWLASSSADKLIKIWGAYDGKFEKTIAG 308
>03156
Length = 1014
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 12/249 (4%)
Frame = +1
Query: 4 LERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFS 63
LE + GH +T VC+ + + + S D + +W F GH V ++ +
Sbjct: 31 LEDRWTGHDREITKVCYGASCNGMFSASRDKTIKMWQRGNSHSIRDFIGHDMVVTAIHLN 210
Query: 64 PVHALIASGSKDRTVRLWQPTVEGKSTVLKAHT--GTVRGVTFSSDGRMLATCSDDKTVK 121
+ L+ SGS+D TVR+W VE + + + + V V + ++ +DK V+
Sbjct: 211 TDNTLLCSGSRDNTVRIWD--VETGACLRQNNIPQNLVTDVKWLPGSHLIIQAGEDKEVR 384
Query: 122 IWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVS-----GGDDRTVRIWDLNSKKVVRTF 176
I+ T + T Q ++ DG+ ++ GG+ +W L+ + F
Sbjct: 385 IYDSRTLGIVRSFTKKQYIQMSCDVTADGQFCLTCSNGFGGNGCEATLWQLSDGSIQNEF 564
Query: 177 EDPTGLTNTVSFHP---DGTCIASGSTDNSIKLWDL--RSNVLLQHYRAHTGPVTHLSFH 231
+ F P D T IA+ S D S+++W++ + V Q++ TGP+T + +
Sbjct: 565 KGHREAIEACLFLPSNQDMTLIATASRDCSVRVWNMFTKECVCEQNFEG-TGPLTSMIAY 741
Query: 232 PTGNFLLSS 240
G+ L+ +
Sbjct: 742 GDGSVLVGT 768
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 80/209 (38%), Gaps = 10/209 (4%)
Frame = +1
Query: 94 AHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLA 153
H + V + + + + S DKT+K+W GH V +H++ D L
Sbjct: 49 GHDREITKVCYGASCNGMFSASRDKTIKMWQRGNSHSIRDFIGHDMVVTAIHLNTDNTLL 228
Query: 154 VSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNV 213
SG D TVRIWD+ + +R P L V + P I D ++++D R+
Sbjct: 229 CSGSRDNTVRIWDVETGACLRQNNIPQNLVTDVKWLPGSHLIIQAGEDKEVRIYDSRTLG 408
Query: 214 LLQHYRAHTGPVTHLSFHPTGNFLLSSS-------LDTTLKVWDLREGQLLYTLHGHEGA 266
+++ + G F L+ S + TL W L +G + GH A
Sbjct: 409 IVRSFTKKQYIQMSCDVTADGQFCLTCSNGFGGNGCEATL--WQLSDGSIQNEFKGHREA 582
Query: 267 TNGTAFSPAGD---YFASCGADEQVMVWK 292
F P+ A+ D V VW
Sbjct: 583 IEACLFLPSNQDMTLIATASRDCSVRVWN 669
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +1
Query: 135 TGHQNWVR--CVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDG 192
TGH + C S +G + S D+T+++W + +R F + + + D
Sbjct: 46 TGHDREITKVCYGASCNGMFSAS--RDKTIKMWQRGNSHSIRDFIGHDMVVTAIHLNTDN 219
Query: 193 TCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLR 252
T + SGS DN++++WD+ + L+ VT + + P + ++ + D ++++D R
Sbjct: 220 TLLCSGSRDNTVRIWDVETGACLRQNNIPQNLVTDVKWLPGSHLIIQAGEDKEVRIYDSR 399
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/78 (20%), Positives = 29/78 (37%)
Frame = +1
Query: 214 LLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFS 273
L + H +T + + + N + S+S D T+K+W + GH+ +
Sbjct: 31 LEDRWTGHDREITKVCYGASCNGMFSASRDKTIKMWQRGNSHSIRDFIGHDMVVTAIHLN 210
Query: 274 PAGDYFASCGADEQVMVW 291
S D V +W
Sbjct: 211 TDNTLLCSGSRDNTVRIW 264
>17602
Length = 481
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Frame = +3
Query: 163 RIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRS-NVLLQHYRAH 221
RIWD+ + K ++T + V F+ DG+ I S S D ++WD S L
Sbjct: 3 RIWDVKTGKCLKTLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLXTLIDDD 182
Query: 222 TGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGH--EGATNGTAFS-PAGDY 278
PV+ + F P G ++L+++LD TLK+WD +G+ L T GH E FS G +
Sbjct: 183 NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYVGHRNEKYCIFANFSVTGGKW 362
Query: 279 FASCGADEQVMVW 291
S D V +W
Sbjct: 363 IVSGSEDNMVYIW 401
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +3
Query: 205 KLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHE 264
++WD+++ L+ AH+ PVT + F+ G+ ++SSS D ++WD GQ L TL +
Sbjct: 3 RIWDVKTGKCLKTLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLXTLIDDD 182
Query: 265 G-ATNGTAFSPAGDYFASCGADEQVMVWKTNFDRFLEDYTG 304
+ FSP G Y + D + +W + + L+ Y G
Sbjct: 183 NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYVG 305
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
Frame = +3
Query: 79 RLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQ 138
R+W L AH+ V V F+ DG ++ + S D +IW A+ + TL
Sbjct: 3 RIWDVKTGKCLKTLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLXTLIDDD 182
Query: 139 N-WVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFH---PDGTC 194
N V V SP+G+ ++ D T+++WD + K ++T+ + + G
Sbjct: 183 NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYVGHRNEKYCIFANFSVTGGKW 362
Query: 195 IASGSTDNSIKLWDL 209
I SGS DN + +W+L
Sbjct: 363 IVSGSEDNMVYIWNL 407
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 7/138 (5%)
Frame = +3
Query: 6 RSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKP-QLRAFRFAGHKAGVYSVAFSP 64
++ H D VT+V FN + +V+ S D +W+ Q V V FSP
Sbjct: 36 KTLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLXTLIDDDNPPVSFVKFSP 215
Query: 65 VHALIASGSKDRTVRLWQPTVEGKSTVLKAHTG--TVRGVTFS----SDGRMLATCSDDK 118
I + + D T++LW + K LK + G + F+ + G+ + + S+D
Sbjct: 216 NGKYILAATLDNTLKLWDYS---KGKCLKTYVGHRNEKYCIFANFSVTGGKWIVSGSEDN 386
Query: 119 TVKIWSVATQKFAFTLTG 136
V IW++ Q + TG
Sbjct: 387 MVYIWNLLDQGDSTEATG 440
>17266
Length = 480
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Frame = -1
Query: 23 NMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQ 82
+M+ V+G+ D +W+ + + F+GH++ + ++ + P A+GS D T RL+
Sbjct: 426 DMRTFVSGACDASAKLWDVRDGMCKQTFSGHESDINAITYFPNGHAFATGSDDATCRLFD 247
Query: 83 PTVEGKSTVLKAHTGTVRGVT---FSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQN 139
+ + + +H + G+T FS GR+L DD IW V Q+ L GH N
Sbjct: 246 IRAD-QEIGMYSHDNIICGITSVAFSKSGRLLLGGYDDFNCNIWDVLKQERTGVLAGHDN 70
Query: 140 WVRCVHISPDGRLAVSG 156
V C+ ++ DG +G
Sbjct: 69 RVSCLGVTEDGSAVATG 19
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Frame = -1
Query: 144 VHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNS 203
+ ++PD R VSG D + ++WD+ +TF N +++ P+G A+GS D +
Sbjct: 441 LSLAPDMRTFVSGACDASAKLWDVRDGMCKQTFSGHESDINAITYFPNGHAFATGSDDAT 262
Query: 204 IKLWDLRSNVLLQHYRAHT--GPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLH 261
+L+D+R++ + Y +T ++F +G LL D +WD+ + + L
Sbjct: 261 CRLFDIRADQEIGMYSHDNIICGITSVAFSKSGRLLLGGYDDFNCNIWDVLKQERTGVLA 82
Query: 262 GHE 264
GH+
Sbjct: 81 GHD 73
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Frame = -1
Query: 186 VSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTT 245
+S PD SG+ D S KLWD+R + Q + H + +++ P G+ + S D T
Sbjct: 441 LSLAPDMRTFVSGACDASAKLWDVRDGMCKQTFSGHESDINAITYFPNGHAFATGSDDAT 262
Query: 246 LKVWDLREGQLLYTLHGHEGATNG---TAFSPAGDYFASCGADEQVMVWKTNFDRFLEDY 302
+++D+R Q + ++ H+ G AFS +G D +W D ++
Sbjct: 261 CRLFDIRADQEI-GMYSHDNIICGITSVAFSKSGRLLLGGYDDFNCNIW----DVLKQER 97
Query: 303 TGVSVAKQTRTDPL 316
TGV R L
Sbjct: 96 TGVLAGHDNRVSCL 55
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 3/146 (2%)
Frame = -1
Query: 60 VAFSPVHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKT 119
++ +P SG+ D + +LW H + +T+ +G AT SDD T
Sbjct: 441 LSLAPDMRTFVSGACDASAKLWDVRDGMCKQTFSGHESDINAITYFPNGHAFATGSDDAT 262
Query: 120 VKIWSVATQKFAFTLTGHQNW---VRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTF 176
+++ + + + H N + V S GRL + G DD IWD+ ++
Sbjct: 261 CRLFDIRADQ-EIGMYSHDNIICGITSVAFSKSGRLLLGGYDDFNCNIWDVLKQERTGVL 85
Query: 177 EDPTGLTNTVSFHPDGTCIASGSTDN 202
+ + DG+ +A+GS D+
Sbjct: 84 AGHDNRVSCLGVTEDGSAVATGSWDS 7
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 3/148 (2%)
Frame = -1
Query: 102 VTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRT 161
++ + D R + + D + K+W V T +GH++ + + P+G +G DD T
Sbjct: 441 LSLAPDMRTFVSGACDASAKLWDVRDGMCKQTFSGHESDINAITYFPNGHAFATGSDDAT 262
Query: 162 VRIWDLNSKKVVRTFEDPT---GLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHY 218
R++D+ + + + + G+T +V+F G + G D + +WD+
Sbjct: 261 CRLFDIRADQEIGMYSHDNIICGIT-SVAFSKSGRLLLGGYDDFNCNIWDVLKQERTGVL 85
Query: 219 RAHTGPVTHLSFHPTGNFLLSSSLDTTL 246
H V+ L G+ + + S D+ L
Sbjct: 84 AGHDNRVSCLGVTEDGSAVATGSWDSFL 1
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Frame = -1
Query: 1 DPTLERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKP--QLRAFRFAGHKAGVY 58
D +++F GH+ + ++ + N TGS D +++ + ++ + G+
Sbjct: 366 DGMCKQTFSGHESDINAITYFPNGHAFATGSDDATCRLFDIRADQEIGMYSHDNIICGIT 187
Query: 59 SVAFSPVHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCS 115
SVAFS L+ G D +W + ++ VL H V + + DG +AT S
Sbjct: 186 SVAFSKSGRLLLGGYDDFNCNIWDVLKQERTGVLAGHDNRVSCLGVTEDGSAVATGS 16
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%)
Frame = -1
Query: 216 QHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPA 275
+H +A G LS P +S + D + K+WD+R+G T GHE N + P
Sbjct: 477 RHSQATLGT**VLSLAPDMRTFVSGACDASAKLWDVRDGMCKQTFSGHESDINAITYFPN 298
Query: 276 GDYFASCGADEQVMVWKTNFDRFLEDYT 303
G FA+ D ++ D+ + Y+
Sbjct: 297 GHAFATGSDDATCRLFDIRADQEIGMYS 214
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = -1
Query: 14 AVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHALIASGS 73
+TSV F+ + + L+ G D +W+ Q R AGH V + + + +A+GS
Sbjct: 195 GITSVAFSKSGRLLLGGYDDFNCNIWDVLKQERTGVLAGHDNRVSCLGVTEDGSAVATGS 16
Query: 74 KD 75
D
Sbjct: 15 WD 10
>19498
Length = 903
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 30/168 (17%)
Frame = -1
Query: 157 GDDRTVRIWDL------------NSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSI 204
GD V IW++ + +V+ + G N V + +G +ASG D I
Sbjct: 891 GDSGKVVIWNMAPIRDEKEEADDDVPRVLCQMDSHLGCVNCVRWSENGKFLASGGDDKLI 712
Query: 205 KLWDLR----------SNV-LLQHYRA------HTGPVTHLSFHPTGNFLLSSSLDTTLK 247
+W + SNV +L+H+R+ H G V L++ P +L S S+D T+
Sbjct: 711 MIWQISRGFGSGKSFGSNVTILEHWRSVATLRGHAGDVLDLAWSPQDLWLASCSVDNTIV 532
Query: 248 VWD-LREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWKTN 294
VW+ L+ + + + GH G G + P G Y AS D+ + VW+T+
Sbjct: 531 VWNALKFSEQVAVIRGHAGMVKGVTWDPVGRYLASQSDDKTLRVWRTS 388
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 106/272 (38%), Gaps = 47/272 (17%)
Frame = -1
Query: 2 PTLERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQ-------------LRAF 48
P + H V V ++ N K L +G D +M+W L +
Sbjct: 816 PRVLCQMDSHLGCVNCVRWSENGKFLASGGDDKLIMIWQISRGFGSGKSFGSNVTILEHW 637
Query: 49 R----FAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQP-TVEGKSTVLKAHTGTVRGVT 103
R GH V +A+SP +AS S D T+ +W + V++ H G V+GVT
Sbjct: 636 RSVATLRGHAGDVLDLAWSPQDLWLASCSVDNTIVVWNALKFSEQVAVIRGHAGMVKGVT 457
Query: 104 FSSDGRMLATCSDDKTVKIWSVA------TQKFAFTLTGHQNWVRCVHISPDGRLAVSG- 156
+ GR LA+ SDDKT+++W + K F G V ++ SPDG VS
Sbjct: 456 WDPVGRYLASQSDDKTLRVWRTSDWKEETCVKSCFKECGGTTHVLRLNWSPDGNHVVSAH 277
Query: 157 ---GDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHP---------------DGTCIASG 198
T +I + N F V F+P +C A G
Sbjct: 276 AMNNAXPTAQIIERNGWGTSLDFVGHRKAITVVRFNPKILSKQIKKSAEKQQQYSCCAIG 97
Query: 199 STDNSIKLW--DLRSNVLLQH--YRAHTGPVT 226
S D S+ +W LR +++ H + H G V
Sbjct: 96 SKDRSLSIWLTALRRPLVVMHACLKVHPGCVV 1
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 12/205 (5%)
Frame = -1
Query: 92 LKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVAT-----QKFAFTLTGHQNWVRCVHI 146
+ +H G V V +S +G+ LA+ DDK + IW ++ + F +T ++W
Sbjct: 798 MDSHLGCVNCVRWSENGKFLASGGDDKLIMIWQISRGFGSGKSFGSNVTILEHW------ 637
Query: 147 SPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKL 206
+ V T G +++ P +AS S DN+I +
Sbjct: 636 ------------------------RSVATLRGHAGDVLDLAWSPQDLWLASCSVDNTIVV 529
Query: 207 WD-LRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVW---DLREGQLLYTLHG 262
W+ L+ + + R H G V +++ P G +L S S D TL+VW D +E + +
Sbjct: 528 WNALKFSEQVAVIRGHAGMVKGVTWDPVGRYLASQSDDKTLRVWRTSDWKEETCVKSCFK 349
Query: 263 HEGATNGTA---FSPAGDYFASCGA 284
G T +SP G++ S A
Sbjct: 348 ECGGTTHVLRLNWSPDGNHVVSAHA 274
>16199
Length = 694
Score = 53.1 bits (126), Expect(2) = 2e-12, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +2
Query: 188 FHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPT 233
FHPDG A+G+ D+ IK+WDL+ + +++ H GPVT +SF T
Sbjct: 95 FHPDGLIFATGTEDSVIKIWDLKERANVANFQGHQGPVTSISFSET 232
Score = 36.6 bits (83), Expect(2) = 2e-12, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 234 GNFLLSSSLDTTLKVWDLREGQLLYTLH-GHEGATNGTAFSPAGDYFASCGADEQVMVWK 292
G +L +S+ D+ +K+WDLR+ + TL G + F +G Y A G+D +V + K
Sbjct: 232 GYYLATSAEDSVVKLWDLRKLKNFKTLQLGDKYEVKALCFDQSGTYLAVAGSDVRVYLCK 411
Score = 40.8 bits (94), Expect(2) = 2e-07, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Frame = +1
Query: 149 DGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGL-TNTVSFHPDGTCIASGSTDNSIKLW 207
+G + +D V++WDL K +T + + F GT +A +D ++++
Sbjct: 229 NGYYLATSAEDSVVKLWDLRKLKNFKTLQLGDKYEVKALCFDQSGTYLAVAGSD--VRVY 402
Query: 208 DLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDL 251
+ L + HT T + F NF+ S+S+D +LK + L
Sbjct: 403 LCKQWNELAVFNDHTATATGVRFGTNANFIASASMDRSLKFFGL 534
Score = 32.0 bits (71), Expect(2) = 2e-07, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 104 FSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHIS 147
F DG + AT ++D +KIW + + GHQ V + S
Sbjct: 95 FHPDGLIFATGTEDSVIKIWDLKERANVANFQGHQGPVTSISFS 226
Score = 43.5 bits (101), Expect(2) = 3e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Frame = +1
Query: 107 DGRMLATCSDDKTVKIWSVATQKFAFTLT-GHQNWVRCVHISPDG-RLAVSGGDDRTVRI 164
+G LAT ++D VK+W + K TL G + V+ + G LAV+G D VR+
Sbjct: 229 NGYYLATSAEDSVVKLWDLRKLKNFKTLQLGDKYEVKALCFDQSGTYLAVAGSD---VRV 399
Query: 165 WDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDL 209
+ + F D T V F + IAS S D S+K + L
Sbjct: 400 YLCKQWNELAVFNDHTATATGVRFGTNANFIASASMDRSLKFFGL 534
Score = 28.9 bits (63), Expect(2) = 3e-07, Method: Compositional matrix adjust.
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +2
Query: 62 FSPVHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFS 105
F P + A+G++D +++W + H G V ++FS
Sbjct: 95 FHPDGLIFATGTEDSVIKIWDLKERANVANFQGHQGPVTSISFS 226
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 225 VTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFS 273
+T FHP G + + D+ +K+WDL+E + GH+G +FS
Sbjct: 80 LTCAQFHPDGLIFATGTEDSVIKIWDLKERANVANFQGHQGPVTSISFS 226
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 143 CVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSF 188
C PDG + +G +D ++IWDL + V F+ G ++SF
Sbjct: 86 CAQFHPDGLIFATGTEDSVIKIWDLKERANVANFQGHQGPVTSISF 223
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 14 AVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFS 63
A+T F+ + TG+ D+ + +W+ K + F GH+ V S++FS
Sbjct: 77 ALTCAQFHPDGLIFATGTEDSVIKIWDLKERANVANFQGHQGPVTSISFS 226
>00825
Length = 1821
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 7/231 (3%)
Frame = -2
Query: 71 SGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKF 130
SG+ D + W + + ++AH G V G+ S G+ +C DKT+K WS+ +
Sbjct: 1820 SGACDGELICWNLPKQQMACRVQAHDGIVHGMAAHSSGQYFFSCGSDKTIKQWSLDPEGT 1641
Query: 131 AFTLTGHQNWVRCVHISPDGR----LAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTV 186
+ +C++ S D + V+ G V +WD + +R+F + V
Sbjct: 1640 IAPEPVNTLLAKCIYTSLDHHWKDDIFVTSGS--RVDVWDEKRSEPMRSFSWGVESVHHV 1467
Query: 187 SFHPDGT-CIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSS-LDT 244
F+P T + + + D SI L+D+R + L+ LS++P F ++S+ D
Sbjct: 1466 KFNPVETYLLGAAAHDRSILLYDMRGSAPLRKV-VMKMRTNALSWNPMEAFTITSANEDG 1290
Query: 245 TLKVWDLREGQLLYTLH-GHEGATNGTAFSPAGDYFASCGADEQVMVWKTN 294
L +D+R+ + +H H A + P G F S G D+ + ++ +
Sbjct: 1289 NLYTFDMRKLSMPLNMHRDHTAAVMDVDYCPTGREFVSAGYDKVIRIFPVD 1137
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 112/279 (40%), Gaps = 14/279 (5%)
Frame = -2
Query: 29 TGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQPTVEGK 88
+G+ D ++ WN Q A R H V+ +A S D+T++ W EG
Sbjct: 1820 SGACDGELICWNLPKQQMACRVQAHDGIVHGMAAHSSGQYFFSCGSDKTIKQWSLDPEGT 1641
Query: 89 STVLKAHTGTVRGVTFSSDGRMLATCSDD------KTVKIWSVATQKFAFTLTGHQNWVR 142
+T + + S D DD V +W + + + V
Sbjct: 1640 IAPEPVNTLLAKCIYTSLDHHW----KDDIFVTSGSRVDVWDEKRSEPMRSFSWGVESVH 1473
Query: 143 CVHISP-DGRLAVSGGDDRTVRIWDLNS----KKVVRTFEDPTGLTNTVSFHP-DGTCIA 196
V +P + L + DR++ ++D+ +KVV TN +S++P + I
Sbjct: 1472 HVKFNPVETYLLGAAAHDRSILLYDMRGSAPLRKVVMKMR-----TNALSWNPMEAFTIT 1308
Query: 197 SGSTDNSIKLWDLRS-NVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQ 255
S + D ++ +D+R ++ L +R HT V + + PTG +S+ D ++++ + +G
Sbjct: 1307 SANEDGNLYTFDMRKLSMPLNMHRDHTAAVMDVDYCPTGREFVSAGYDKVIRIFPVDKGH 1128
Query: 256 LLYTLHGHEGATNGT-AFSPAGDYFASCGADEQVMVWKT 293
H G+ +S Y S + + VWK
Sbjct: 1127 SREVYHTKRMQRVGSVVWSRDSKYIFSASDEMNIRVWKA 1011
>02960
Length = 1577
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 124/297 (41%), Gaps = 16/297 (5%)
Frame = +2
Query: 10 GHKDAVTSVCF-----NHNMKQLVTGSLDNCVMVWNFKPQLRA----FRFAGHKAGVYSV 60
GH V V + + + VTGS D +VW ++ + GH A V V
Sbjct: 596 GHTSPVKCVAWIKHDESSGVSTFVTGSHDQTALVWQWQRETNEVDCRLSCRGHAASVDCV 775
Query: 61 AFSPVHALIASGSKDRTVRLWQP--TVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDK 118
A SP + +GS D+ ++LW V+G + T R +
Sbjct: 776 AVSPDSQQMCTGSWDKMLKLWSTDCNVDGDQS-----EDTERPSKKKKSAKS-------- 916
Query: 119 TVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFED 178
+ T+ TL+GH V V R+ S D ++R+WDL++ + +
Sbjct: 917 -----TTQTRVPVLTLSGHAEAVSAVRWLDPHRVVTSSW-DHSLRLWDLHTAQQTSLIQG 1078
Query: 179 PTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSN---VLLQHYRAHTGPVTHLSFHPTGN 235
+ + V++ P + +GS D ++L D R + + + +HTG VT + + PT
Sbjct: 1079SKAVLD-VAYSPLSHMLITGSADRHVRLVDPRCSEGETVKCAFTSHTGWVTGVDWSPTRE 1255
Query: 236 FL-LSSSLDTTLKVWDLREGQL-LYTLHGHEGATNGTAFSPAGDYFASCGADEQVMV 290
L LS S D LK+WD R + LY ++ HE +S + S G D ++ V
Sbjct: 1256HLFLSGSYDNVLKLWDTRSPKATLYDMNWHEDRILAVDWS-IPELLLSGGVDNKLHV 1423
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 89/172 (51%), Gaps = 6/172 (3%)
Frame = +2
Query: 7 SFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVH 66
+ GH +AV++V + + ++VT S D+ + +W+ + G KA V VA+SP+
Sbjct: 944 TLSGHAEAVSAVRWL-DPHRVVTSSWDHSLRLWDLHTAQQTSLIQGSKA-VLDVAYSPLS 1117
Query: 67 ALIASGSKDRTVRLWQPTVEGKSTV---LKAHTGTVRGVTFS-SDGRMLATCSDDKTVKI 122
++ +GS DR VRL P TV +HTG V GV +S + + + S D +K+
Sbjct: 1118 HMLITGSADRHVRLVDPRCSEGETVKCAFTSHTGWVTGVDWSPTREHLFLSGSYDNVLKL 1297
Query: 123 WSVATQKFA-FTLTGHQNWVRCVHIS-PDGRLAVSGGDDRTVRIWDLNSKKV 172
W + K + + H++ + V S P+ L +SGG D + ++ +S K+
Sbjct: 1298 WDTRSPKATLYDMNWHEDRILAVDWSIPE--LLLSGGVDNKLHVFSYSSAKL 1447
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 110/264 (41%), Gaps = 41/264 (15%)
Frame = +2
Query: 71 SGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTF-----SSDGRMLATCSDDKTVKIWSV 125
SGS D TVRLW E T+ HT V+ V + SS T S D+T +W
Sbjct: 530 SGSYDNTVRLWSTKGEAIMTI-PGHTSPVKCVAWIKHDESSGVSTFVTGSHDQTALVWQW 706
Query: 126 ATQ----KFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFED--- 178
+ + GH V CV +SPD + +G D+ +++W + ED
Sbjct: 707 QRETNEVDCRLSCRGHAASVDCVAVSPDSQQMCTGSWDKMLKLWSTDCNVDGDQSEDTER 886
Query: 179 PTGLTN-------------TVSFHPDGTC---------IASGSTDNSIKLWDL---RSNV 213
P+ T+S H + + + S D+S++LWDL +
Sbjct: 887 PSKKKKSAKSTTQTRVPVLTLSGHAEAVSAVRWLDPHRVVTSSWDHSLRLWDLHTAQQTS 1066
Query: 214 LLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLR--EGQLLY-TLHGHEGATNGT 270
L+Q +A V +++ P + L++ S D +++ D R EG+ + H G G
Sbjct: 1067LIQGSKA----VLDVAYSPLSHMLITGSADRHVRLVDPRCSEGETVKCAFTSHTGWVTGV 1234
Query: 271 AFSPAGDY-FASCGADEQVMVWKT 293
+SP ++ F S D + +W T
Sbjct: 1235DWSPTREHLFLSGSYDNVLKLWDT 1306
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 32/197 (16%)
Frame = +2
Query: 7 SFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWN-------------------------- 40
S RGH +V V + + +Q+ TGS D + +W+
Sbjct: 740 SCRGHAASVDCVAVSPDSQQMCTGSWDKMLKLWSTDCNVDGDQSEDTERPSKKKKSAKST 919
Query: 41 FKPQLRAFRFAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVR 100
+ ++ +GH V +V + H ++ S S D ++RLW ++++++ + V
Sbjct: 920 TQTRVPVLTLSGHAEAVSAVRWLDPHRVVTS-SWDHSLRLWDLHTAQQTSLIQG-SKAVL 1093
Query: 101 GVTFSSDGRMLATCSDDKTVKIWSV-----ATQKFAFTLTGHQNWVRCVHISPDGR-LAV 154
V +S ML T S D+ V++ T K AF T H WV V SP L +
Sbjct: 1094DVAYSPLSHMLITGSADRHVRLVDPRCSEGETVKCAF--TSHTGWVTGVDWSPTREHLFL 1267
Query: 155 SGGDDRTVRIWDLNSKK 171
SG D +++WD S K
Sbjct: 1268SGSYDNVLKLWDTRSPK 1318
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Frame = +2
Query: 197 SGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSF----HPTG-NFLLSSSLDTTLKVWDL 251
SGS DN+++LW + ++ HT PV +++ +G + ++ S D T VW
Sbjct: 530 SGSYDNTVRLWSTKGEAIMT-IPGHTSPVKCVAWIKHDESSGVSTFVTGSHDQTALVWQW 706
Query: 252 R----EGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWKTN 294
+ E + GH + + A SP + D+ + +W T+
Sbjct: 707 QRETNEVDCRLSCRGHAASVDCVAVSPDSQQMCTGSWDKMLKLWSTD 847
>03395
Length = 2795
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 87/208 (41%), Gaps = 9/208 (4%)
Frame = +2
Query: 56 GVYSVAFSPVHALIASGSKDRTVRLW---QPTVEGKS-----TVLKAHTGTVRGVTFSSD 107
GV ++A + + SG + VR+W + + GK+ +K H G V + ++
Sbjct: 2 GVTAIAVTSCGTKLVSGGGEGQVRVWDIVKDMLTGKTRGDLVANMKEHKGKVTAIQIHTN 181
Query: 108 GRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDL 167
R + S D + IW + T + + + +CV ++ G D + W++
Sbjct: 182 DRCCVSASTDGSTIIWDLITNTRSQIVLAN-TLFKCVCFGGKDLHILTSGTDHKIGYWEV 358
Query: 168 NSKKVVRTFE-DPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVT 226
++R E TG NT+ DG I +G D+ +KLW + H+ +T
Sbjct: 359 GDGGLLRELEGSQTGAINTIDIDRDGQTILTGGEDSLLKLWRYNEGEVTHTGIGHSNQIT 538
Query: 227 HLSFHPTGNFLLSSSLDTTLKVWDLREG 254
P ++++S D L +W +G
Sbjct: 539 KARICPNRHYIVSGGEDGALHIWKFPDG 622
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 9/203 (4%)
Frame = +2
Query: 99 VRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTG--------HQNWVRCVHISPDG 150
V + +S G L + + V++W + G H+ V + I +
Sbjct: 5 VTAIAVTSCGTKLVSGGGEGQVRVWDIVKDMLTGKTRGDLVANMKEHKGKVTAIQIHTND 184
Query: 151 RLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLR 210
R VS D + IWDL + + T L V F I + TD+ I W++
Sbjct: 185 RCCVSASTDGSTIIWDLITNTRSQIVLANT-LFKCVCFGGKDLHILTSGTDHKIGYWEVG 361
Query: 211 SNVLLQHYR-AHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNG 269
LL+ + TG + + G +L+ D+ LK+W EG++ +T GH
Sbjct: 362 DGGLLRELEGSQTGAINTIDIDRDGQTILTGGEDSLLKLWRYNEGEVTHTGIGHSNQITK 541
Query: 270 TAFSPAGDYFASCGADEQVMVWK 292
P Y S G D + +WK
Sbjct: 542 ARICPNRHYIVSGGEDGALHIWK 610
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 1/163 (0%)
Frame = +2
Query: 4 LERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFS 63
L + + HK VT++ + N + V+ S D ++W+ R+ + V F
Sbjct: 122 LVANMKEHKGKVTAIQIHTNDRCCVSASTDGSTIIWDLITNTRSQIVLANTL-FKCVCFG 298
Query: 64 PVHALIASGSKDRTVRLWQPTVEGKSTVLK-AHTGTVRGVTFSSDGRMLATCSDDKTVKI 122
I + D + W+ G L+ + TG + + DG+ + T +D +K+
Sbjct: 299 GKDLHILTSGTDHKIGYWEVGDGGLLRELEGSQTGAINTIDIDRDGQTILTGGEDSLLKL 478
Query: 123 WSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIW 165
W + T GH N + I P+ VSGG+D + IW
Sbjct: 479 WRYNEGEVTHTGIGHSNQITKARICPNRHYIVSGGEDGALHIW 607
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 1 DPTLERSFRGHK-DAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYS 59
D L R G + A+ ++ + + + ++TG D+ + +W + GH +
Sbjct: 362 DGGLLRELEGSQTGAINTIDIDRDGQTILTGGEDSLLKLWRYNEGEVTHTGIGHSNQITK 541
Query: 60 VAFSPVHALIASGSKDRTVRLWQ 82
P I SG +D + +W+
Sbjct: 542 ARICPNRHYIVSGGEDGALHIWK 610
>11493
Length = 535
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 7/161 (4%)
Frame = -2
Query: 94 AHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTG-----HQNWVRCVHISP 148
+H V VT S+ + + T VK+W ++ ++ N++R V + P
Sbjct: 483 SHGEVVCAVTISNPTKYVYT-GGKGCVKVWDISQPGNKNPVSQLDCLQRDNYIRSVKLLP 307
Query: 149 DGRLAVSGGDDRTVRIWDLNSK--KVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKL 206
DGR + GG+ + IWDL S ++ ++ PD S +D +I +
Sbjct: 306 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSAAPACYALAISPDSKVCFSCCSDGNIAV 127
Query: 207 WDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLK 247
WDL + +L++ ++ HT + + P G+ L + LD T++
Sbjct: 126 WDLHNEILVRQFQGHTDGASCIDISPDGSRLWTGGLDNTVR 4
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 7/167 (4%)
Frame = -2
Query: 46 RAFRFAGHKAGVYSVAFSPVHALIASGSKDRTVRLW---QPTVEGKSTVLKA--HTGTVR 100
R H V +V S + +G K V++W QP + + L +R
Sbjct: 501 RQINTLSHGEVVCAVTISNPTKYVYTGGKG-CVKVWDISQPGNKNPVSQLDCLQRDNYIR 325
Query: 101 GVTFSSDGRMLATCSDDKTVKIWSVA--TQKFAFTLTGHQNWVRCVHISPDGRLAVSGGD 158
V DGR L + + IW +A T + LT + ISPD ++ S
Sbjct: 324 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSAAPACYALAISPDSKVCFSCCS 145
Query: 159 DRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIK 205
D + +WDL+++ +VR F+ T + + PDG+ + +G DN+++
Sbjct: 144 DGNIAVWDLHNEILVRQFQGHTDGASCIDISPDGSRLWTGGLDNTVR 4
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 7/159 (4%)
Frame = -2
Query: 137 HQNWVRCVHISPDGRLAVSGGDDRTVRIWDLN---SKKVVRTFE--DPTGLTNTVSFHPD 191
H V V IS + +GG V++WD++ +K V + +V PD
Sbjct: 480 HGEVVCAVTISNPTKYVYTGGKG-CVKVWDISQPGNKNPVSQLDCLQRDNYIRSVKLLPD 304
Query: 192 GTCIASGSTDNSIKLWDLRSNV-LLQHYRAHTGPVTH-LSFHPTGNFLLSSSLDTTLKVW 249
G + G +++ +WDL S ++ P + L+ P S D + VW
Sbjct: 303 GRTLIVGGEASNLSIWDLASPTPRIKAELTSAAPACYALAISPDSKVCFSCCSDGNIAVW 124
Query: 250 DLREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQV 288
DL L+ GH + SP G + G D V
Sbjct: 123 DLHNEILVRQFQGHTDGASCIDISPDGSRLWTGGLDNTV 7
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 33/78 (42%)
Frame = -2
Query: 2 PTLERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVA 61
P ++ A ++ + + K + D + VW+ ++ +F GH G +
Sbjct: 237 PRIKAELTSAAPACYALAISPDSKVCFSCCSDGNIAVWDLHNEILVRQFQGHTDGASCID 58
Query: 62 FSPVHALIASGSKDRTVR 79
SP + + +G D TVR
Sbjct: 57 ISPDGSRLWTGGLDNTVR 4
>03387
Length = 1891
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 35/236 (14%)
Frame = +1
Query: 92 LKAHTGTVRGVTFSSD--GRMLATCSDDKTVKIWSV-ATQKFAFTL------TGHQNWVR 142
LK H G++++ + G +L + SDD T+ +W + +TQ+ + + TGH + V
Sbjct: 349 LKGHQKEGYGLSWNPNLNGHLL-SASDDHTICLWDINSTQRESRVVDAHTIFTGHTSVVE 525
Query: 143 CV-----HISPDGRLAVSGGDDRTVRIWDLNSK---KVVRTFEDPTGLTNTVSFHPDGTC 194
V H S G +A DD+ + IWD S K + T N +SF+P
Sbjct: 526 DVAWHLLHESLFGSVA----DDQKLMIWDTRSNTTSKPSHVVDAHTAEVNCLSFNPYSEF 693
Query: 195 I-ASGSTDNSIKLWDLRS-NVLLQHYRAHTGPVTHLSFHPTGNFLLSSS-LDTTLKVWDL 251
I A+GS D ++ LWDLR+ + L + +H + + + P +L+SS D L VWDL
Sbjct: 694 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 873
Query: 252 RE--------------GQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVM-VWK 292
+ +LL+ GH + +++P + +++ +M VW+
Sbjct: 874 SKIGEEQLPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIVCSVSEDNIMQVWQ 1041
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 9/215 (4%)
Frame = +1
Query: 8 FRGHKDAVTSVCFNHNMKQLVTGSL--DNCVMVWNFKPQL---RAFRFAGHKAGVYSVAF 62
F GH V V + H + + + GS+ D +M+W+ + + H A V ++F
Sbjct: 499 FTGHTSVVEDVAW-HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHVVDAHTAEVNCLSF 675
Query: 63 SPVHALI-ASGSKDRTVRLWQ-PTVEGKSTVLKAHTGTVRGVTFSSDGR-MLATCSDDKT 119
+P I A+GS D+TV LW ++ K ++H + V +S +LA+ D+
Sbjct: 676 NPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR 855
Query: 120 VKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDP 179
+ +W ++ G + P L + GG T +I D
Sbjct: 856 LHVWDLSK-------IGEEQLPEDAEDGPPELLFIHGG--HTAKISDF------------ 972
Query: 180 TGLTNTVSFHPDGTCIA-SGSTDNSIKLWDLRSNV 213
S++P+ I S S DN +++W + N+
Sbjct: 973 -------SWNPNEPWIVCSVSEDNIMQVWQMAENI 1056
>13278
Length = 870
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%)
Frame = +1
Query: 69 IASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQ 128
I S KD + Q T + T+ + TG G + + +LA+ S D TV++W V
Sbjct: 1 IWSMGKDSCIHDLQLTTKEIYTIKWSPTGP--GTSNPNTSLILASASFDSTVRLWEVERG 174
Query: 129 KFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSF 188
TLT HQ V V SPDG+ SG D+ V IW++ + +V +++ G+ V +
Sbjct: 175 LCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNVQTGSLVHSYKGTGGIFE-VCW 351
Query: 189 HPDGTCIASGSTDNSIKLWDLR 210
+ G + + ++D S+ + DLR
Sbjct: 352 NHRGDKVGASASDGSVFVLDLR 417
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Frame = +1
Query: 206 LWDLRSNVLLQHYRAHTGPVTHLSFHPTGN---------FLLSSSLDTTLKVWDLREGQL 256
+W + + + + T + + + PTG L S+S D+T+++W++ G
Sbjct: 1 IWSMGKDSCIHDLQLTTKEIYTIKWSPTGPGTSNPNTSLILASASFDSTVRLWEVERGLC 180
Query: 257 LYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWKTNFDRFLEDYTG 304
L+TL H+ AFSP G Y AS D+ V +W + Y G
Sbjct: 181 LHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNVQTGSLVHSYKG 324
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%)
Frame = +1
Query: 152 LAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRS 211
+ S D TVR+W++ + T +V+F PDG +ASGS D + +W++++
Sbjct: 118 ILASASFDSTVRLWEVERGLCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNVQT 297
Query: 212 NVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLRE 253
L+ Y+ TG + + ++ G+ + +S+ D ++ V DLR+
Sbjct: 298 GSLVHSYKG-TGGIFEVCWNHRGDKVGASASDGSVFVLDLRK 420
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Frame = +1
Query: 57 VYSVAFSPV---------HALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSD 107
+Y++ +SP ++AS S D TVRLW+ L H V V FS D
Sbjct: 58 IYTIKWSPTGPGTSNPNTSLILASASFDSTVRLWEVERGLCLHTLTKHQEPVYSVAFSPD 237
Query: 108 GRMLATCSDDKTVKIWSVATQKFAFTLTG 136
G+ LA+ S DK V IW+V T + G
Sbjct: 238 GKYLASGSFDKCVHIWNVQTGSLVHSYKG 324
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +1
Query: 27 LVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQ 82
L + S D+ V +W + L H+ VYSVAFSP +ASGS D+ V +W
Sbjct: 121 LASASFDSTVRLWEVERGLCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWN 288
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +1
Query: 11 HKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHALIA 70
H++ V SV F+ + K L +GS D CV +WN + + G G++ V ++ +
Sbjct: 199 HQEPVYSVAFSPDGKYLASGSFDKCVHIWNVQTGSLVHSYKG-TGGIFEVCWNHRGDKVG 375
Query: 71 SGSKDRTV 78
+ + D +V
Sbjct: 376 ASASDGSV 399
>15118
Length = 1074
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 7/201 (3%)
Frame = +3
Query: 98 TVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTL---TGHQNWVRCVHISPDGRLAV 154
T + V SS G +A + I+++ + K + H + VR V L +
Sbjct: 63 TAQAVDISSCGNYVAVGYSSGHLDIYNLQSGKHRGSFGDTVAHVSGVRGVAFDAFNCLLI 242
Query: 155 SGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVS---FHPDGTCIASGSTDNSIKLWDLRS 211
+ G D ++ W S+ R ++ +S H D +A D ++ + D+ +
Sbjct: 243 TAGGDCDIKFWRFGSRDRARVLLKELKMSEGISRILLHRDSNMLAVVLEDFTVSVIDVDT 422
Query: 212 NVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTA 271
+++ + H+ +T LSF G +L+++S+D T++ W L G+L+ E A
Sbjct: 423 LRVVRVFSGHSNSITDLSFSGDGRWLITASMDCTVRTWSLVHGRLIDCF-AVEAAVTSLT 599
Query: 272 FSPAGDYFA-SCGADEQVMVW 291
SP+ D+ A S D V +W
Sbjct: 600 MSPSQDFLATSHVGDVGVYLW 662
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 7/198 (3%)
Frame = +3
Query: 17 SVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFA---GHKAGVYSVAFSPVHALIASGS 73
S C N+ +G LD ++N + F H +GV VAF + L+ +
Sbjct: 84 SSCGNYVAVGYSSGHLD----IYNLQSGKHRGSFGDTVAHVSGVRGVAFDAFNCLLITAG 251
Query: 74 KDRTVRLWQPTVEGKSTVLKAHTGTVRGVT---FSSDGRMLATCSDDKTVKIWSVATQKF 130
D ++ W+ ++ VL G++ D MLA +D TV + V T +
Sbjct: 252 GDCDIKFWRFGSRDRARVLLKELKMSEGISRILLHRDSNMLAVVLEDFTVSVIDVDTLRV 431
Query: 131 AFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHP 190
+GH N + + S DGR ++ D TVR W L +++ F +T +++ P
Sbjct: 432 VRVFSGHSNSITDLSFSGDGRWLITASMDCTVRTWSLVHGRLIDCFAVEAAVT-SLTMSP 608
Query: 191 DGTCIASGST-DNSIKLW 207
+A+ D + LW
Sbjct: 609 SQDFLATSHVGDVGVYLW 662
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 4/171 (2%)
Frame = +3
Query: 94 AHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGH---QNWVRCVHISPDG 150
AH VRGV F + +L T D +K W ++ A L + + + D
Sbjct: 186 AHVSGVRGVAFDAFNCLLITAGGDCDIKFWRFGSRDRARVLLKELKMSEGISRILLHRDS 365
Query: 151 RLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLR 210
+ +D TV + D+++ +VVR F + +SF DG + + S D +++ W L
Sbjct: 366 NMLAVVLEDFTVSVIDVDTLRVVRVFSGHSNSITDLSFSGDGRWLITASMDCTVRTWSLV 545
Query: 211 SNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSL-DTTLKVWDLREGQLLYTL 260
L+ + A VT L+ P+ +FL +S + D + +W Q LY
Sbjct: 546 HGRLIDCF-AVEAAVTSLTMSPSQDFLATSHVGDVGVYLW---ANQTLYXF 686
>10162
Length = 1629
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Frame = +3
Query: 141 VRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTF--------EDPTGLTNTVSFHPDG 192
+ CV S D L +SG D T ++++++S K+ F +D +V+F P
Sbjct: 378 ILCVDCSADNALIMSGCADATAKVFNVSSGKLXSAFNCAASQDSQDKDNSVESVAFCPVS 557
Query: 193 TCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLR 252
A+ + S+++WDL ++V +H H V L + + L ++ LD ++VWD R
Sbjct: 558 PYAATATNSGSVQVWDLPTSVA-RHSFQHPEGVCKLQWSSSTALLYTACLDGVMRVWDAR 734
Query: 253 EGQLLYTLHGH 263
G L GH
Sbjct: 735 SGASKAVLTGH 767
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 75/210 (35%), Gaps = 38/210 (18%)
Frame = +3
Query: 120 VKIWSVATQKFAFT--LTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTF- 176
V +W V +Q ++ L H C I P+G+ G D V++WDL + V T+
Sbjct: 99 VWLWQVPSQDYSKMKMLQSHGQPSLCGKILPNGKYVCVGYSDGVVKLWDLKTGTAVHTWQ 278
Query: 177 -----EDPTGLTNT----------------------VSFHPDGTCIASGSTDNSIKLWDL 209
E+ N+ V D I SG D + K++++
Sbjct: 279 HSVMPEEEMPERNSSDEEDGEEVEVEREEDTVAILCVDCSADNALIMSGCADATAKVFNV 458
Query: 210 RSNVLLQHYRAHT--------GPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLH 261
S L + V ++F P + +++ +++VWDL ++
Sbjct: 459 SSGKLXSAFNCAASQDSQDKDNSVESVAFCPVSPYAATATNSGSVQVWDLPTSVARHSFQ 638
Query: 262 GHEGATNGTAFSPAGDYFASCGADEQVMVW 291
EG S + +C D + VW
Sbjct: 639 HPEGVCKLQWSSSTALLYTAC-LDGVMRVW 725
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 60/161 (37%), Gaps = 10/161 (6%)
Frame = +3
Query: 56 GVYSVAFSPVHALIASGSKDRTVRLWQPTVEGKSTVLKAHT--------GTVRGVTFSSD 107
+ V S +ALI SG D T +++ + + +V V F
Sbjct: 375 AILCVDCSADNALIMSGCADATAKVFNVSSGKLXSAFNCAASQDSQDKDNSVESVAFCPV 554
Query: 108 GRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDL 167
AT ++ +V++W + T + H V + S L + D +R+WD
Sbjct: 555 SPYAATATNSGSVQVWDLPTSVARHSFQ-HPEGVCKLQWSSSTALLYTACLDGVMRVWDA 731
Query: 168 NS--KKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKL 206
S K V T DGTC+ SGS D + ++
Sbjct: 732 RSGASKAVLTGHARNSCILDFDVTRDGTCLVSGSEDGTARV 854
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +3
Query: 186 VSFHPDGTCIASGSTDNSIKLWDLRSNVL--LQHYRAHTGPVTHLSFHPTGNFLLSSSLD 243
+ +H + +G+ + LW + S ++ ++H P P G ++ D
Sbjct: 45 LQWHGGAHVLLAGTQGGEVWLWQVPSQDYSKMKMLQSHGQPSLCGKILPNGKYVCVGYSD 224
Query: 244 TTLKVWDLREGQLLYT 259
+K+WDL+ G ++T
Sbjct: 225 GVVKLWDLKTGTAVHT 272
>01768
Length = 1424
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 88/173 (50%), Gaps = 16/173 (9%)
Frame = +3
Query: 53 HKAGVYSVAFSPV-HALIASGSKDRTVRLWQPTVEG---KSTVLKAHTGTVRGVTFS-SD 107
H +++ +SP + +G + + QP+ G + + AHT +V V +S ++
Sbjct: 696 HTTEGFAIDWSPAAKGWLVTGDCTGAIYISQPSSSGWTTEKSSYAAHTDSVEDVQWSPNE 875
Query: 108 GRMLATCSDDKTVKIWSVATQKF-AFTLT---GHQNWVRCVHISP-DGRLAVSGGDDRTV 162
G + A+CS D+T++IW+ + A LT H + ++ +P + L SGGDD +
Sbjct: 876 GNVFASCSVDRTLRIWNTQQKPSKANVLTVPEAHSRDINVINWNPIEKHLLASGGDDGII 1055
Query: 163 RIWDL---NSKKVV--RTFEDPTGLTNTVSFHP-DGTCIASGSTDNSIKLWDL 209
+IWDL +K V +F+ + ++ ++P D + +A+ D+ I +WD
Sbjct: 1056KIWDLRMFRNKPVSAQASFKLHSQPVTSLEWNPQDSSVLAASGEDDQITIWDF 1214
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 12/141 (8%)
Frame = +3
Query: 123 WSVATQKFAFTLTGHQNWVRCVHISP-DGRLAVSGGDDRTVRIWDLNSK----KVVRTFE 177
W+ +A H + V V SP +G + S DRT+RIW+ K V+ E
Sbjct: 804 WTTEKSSYA----AHTDSVEDVQWSPNEGNVFASCSVDRTLRIWNTQQKPSKANVLTVPE 971
Query: 178 DPTGLTNTVSFHP-DGTCIASGSTDNSIKLWDLR----SNVLLQ-HYRAHTGPVTHLSFH 231
+ N ++++P + +ASG D IK+WDLR V Q ++ H+ PVT L ++
Sbjct: 972 AHSRDINVINWNPIEKHLLASGGDDGIIKIWDLRMFRNKPVSAQASFKLHSQPVTSLEWN 1151
Query: 232 PTGNFLLSSS-LDTTLKVWDL 251
P + +L++S D + +WD
Sbjct: 1152PQDSSVLAASGEDDQITIWDF 1214
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Frame = +3
Query: 191 DGTCIASGSTDNSIKLWDL-----RSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDT- 244
+G AS S D ++++W+ ++NVL AH+ + ++++P LL+S D
Sbjct: 873 EGNVFASCSVDRTLRIWNTQQKPSKANVLTVP-EAHSRDINVINWNPIEKHLLASGGDDG 1049
Query: 245 TLKVWDLR-------EGQLLYTLHGHEGATNGTAFSPA-GDYFASCGADEQVMVWKTNFD 296
+K+WDLR Q + LH ++P A+ G D+Q+ +W + +
Sbjct: 1050IIKIWDLRMFRNKPVSAQASFKLHSQ--PVTSLEWNPQDSSVLAASGEDDQITIWDFSVE 1223
Query: 297 R 297
R
Sbjct: 1224R 1226
>31474
Length = 403
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Frame = -3
Query: 168 NSKKVVRTFEDPTGLTN------TVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYR-- 219
++K + T E+ L+ V+++P GT +AS +D IK+W + +
Sbjct: 359 HAKMAMATLEEVCCLSAHDEHAWCVAWNPTGTLLASCGSDKIIKIWGKEGDNWVCKSTLT 180
Query: 220 -AHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQL--LYTLHGHEGATNGTAFS 273
AHT V L + P GN+L S+S D T VW + G+ + TL GHE A++
Sbjct: 179 DAHTRTVRSLGWSPCGNYLSSASFDATTAVWSRKGGEFECIATLEGHENEVKAVAWA 9
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Frame = -3
Query: 50 FAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQPTVEG---KSTVLKAHTGTVRGVTFSS 106
+ H + VA++P L+AS D+ +++W + KST+ AHT TVR + +S
Sbjct: 317 LSAHDEHAWCVAWNPTGTLLASCGSDKIIKIWGKEGDNWVCKSTLTDAHTRTVRSLGWSP 138
Query: 107 DGRMLATCSDDKTVKIWSVATQKFAF--TLTGHQNWVRCV 144
G L++ S D T +WS +F TL GH+N V+ V
Sbjct: 137 CGNYLSSASFDATTAVWSRKGGEFECIATLEGHENEVKAV 18
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = -3
Query: 91 VLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAF--TLT-GHQNWVRCVHIS 147
L AH V ++ G +LA+C DK +KIW + TLT H VR + S
Sbjct: 320 CLSAHDEHAWCVAWNPTGTLLASCGSDKIIKIWGKEGDNWVCKSTLTDAHTRTVRSLGWS 141
Query: 148 PDGRLAVSGGDDRTVRIW 165
P G S D T +W
Sbjct: 140 PCGNYLSSASFDATTAVW 87
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Frame = -3
Query: 220 AHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQ---LLYTL-HGHEGATNGTAFSPA 275
AH ++++PTG L S D +K+W +EG TL H +SP
Sbjct: 311 AHDEHAWCVAWNPTGTLLASCGSDKIIKIWG-KEGDNWVCKSTLTDAHTRTVRSLGWSPC 135
Query: 276 GDYFASCGADEQVMVWKTNFDRF 298
G+Y +S D VW F
Sbjct: 134 GNYLSSASFDATTAVWSRKGGEF 66
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -3
Query: 255 QLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWKTNFDRFLEDYTGVSVAKQTRTD 314
+ + L H+ A++P G ASCG+D+ + +W D + V K T TD
Sbjct: 332 EEVCCLSAHDEHAWCVAWNPTGTLLASCGSDKIIKIWGKEGDNW--------VCKSTLTD 177
Query: 315 P 315
Sbjct: 176 A 174
>26939
Length = 388
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +2
Query: 150 GRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDL 209
G+ VS DD+T+R+WDL +K+ ++T ++ FH + SGS D ++K+W+
Sbjct: 2 GKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWEC 181
Query: 210 R 210
R
Sbjct: 182 R 184
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +2
Query: 192 GTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDL 251
G + S S D +I++WDLR+ ++ AH T + FH +++S S+D T+KVW+
Sbjct: 2 GKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWEC 181
Query: 252 R 252
R
Sbjct: 182 R 184
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +2
Query: 234 GNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWK 292
G +L+S+S D T++VWDLR + + TL+ H+ F A Y S D+ V VW+
Sbjct: 2 GKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 178
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = +2
Query: 108 GRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWD 166
G+ L + SDDKT+++W + ++ TL HQ++ + +SG D+TV++W+
Sbjct: 2 GKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 178
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 25 KQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQ 82
K LV+ S D + VW+ + + H+ S+ F H + SGS D+TV++W+
Sbjct: 5 KYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 178
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 69 IASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWS 124
+ S S D+T+R+W + L AH + F + + S D+TVK+W
Sbjct: 11 LVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 178
>26107
Length = 1338
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 120/325 (36%), Gaps = 23/325 (7%)
Frame = -3
Query: 2 PTLERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVA 61
PT+ R + H +AV + N Q +T S D V +W+ + + F GHK V SVA
Sbjct: 1114 PTVHR-WXAHNNAVFDYSWISNDSQCLTASGDQTVALWDVETTTKVTTFIGHKCSVRSVA 938
Query: 62 FSPVH-ALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTV 120
P A ASG++D + LW V K V V S + K
Sbjct: 937 SCPSSPAQCASGARDGHIMLWDSRVNKKRE--HQPCSQVHQVCPQSGHQSKPA----KHR 776
Query: 121 KIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNS---------KK 171
+I A K Q V CV D + SG +D V++WD
Sbjct: 775 RIHRAAGPKGVMDT---QQSVTCVLYQTDNLIISSGANDGCVKMWDTRKWYTNTTTSLPV 605
Query: 172 VVRTFEDPTGLTN-----TVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGP-- 224
V TF+ P + T+ P + + TDN + + L + G
Sbjct: 604 PVHTFDYPGHMRRLKGIVTMCMDPWKSQLFVSYTDNKVYRYQLAGQYREPQEYVYAGHRN 425
Query: 225 ---VTHLSFHPTGNFLLSSSLDTTLKVWDL-REGQLLYTLHGH-EGATNGTAFSPAGDYF 279
+ P G +LLS S T +W++ + + L GH E + S
Sbjct: 424 DTFFVRCAISPDGKYLLSGSGRNTGVIWEVDKPNKRPLFLIGHTEDVSAVDWCSTDVCKL 245
Query: 280 ASCGADEQVMVWKTNF-DRFLEDYT 303
A+ D + +W+ + +R ED T
Sbjct: 244 ATVSDDRSLRIWRPDARERHTEDPT 170
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 98/283 (34%), Gaps = 54/283 (19%)
Frame = -3
Query: 66 HALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSV 125
HA G TV W AH V ++ S+ T S D+TV +W V
Sbjct: 1144 HAAWRYGQDSPTVHRW-----------XAHNNAVFDYSWISNDSQCLTASGDQTVALWDV 998
Query: 126 ATQKFAFTLTGHQNWVRCVHISPDGRL-AVSGGDDRTVRIWD--LNSKKV---------- 172
T T GH+ VR V P SG D + +WD +N K+
Sbjct: 997 ETTTKVTTFIGHKCSVRSVASCPSSPAQCASGARDGHIMLWDSRVNKKREHQPCSQVHQV 818
Query: 173 ---------------VRTFEDPTGLTNT------VSFHPDGTCIASGSTDNSIKLWDLR- 210
+ P G+ +T V + D I+SG+ D +K+WD R
Sbjct: 817 CPQSGHQSKPAKHRRIHRAAGPKGVMDTQQSVTCVLYQTDNLIISSGANDGCVKMWDTRK 638
Query: 211 --SNVLLQ------------HYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDL----R 252
+N H R G VT + P + L S D + + L R
Sbjct: 637 WYTNTTTSLPVPVHTFDYPGHMRRLKGIVT-MCMDPWKSQLFVSYTDNKVYRYQLAGQYR 461
Query: 253 EGQ-LLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWKTN 294
E Q +Y H ++ A SP G Y S ++W+ +
Sbjct: 460 EPQEYVYAGHRNDTFFVRCAISPDGKYLLSGSGRNTGVIWEVD 332
>35607
Length = 475
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%)
Frame = +2
Query: 190 PDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVW 249
PDGT + +G DN+++ WDLR LQ + + + L + PTG++L + ++V
Sbjct: 8 PDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FSSQIFSLGYCPTGDWLAVGMESSNVEVL 184
Query: 250 DLREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWKTNF 295
+ Y LH HE F+ G +F S G D + W+T +
Sbjct: 185 HHSKPD-KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 319
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 2/158 (1%)
Frame = +2
Query: 148 PDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLW 207
PDG +GG D TVR WDL + ++ D + ++ + P G +A G +++++
Sbjct: 8 PDGTKLWTGGLDNTVRSWDLREGRQLQQ-HDFSSQIFSLGYCPTGDWLAVGMESSNVEVL 184
Query: 208 DLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGAT 267
S H V L F G + +S+ D L W G ++ E ++
Sbjct: 185 H-HSKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF--QSKESSS 355
Query: 268 NGTAFSPAGD-YFASCGADEQVMVWKTNF-DRFLEDYT 303
+ A D Y + D++ +++ F DR +YT
Sbjct: 356 VLSCDIAADDKYIVTGSGDKKATLYEVIF*DRCSRNYT 469
>21105
Length = 650
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Frame = +1
Query: 145 HISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSI 204
H P + ++ +DR +R +D N+ K++ +++ P+G + SGS D SI
Sbjct: 85 HQHPTMPITITAHEDRHIRFFDNNTGKLIHAMVAHLDSVTSLAVDPNGLYLLSGSHDCSI 264
Query: 205 KLWDLRSNVLLQHYRAHTGP----VTHLSFHPTGNFLLSSSLDTTLKVW 249
+LW+L S +Q +H + ++FHP ++ S+ D KV+
Sbjct: 265 RLWNLDSKTCVQEITSHRKKFDESIHDVAFHPQKPYIASAGADALAKVF 411
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Frame = +1
Query: 189 HPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKV 248
HP + D I+ +D + L+ AH VT L+ P G +LLS S D ++++
Sbjct: 91 HPTMPITITAHEDRHIRFFDNNTGKLIHAMVAHLDSVTSLAVDPNGLYLLSGSHDCSIRL 270
Query: 249 WDLREGQLLYTLHGH----EGATNGTAFSPAGDYFASCGADEQVMVW 291
W+L + + H + + + AF P Y AS GAD V+
Sbjct: 271 WNLDSKTCVQEITSHRKKFDESIHDVAFHPQKPYIASAGADALAKVF 411
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Frame = +1
Query: 113 TCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKV 172
T +D+ ++ + T K + H + V + + P+G +SG D ++R+W+L+SK
Sbjct: 115 TAHEDRHIRFFDNNTGKLIHAMVAHLDSVTSLAVDPNGLYLLSGSHDCSIRLWNLDSKTC 294
Query: 173 V-------RTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLW 207
V + F++ + V+FHP IAS D K++
Sbjct: 295 VQEITSHRKKFDES---IHDVAFHPQKPYIASAGADALAKVF 411
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Frame = +1
Query: 4 LERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHK----AGVYS 59
L + H D+VTS+ + N L++GS D + +WN + H+ ++
Sbjct: 166 LIHAMVAHLDSVTSLAVDPNGLYLLSGSHDCSIRLWNLDSKTCVQEITSHRKKFDESIHD 345
Query: 60 VAFSPVHALIASGSKDRTVRLW---QPTVE 86
VAF P IAS D +++ QP ++
Sbjct: 346 VAFHPQKPYIASAGADALAKVFV*HQPPLD 435
Score = 31.2 bits (69), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/106 (17%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
Frame = +1
Query: 64 PVHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIW 123
P + + +DR +R + + AH +V + +G L + S D ++++W
Sbjct: 94 PTMPITITAHEDRHIRFFDNNTGKLIHAMVAHLDSVTSLAVDPNGLYLLSGSHDCSIRLW 273
Query: 124 SVATQKFAFTLTGHQNW----VRCVHISPDGRLAVSGGDDRTVRIW 165
++ ++ +T H+ + V P S G D +++
Sbjct: 274 NLDSKTCVQEITSHRKKFDESIHDVAFHPQKPYIASAGADALAKVF 411
>01805
Length = 2124
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 8/179 (4%)
Frame = -1
Query: 6 RSFRGHKDAVTSVCFNHNMKQ-LVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSP 64
S GH AV + +N N + L + S D V +W+ A F H V + P
Sbjct: 594 ESVTGHTQAVLDLSWNRNARHVLASASADTTVALWDLSEGKMAMNFTQHSREVQCCNWHP 415
Query: 65 VHA-LIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSS-----DGRMLATCSDDK 118
+ +GS D TV++ V+ +S + TV G + + L C+D
Sbjct: 414 QEEQTLLTGSFDNTVKV----VDCRSAETCHKSWTVEGEVEKAVWNHHNPLQLLACTDKG 247
Query: 119 TVKIWSVATQKFAFTLTGHQNWVRCVHISPD-GRLAVSGGDDRTVRIWDLNSKKVVRTF 176
V + + +K F++ H + V V +S L ++ +D+T+++WD+ K F
Sbjct: 246 MVYCFDIRHEKPVFSVGAHSSCVTGVCLSSQIPGLMITTSEDKTMKVWDIQDDKPTHVF 70
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 81/165 (49%), Gaps = 4/165 (2%)
Frame = -1
Query: 95 HTGTVRGVTFSSDGR-MLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISP-DGRL 152
HT V ++++ + R +LA+ S D TV +W ++ K A T H V+C + P + +
Sbjct: 579 HTQAVLDLSWNRNARHVLASASADTTVALWDLSEGKMAMNFTQHSREVQCCNWHPQEEQT 400
Query: 153 AVSGGDDRTVRIWDLNSKKVV-RTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRS 211
++G D TV++ D S + +++ + V H + + + + + +D+R
Sbjct: 399 LLTGSFDNTVKVVDCRSAETCHKSWTVEGEVEKAVWNHHNPLQLLACTDKGMVYCFDIRH 220
Query: 212 NVLLQHYRAHTGPVTHLSFHP-TGNFLLSSSLDTTLKVWDLREGQ 255
+ AH+ VT + ++++S D T+KVWD+++ +
Sbjct: 219 EKPVFSVGAHSSCVTGVCLSSQIPGLMITTSEDKTMKVWDIQDDK 85
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 21/104 (20%)
Frame = -1
Query: 192 GTCIASGSTDNSIKLWDL--------------------RSNVLLQHYRAHTGPVTHLSFH 231
G +A GS + I++WDL + + HT V LS++
Sbjct: 726 GNFVAIGSMEPVIEIWDLDIMESVGPTLTLGSKPKKTKKKMKQKESVTGHTQAVLDLSWN 547
Query: 232 PTGNFLLSS-SLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSP 274
+L+S S DTT+ +WDL EG++ H + P
Sbjct: 546 RNARHVLASASADTTVALWDLSEGKMAMNFTQHSREVQCCNWHP 415
>15337
Length = 860
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%)
Frame = -1
Query: 96 TGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVS 155
TG + FS R LA D +++++ + + T+ + + CV SPDG+ V+
Sbjct: 329 TGAISEFAFSPCSRYLAVVGQDGHLRVFNYNSMELIGTMKSYFGGLLCVCWSPDGKYIVT 150
Query: 156 GGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTD 201
GG+D V +W + K+VV N V+F TC+A D
Sbjct: 149 GGEDDLVTVWSFHEKRVVCRGHGHKSWVNVVAFDIH-TCLACDDED 15
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%)
Frame = -1
Query: 48 FRFAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSD 107
+R+ + AFSP +A +D +R++ +K++ G + V +S D
Sbjct: 347 YRWVVGTGAISEFAFSPCSRYLAVVGQDGHLRVFNYNSMELIGTMKSYFGGLLCVCWSPD 168
Query: 108 GRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCV 144
G+ + T +D V +WS ++ GH++WV V
Sbjct: 167 GKYIVTGGEDDLVTVWSFHEKRVVCRGHGHKSWVNVV 57
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%)
Frame = -1
Query: 180 TGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLS 239
TG + +F P +A D +++++ S L+ +++ G + + + P G ++++
Sbjct: 329 TGAISEFAFSPCSRYLAVVGQDGHLRVFNYNSMELIGTMKSYFGGLLCVCWSPDGKYIVT 150
Query: 240 SSLDTTLKVWDLREGQLLYTLHGHEGATNGTAF 272
D + VW E +++ HGH+ N AF
Sbjct: 149 GGEDDLVTVWSFHEKRVVCRGHGHKSWVNVVAF 51
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = -1
Query: 7 SFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVH 66
+ + + + VC++ + K +VTG D+ V VW+F + R GHK+ V VAF +H
Sbjct: 218 TMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFHEKRVVCRGHGHKSWVNVVAFD-IH 42
Query: 67 ALIASGSKD 75
+A +D
Sbjct: 41 TCLACDDED 15
>31864
Length = 545
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 66/154 (42%), Gaps = 18/154 (11%)
Frame = +2
Query: 165 WDL-NSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTG 223
WD+ +KVV + D TG N + DGT + S D + KL+D S + L+ Y+
Sbjct: 2 WDVRKGQKVVDSGVDHTGGINDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTER- 178
Query: 224 PVTHLSFHPTGNFLLSSSLDTTLKV---------WDLREGQLLYT-----LHGHEGATNG 269
PV + P + ++ ++V +D R L+Y L GH G N
Sbjct: 179 PVNSAAISPILDHVVLGGGQDAMEVTTTSTKAGKFDSRFFHLIYEEEFARLKGHFGPINS 358
Query: 270 TAFSPAGDYFASCGADEQVMVW---KTNFDRFLE 300
AF P G +AS G D V V T F+ E
Sbjct: 359 LAFHPDGKSYASGGEDGFVRVKSFDSTYFENIFE 460
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2
Query: 125 VATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFE 177
+ ++FA L GH + + PDG+ SGG+D VR+ +S FE
Sbjct: 305 IYEEEFA-RLKGHFGPINSLAFHPDGKSYASGGEDGFVRVKSFDSTYFENIFE 460
>18981
Length = 407
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%)
Frame = -2
Query: 110 MLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNS 169
M+ + + D+T+++W + TL GH + V CV I GR VSG D+T+ +W++++
Sbjct: 382 MIISAATDRTLRVWCLKNTCLLHTLRGHNDDVECVCIY--GRRVVSGSWDKTLIVWEVDT 209
Query: 170 KKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLL 215
+ V T V F +G + SGS D ++ W L + L
Sbjct: 208 GRPVHQLHGHTEAITAVQF-DEGKAV-SGSADGDVRTWALDTGQCL 77
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%)
Frame = -2
Query: 195 IASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREG 254
I S +TD ++++W L++ LL R H V + + G ++S S D TL VW++ G
Sbjct: 379 IISAATDRTLRVWCLKNTCLLHTLRGHNDDVECVCIY--GRRVVSGSWDKTLIVWEVDTG 206
Query: 255 QLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWKTNFDRFL 299
+ ++ LHGH A F S AD V W + + L
Sbjct: 205 RPVHQLHGHTEAITAVQFDEGKAVSGS--ADGDVRTWALDTGQCL 77
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%)
Frame = -2
Query: 68 LIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVAT 127
+I S + DRT+R+W L+ H V V GR + + S DKT+ +W V T
Sbjct: 382 MIISAATDRTLRVWCLKNTCLLHTLRGHNDDVECVCIY--GRRVVSGSWDKTLIVWEVDT 209
Query: 128 QKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTF 176
+ L GH + V D AVSG D VR W L++ + + T
Sbjct: 208 GRPVHQLHGHTEAITAVQF--DEGKAVSGSADGDVRTWALDTGQCLLTM 68
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%)
Frame = -2
Query: 145 HISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSI 204
HI + +S DRT+R+W L + ++ T V + G + SGS D ++
Sbjct: 403 HIHLLDNMIISAATDRTLRVWCLKNTCLLHTLRGHNDDVECVCIY--GRRVVSGSWDKTL 230
Query: 205 KLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTL 260
+W++ + + HT +T + F +S S D ++ W L GQ L T+
Sbjct: 229 IVWEVDTGRPVHQLHGHTEAITAVQFDE--GKAVSGSADGDVRTWALDTGQCLLTM 68
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%)
Frame = -2
Query: 1 DPTLERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSV 60
+ L + RGH D V VC +++V+GS D ++VW + GH + +V
Sbjct: 331 NTCLLHTLRGHNDDVECVCIYG--RRVVSGSWDKTLIVWEVDTGRPVHQLHGHTEAITAV 158
Query: 61 AFSPVHALIASGSKDRTVRLW 81
F A+ SGS D VR W
Sbjct: 157 QFDEGKAV--SGSADGDVRTW 101
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = -2
Query: 230 FHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVM 289
H N ++S++ D TL+VW L+ LL+TL GH G S D+ ++
Sbjct: 400 IHLLDNMIISAATDRTLRVWCLKNTCLLHTLRGHNDDVECVCIY--GRRVVSGSWDKTLI 227
Query: 290 VWKTNFDR 297
VW+ + R
Sbjct: 226 VWEVDTGR 203
>14555
Length = 627
Score = 40.4 bits (93), Expect(2) = 9e-07, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -2
Query: 171 KVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHT 222
+ V+ FE N V F+P G A+GS D + +L+DLR++ + YR +
Sbjct: 626 ECVQMFEGHEADINCVRFYPSGDAFATGSDDATCRLFDLRADREVNCYRKES 471
Score = 30.0 bits (66), Expect(2) = 9e-07, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = -3
Query: 219 RAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGDY 278
+A + T F + L + D T+ VWD +G L+GH+ + SP G
Sbjct: 475 KASSLAATLWIFLSVVDCCLGVTNDYTVNVWDALKGMRSTILYGHDNRVSCLRISPDGTS 296
Query: 279 FASCGADEQVMVW 291
+ D + +W
Sbjct: 295 LCTGSWDYTLRIW 257
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = -3
Query: 115 SDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIW 165
++D TV +W + L GH N V C+ ISPDG +G D T+RIW
Sbjct: 409 TNDYTVNVWDALKGMRSTILYGHDNRVSCLRISPDGTSLCTGSWDYTLRIW 257
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = -2
Query: 134 LTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGL--TNTVSFHPD 191
GH+ + CV P G +G DD T R++DL + + V + + + N V F
Sbjct: 611 FEGHEADINCVRFYPSGDAFATGSDDATCRLFDLRADREVNCYRKESIIFGCNAVDFSVS 432
Query: 192 GTCIASG 198
G + G
Sbjct: 431 GRLLFGG 411
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -2
Query: 214 LLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLR 252
+Q + H + + F+P+G+ + S D T +++DLR
Sbjct: 623 CVQMFEGHEADINCVRFYPSGDAFATGSDDATCRLFDLR 507
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 33 DNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHALIASGSKDRTVRLW 81
D V VW+ +R+ GH V + SP + +GS D T+R+W
Sbjct: 403 DYTVNVWDALKGMRSTILYGHDNRVSCLRISPDGTSLCTGSWDYTLRIW 257
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -2
Query: 255 QLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWKTNFDRFLEDYTGVSV 307
+ + GHE N F P+GD FA+ D ++ DR + Y S+
Sbjct: 626 ECVQMFEGHEADINCVRFYPSGDAFATGSDDATCRLFDLRADREVNCYRKESI 468
>25880
Length = 423
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 11 HKDAVTSVCFNHNMKQLVTGSLDNCVMVWNF-KPQLRAFRFAGHKAGVYSVAFSPVHALI 69
HK V SV F+++ + +VTGS + V V+N +P + GH + AL
Sbjct: 53 HKHIVKSVAFDNSSENIVTGSNEKLVRVFNLEQPDAEPELYGGHTGAIK-------RALY 211
Query: 70 ASGSKDRTVRLWQPTV 85
ASGS+D T+RLWQ TV
Sbjct: 212 ASGSEDGTLRLWQTTV 259
>19863
Length = 502
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +1
Query: 191 DGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWD 250
DG + SGS+D SI +WD+ + V + H G V + F +LLS S D T+++W+
Sbjct: 4 DGLQLVSGSSDMSIVVWDVENGVQKLRLQGHAGWVNDVHFSQDQCWLLSCSNDNTVRIWN 183
Query: 251 LREGQLLYTLHGHEGAT--NGTAFSPAGDYFA 280
+ E + + H+ A T S G F+
Sbjct: 184 IEESDQIPIVMEHKRAQGLKVTKCSKCGKPFS 279
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = +1
Query: 26 QLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQPTV 85
QLV+GS D ++VW+ + ++ R GH V V FS + S S D TVR+W
Sbjct: 13 QLVSGSSDMSIVVWDVENGVQKLRLQGHAGWVNDVHFSQDQCWLLSCSNDNTVRIWNIEE 192
Query: 86 EGKSTVLKAH 95
+ ++ H
Sbjct: 193SDQIPIVMEH 222
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +1
Query: 107 DGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWD 166
DG L + S D ++ +W V L GH WV VH S D +S +D TVRIW+
Sbjct: 4 DGLQLVSGSSDMSIVVWDVENGVQKLRLQGHAGWVNDVHFSQDQCWLLSCSNDNTVRIWN 183
Query: 167 L 167
+
Sbjct: 184 I 186
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +1
Query: 149 DGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWD 208
DG VSG D ++ +WD+ + + G N V F D + S S DN++++W+
Sbjct: 4 DGLQLVSGSSDMSIVVWDVENGVQKLRLQGHAGWVNDVHFSQDQCWLLSCSNDNTVRIWN 183
Query: 209 LRSN----VLLQHYRAHTGPVTHLS 229
+ + ++++H RA VT S
Sbjct: 184 IEESDQIPIVMEHKRAQGLKVTKCS 258
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +1
Query: 69 IASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSV 125
+ SGS D ++ +W + L+ H G V V FS D L +CS+D TV+IW++
Sbjct: 16 LVSGSSDMSIVVWDVENGVQKLRLQGHAGWVNDVHFSQDQCWLLSCSNDNTVRIWNI 186
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +1
Query: 237 LLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVW 291
L+S S D ++ VWD+ G L GH G N FS + SC D V +W
Sbjct: 16 LVSGSSDMSIVVWDVENGVQKLRLQGHAGWVNDVHFSQDQCWLLSCSNDNTVRIW 180
>37180
Length = 681
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +1
Query: 186 VSFHPDGTCIASGSTDNSIKLWDLRSNVLLQH-YRAHTGPVTHLSFHPTGNFLLSSSLDT 244
V HP + + S D + +LWD R + LL + ++ HT PVT F +G+ ++S S D
Sbjct: 37 VHAHPTQRLVVTSSKDMTFRLWDFRDSALLVNVFQGHTQPVTSAVF-ASGDKVVSGSDDR 213
Query: 245 TLKVWDLR 252
T++VWD+R
Sbjct: 214 TVRVWDMR 237
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 134 LTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDL-NSKKVVRTFEDPTGLTNTVSFHPDG 192
L GH + VH P RL V+ D T R+WD +S +V F+ T + F G
Sbjct: 7 LNGHDQELSDVHAHPTQRLVVTSSKDMTFRLWDFRDSALLVNVFQGHTQPVTSAVF-ASG 183
Query: 193 TCIASGSTDNSIKLWDLRS 211
+ SGS D ++++WD+R+
Sbjct: 184 DKVVSGSDDRTVRVWDMRN 240
Score = 42.0 bits (97), Expect(2) = 5e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 52 GHKAGVYSVAFSPVHALIASGSKDRTVRLWQPTVEG-KSTVLKAHTGTVRGVTFSSDGRM 110
GH + V P L+ + SKD T RLW V + HT V F+S G
Sbjct: 13 GHDQELSDVHAHPTQRLVVTSSKDMTFRLWDFRDSALLVNVFQGHTQPVTSAVFAS-GDK 189
Query: 111 LATCSDDKTVKIWSVATQK 129
+ + SDD+TV++W + +
Sbjct: 190 VVSGSDDRTVRVWDMRNMR 246
Score = 22.3 bits (46), Expect(2) = 5e-05, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 144 VHISPDGRLAVSGGDDRTVRIWDLNSKKVVR 174
+ +SP D+R VR++D+N ++ R
Sbjct: 297 ISVSPSLNTIAIPHDNRHVRLYDINGVRIGR 389
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 221 HTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTL-HGHEGATNGTAFSPAGDYF 279
H ++ + HPT +++SS D T ++WD R+ LL + GH F+ +GD
Sbjct: 16 HDQELSDVHAHPTQRLVVTSSKDMTFRLWDFRDSALLVNVFQGHTQPVTSAVFA-SGDKV 192
Query: 280 ASCGADEQVMVW 291
S D V VW
Sbjct: 193 VSGSDDRTVRVW 228
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 91 VLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTL-TGHQNWVRCVHISPD 149
VL H + V R++ T S D T ++W + GH V +
Sbjct: 4 VLNGHDQELSDVHAHPTQRLVVTSSKDMTFRLWDFRDSALLVNVFQGHTQPVTSA-VFAS 180
Query: 150 GRLAVSGGDDRTVRIWDLNSKK 171
G VSG DDRTVR+WD+ + +
Sbjct: 181 GDKVVSGSDDRTVRVWDMRNMR 246
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 8 FRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQ-LRAFRFAGHKAGVYSVAFSPVH 66
GH ++ V + + +VT S D +W+F+ L F GH V S F+
Sbjct: 7 LNGHDQELSDVHAHPTQRLVVTSSKDMTFRLWDFRDSALLVNVFQGHTQPVTSAVFASGD 186
Query: 67 ALIASGSKDRTVRLW 81
++ SGS DRTVR+W
Sbjct: 187KVV-SGSDDRTVRVW 228
>27270
Length = 1078
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Frame = +2
Query: 67 ALIASGSKDRTVRLWQPTVEGKSTVL-KAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSV 125
A++A GS D +V L+ + +L K H+ V + + +DGR L + S D V W+V
Sbjct: 182 AVVAVGSADGSVGLYSVETHTYTHMLNKGHSKAVTDMCWRADGRTLYSSSLDGHVIGWNV 361
Query: 126 AT----QKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTF 176
T +K+ T +G + V CV + RL + D T+++WDL +K V++ F
Sbjct: 362 NTLHMIEKWKAT-SGRHHGVHCVCLCSSSRLLTA---DHTIKMWDLTTKNVLQEF 514
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = +2
Query: 9 RGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRF---AGHKAGVYSVAFSPV 65
+GH AVT +C+ + + L + SLD V+ WN ++ +G GV+ V
Sbjct: 263 KGHSKAVTDMCWRADGRTLYSSSLDGHVIGWNVNTLHMIEKWKATSGRHHGVHCVCLCSS 442
Query: 66 HALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTV 99
L+ + D T+++W T + H+ V
Sbjct: 443 SRLLTA---DHTIKMWDLTTKNVLQEFSGHSTEV 535
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 1/117 (0%)
Frame = +2
Query: 191 DGTCIASGSTDNSIKLWDLRSNVLLQHY-RAHTGPVTHLSFHPTGNFLLSSSLDTTLKVW 249
D +A GS D S+ L+ + ++ + H+ VT + + G L SSSLD + W
Sbjct: 176 DSAVVAVGSADGSVGLYSVETHTYTHMLNKGHSKAVTDMCWRADGRTLYSSSLDGHVIGW 355
Query: 250 DLREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWKTNFDRFLEDYTGVS 306
++ ++ G +G AD + +W L++++G S
Sbjct: 356 NVNTLHMIEKWKATSGRHHGVHCVCLCSSSRLLTADHTIKMWDLTTKNVLQEFSGHS 526
>15972
Length = 1069
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +3
Query: 218 YRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGD 277
+ H GPV HL+ HP+G L+ S D TL++W+ G++ + + E A ++P G
Sbjct: 225 FSGHKGPVRHLAVHPSGKLTLTVSQDRTLRLWNNMNGRIAFISNMKEAA-ESVRWAPGGL 401
Query: 278 YF 279
Y+
Sbjct: 402 YY 407
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 48/104 (46%)
Frame = +3
Query: 95 HTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAV 154
H G VR + G++ T S D+T+++W+ + AF ++ + V +P G V
Sbjct: 234 HKGPVRHLAVHPSGKLTLTVSQDRTLRLWNNMNGRIAF-ISNMKEAAESVRWAPGGLYYV 410
Query: 155 SGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASG 198
+ ++ + SK ++R+ D + N+V F D + G
Sbjct: 411 VAFRSH-LDVYSVESKGLLRSI-DTSQTVNSVGFVTDTVLVYGG 536
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 133 TLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWD 166
T +GH+ VR + + P G+L ++ DRT+R+W+
Sbjct: 222 TFSGHKGPVRHLAVHPSGKLTLTVSQDRTLRLWN 323
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 50 FAGHKAGVYSVAFSPVHALIASGSKDRTVRLW 81
F+GHK V +A P L + S+DRT+RLW
Sbjct: 225 FSGHKGPVRHLAVHPSGKLTLTVSQDRTLRLW 320
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 5 ERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSP 64
ER+F GHK V + + + K +T S D + +WN AF + K SV ++P
Sbjct: 216 ERTFSGHKGPVRHLAVHPSGKLTLTVSQDRTLRLWNNMNGRIAF-ISNMKEAAESVRWAP 392
>01249
Length = 1743
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 104/285 (36%), Gaps = 29/285 (10%)
Frame = -1
Query: 36 VMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQPTVEGKSTVLKAH 95
V W+ + + F G + H L+ + + +W + + +S
Sbjct: 1671 VAAWDIQSRSSVRTFKGQALAAGCLCLRCGHTLLGAAQNKPVIHVWPLSKKDESQHKIVC 1492
Query: 96 TGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVS 155
G V + S DG + S + + IW + L+ + + + DG V
Sbjct: 1491 PGKVSVLVVSPDG-LFCLASISEKIYIWEMTGGSLVGLLSDFNEATK-IQFTDDGSQFVV 1318
Query: 156 GGDDRTVRIWDLNSKKVVRTFEDPTGLT--NTVSFHPD------------GTCIASGSTD 201
+ IWD ++ V T + GL T++ H + +AS S+D
Sbjct: 1317 ATSSGHLNIWDF-ARVVTTTSQRARGLKPGRTINAHSEPITGLHVGCGGPAARVASSSSD 1141
Query: 202 NSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYT-- 259
+ KLWD+ S LL+ TG V L +FLL+ LD + GQ+ +
Sbjct: 1140 GTCKLWDMLSGALLRTMVYETG-VGCLIMDKQEHFLLAG-LDNGDILCSPLFGQISQSEV 967
Query: 260 -------------LHGHEGATNGTAFSPAGDYFASCGADEQVMVW 291
L GH A AFS G AS + +V++W
Sbjct: 966 FVSKHTTKAGERVLQGHSDAVTCLAFSSDGQRLASGSQNGKVIIW 832
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 58/145 (40%)
Frame = -1
Query: 155 SGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVL 214
S G +V WD+ S+ VRTF+ + T + + I +W L
Sbjct: 1692 STGQQWSVAAWDIQSRSSVRTFKGQALAAGCLCLRCGHTLLGAAQNKPVIHVWPLSKKDE 1513
Query: 215 LQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSP 274
QH G V+ L P G F L +S+ + +W++ G L+ L AT F+
Sbjct: 1512 SQHKIVCPGKVSVLVVSPDGLFCL-ASISEKIYIWEMTGGSLVGLLSDFNEATK-IQFTD 1339
Query: 275 AGDYFASCGADEQVMVWKTNFDRFL 299
G F + + +W +F R +
Sbjct: 1338 DGSQFVVATSSGHLNIW--DFARVV 1270
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = -1
Query: 5 ERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFK 42
ER +GH DAVT + F+ + ++L +GS + V++WN +
Sbjct: 936 ERVLQGHSDAVTCLAFSSDGQRLASGSQNGKVIIWNME 823
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -1
Query: 84 TVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVAT 127
T + VL+ H+ V + FSSDG+ LA+ S + V IW++ +
Sbjct: 951 TTKAGERVLQGHSDAVTCLAFSSDGQRLASGSQNGKVIIWNMES 820
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/136 (19%), Positives = 56/136 (41%), Gaps = 16/136 (11%)
Frame = -1
Query: 92 LKAHTGTVRGVTFSSDGRM--LATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPD 149
+ AH+ + G+ G +A+ S D T K+W + + T+ ++ V C+ +
Sbjct: 1224 INAHSEPITGLHVGCGGPAARVASSSSDGTCKLWDMLSGALLRTMV-YETGVGCLIMDKQ 1048
Query: 150 GRLAVSGGDDRTVRIWDL--------------NSKKVVRTFEDPTGLTNTVSFHPDGTCI 195
++G D+ + L +K R + + ++F DG +
Sbjct: 1047 EHFLLAGLDNGDILCSPLFGQISQSEVFVSKHTTKAGERVLQGHSDAVTCLAFSSDGQRL 868
Query: 196 ASGSTDNSIKLWDLRS 211
ASGS + + +W++ S
Sbjct: 867 ASGSQNGKVIIWNMES 820
Score = 31.2 bits (69), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 69/183 (37%), Gaps = 26/183 (14%)
Frame = -1
Query: 13 DAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLR--AFRFAGHKAG----VYSVAFSPVH 66
+ T + F + Q V + + +W+F + + R G K G +S + +H
Sbjct: 1368 NEATKIQFTDDGSQFVVATSSGHLNIWDFARVVTTTSQRARGLKPGRTINAHSEPITGLH 1189
Query: 67 -------ALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKT 119
A +AS S D T +LW + TG + + +LA +
Sbjct: 1188 VGCGGPAARVASSSSDGTCKLWDMLSGALLRTMVYETGVGCLIMDKQEHFLLAGLDNGDI 1009
Query: 120 V--KIWSVATQKFAFT-----------LTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWD 166
+ ++ +Q F L GH + V C+ S DG+ SG + V IW+
Sbjct: 1008 LCSPLFGQISQSEVFVSKHTTKAGERVLQGHSDAVTCLAFSSDGQRLASGSQNGKVIIWN 829
Query: 167 LNS 169
+ S
Sbjct: 828 MES 820
>04088
Length = 511
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Frame = +3
Query: 99 VRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVH--ISPDGRLAVSG 156
V VTF+ DG+ S D TV++ T + TGH++ + ++ + L VSG
Sbjct: 39 VTSVTFTRDGQCSLVSSQDNTVRLMDKDTGEMLNEFTGHKHSQYKIDSCLNNEDTLVVSG 218
Query: 157 GDDRTVRIWDLNSKKVVRTFEDPTGL-TNTVSFHPDGTCIASGSTDNSIKLW 207
+D V WDL K+V T + T +++SFH C+ + D + LW
Sbjct: 219 SEDGKVYFWDLVEAKLVDTLDHKTTRPVHSLSFHHAELCLMTACADK-VFLW 371
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Frame = +3
Query: 185 TVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLS--FHPTGNFLLSSSL 242
+V+F DG C S DN+++L D + +L + H + + ++S S
Sbjct: 45 SVTFTRDGQCSLVSSQDNTVRLMDKDTGEMLNEFTGHKHSQYKIDSCLNNEDTLVVSGSE 224
Query: 243 DTTLKVWDLREGQLLYTL-HGHEGATNGTAFSPAGDYFASCGADEQVMVWKTN 294
D + WDL E +L+ TL H + +F A + AD +V +W+++
Sbjct: 225 DGKVYFWDLVEAKLVDTLDHKTTRPVHSLSFHHAELCLMTACAD-KVFLWRSS 380
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 4/114 (3%)
Frame = +3
Query: 14 AVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSV--AFSPVHALIAS 71
AVTSV F + + + S DN V + + F GHK Y + + L+ S
Sbjct: 36 AVTSVTFTRDGQCSLVSSQDNTVRLMDKDTGEMLNEFTGHKHSQYKIDSCLNNEDTLVVS 215
Query: 72 GSKDRTVRLWQPTVEGK--STVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIW 123
GS+D V W VE K T+ T V ++F L T DK V +W
Sbjct: 216 GSEDGKVYFWD-LVEAKLVDTLDHKTTRPVHSLSFHHAELCLMTACADK-VFLW 371
>14500
Length = 1238
Score = 38.1 bits (87), Expect(2) = 1e-05, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = +3
Query: 152 LAVSGGD-DRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIAS-GSTDNSIKLWDL 209
LA GG DR + W+ N+ + + + + + + I+S G N + +W
Sbjct: 249 LASGGGTADRHIHFWNCNTGTNLSSVDTKSQVCALLWSKEHRELISSHGFAQNQLIIWKY 428
Query: 210 RSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVW 249
+ + HT V H++ P G ++S++ D TL++W
Sbjct: 429 PAMSRVAELTGHTARVLHMAMSPDGETVVSAAADETLRLW 548
Score = 28.5 bits (62), Expect(2) = 1e-05, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 92 LKAHTGTVRGVTFSSDGRMLATCSDDKTVKIW 123
L H+ V G+ +S DG+ LA+ ++D + +W
Sbjct: 47 LSGHSQEVCGLRWSPDGKYLASGANDNLLCVW 142
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +3
Query: 12 KDAVTSVCFNHNMKQLVT--GSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHALI 69
K V ++ ++ ++L++ G N +++W + R GH A V +A SP +
Sbjct: 333 KSQVCALLWSKEHRELISSHGFAQNQLIIWKYPAMSRVAELTGHTARVLHMAMSPDGETV 512
Query: 70 ASGSKDRTVRLWQ 82
S + D T+RLW+
Sbjct: 513 VSAAADETLRLWK 551
Score = 30.4 bits (67), Expect(2) = 0.001, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +2
Query: 133 TLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDL-----NSKKVVRTFED 178
TL+GH V + SPDG+ SG +D + +W NS + + TF
Sbjct: 44 TLSGHSQEVCGLRWSPDGKYLASGANDNLLCVWPAQVTGGNSTQPLHTFSQ 196
Score = 28.9 bits (63), Expect(2) = 0.001, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 2/107 (1%)
Frame = +3
Query: 188 FHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSS--LDTT 245
+ P G+ D I W+ + L + V L + L+SS
Sbjct: 234 WQPSLLASGGGTADRHIHFWNCNTGTNLSSVDTKS-QVCALLWSKEHRELISSHGFAQNQ 410
Query: 246 LKVWDLREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWK 292
L +W + L GH A SP G+ S ADE + +WK
Sbjct: 411 LIIWKYPAMSRVAELTGHTARVLHMAMSPDGETVVSAAADETLRLWK 551
Score = 35.8 bits (81), Expect(2) = 0.002, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 11/110 (10%)
Frame = +3
Query: 67 ALIASG--SKDRTVRLWQ-------PTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSD- 116
+L+ASG + DR + W +V+ KS V + +S + R L +
Sbjct: 243 SLLASGGGTADRHIHFWNCNTGTNLSSVDTKSQVC--------ALLWSKEHRELISSHGF 398
Query: 117 -DKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIW 165
+ IW LTGH V + +SPDG VS D T+R+W
Sbjct: 399 AQNQLIIWKYPAMSRVAELTGHTARVLHMAMSPDGETVVSAAADETLRLW 548
Score = 23.5 bits (49), Expect(2) = 0.002, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 7 SFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVW 39
+ GH V + ++ + K L +G+ DN + VW
Sbjct: 44 TLSGHSQEVCGLRWSPDGKYLASGANDNLLCVW 142
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +3
Query: 54 KAGVYSVAFSPVH-ALIAS-GSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRML 111
K+ V ++ +S H LI+S G + +W+ + L HT V + S DG +
Sbjct: 333 KSQVCALLWSKEHRELISSHGFAQNQLIIWKYPAMSRVAELTGHTARVLHMAMSPDGETV 512
Query: 112 ATCSDDKTVKIWSVAT 127
+ + D+T+++W T
Sbjct: 513 VSAAADETLRLWKCFT 560
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 50 FAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQPTVEGKSTVLKAHT 96
+GH V + +SP +ASG+ D + +W V G ++ HT
Sbjct: 47 LSGHSQEVCGLRWSPDGKYLASGANDNLLCVWPAQVTGGNSTQPLHT 187
Score = 27.7 bits (60), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 259 TLHGHEGATNGTAFSPAGDYFASCGADEQVMVW 291
TL GH G +SP G Y AS D + VW
Sbjct: 44 TLSGHSQEVCGLRWSPDGKYLASGANDNLLCVW 142
>15780
Length = 735
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%)
Frame = -1
Query: 155 SGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDL 209
+ G D TV +WD+ S V T + F DGT +ASG DNSI+LWDL
Sbjct: 723 TAGADHTVIVWDIASGTAVAHLTAHTDTVYALCFSRDGTVLASGGMDNSIRLWDL 559
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = -1
Query: 109 RMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDL 167
+ L+T D TV +W +A+ LT H + V + S DG + SGG D ++R+WDL
Sbjct: 735 KYLSTAGADHTVIVWDIASGTAVAHLTAHTDTVYALCFSRDGTVLASGGMDNSIRLWDL 559
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = -1
Query: 195 IASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDL 251
+++ D+++ +WD+ S + H AHT V L F G L S +D ++++WDL
Sbjct: 729 LSTAGADHTVIVWDIASGTAVAHLTAHTDTVYALCFSRDGTVLASGGMDNSIRLWDL 559
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -1
Query: 25 KQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQ 82
K L T D+ V+VW+ H VY++ FS ++ASG D ++RLW
Sbjct: 735 KYLSTAGADHTVIVWDIASGTAVAHLTAHTDTVYALCFSRDGTVLASGGMDNSIRLWD 562
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -1
Query: 69 IASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVA 126
+++ D TV +W L AHT TV + FS DG +LA+ D ++++W +A
Sbjct: 729 LSTAGADHTVIVWDIASGTAVAHLTAHTDTVYALCFSRDGTVLASGGMDNSIRLWDLA 556
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -1
Query: 8 FRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNF 41
H D V ++CF+ + L +G +DN + +W+
Sbjct: 660 LTAHTDTVYALCFSRDGTVLASGGMDNSIRLWDL 559
>01598
Length = 1545
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 72/175 (41%), Gaps = 27/175 (15%)
Frame = +1
Query: 147 SPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGT---------C--I 195
SPD A G D+ +V + + K+V L N V +HP T C +
Sbjct: 1000 SPDQNAAAVGTDEGSVYVVTIQDLKIVAAIRTQQKLINCVRWHPRLTDQSPAGSPCCHWL 1179
Query: 196 ASGSTDNSIKLWDLRS-----------NVLLQHYR---AHTGPVTHLSFHPTGNF-LLSS 240
A+ D I + DL S +++L R H+ VT +S+ P + L+S
Sbjct: 1180 AAAGNDQVIHVVDLASVFAEREGDKETSLILTSLRELSGHSQRVTDMSWSPHHDARLVSV 1359
Query: 241 SLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAG-DYFASCGADEQVMVWKTN 294
D VWD+++G L GH G FS D + G+D V VW+ +
Sbjct: 1360 GYDAEAFVWDVQKGTALAQFKGHMGRLLTCQFSGLDPDLVMTGGSDASVHVWRVS 1524
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 27/193 (13%)
Frame = +1
Query: 68 LIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVR-----GVTF---------SSDGRMLAT 113
LIA+GSKDRT+R+W + +GK +K R G F S+ L +
Sbjct: 106 LIATGSKDRTIRVWTLS-QGKQIFMKKLPNQRREAGDTGSRFKVWLAIHWLKSNPEQLVS 282
Query: 114 CSDDKTVKIWSVATQK----FAFTLTGHQNWVRCVH----ISPDGRLAVSGGDDRTVRIW 165
S + +WS+ K F + ++ +R V PD + + DR V +W
Sbjct: 283 SSSGGDLLLWSLRYTKGQAYQTFQTSDYRPHMRPVFNICASGPDSKTLCTFAQDRQVVLW 462
Query: 166 DLNSKKVVRTFEDPTGLTNTVSFHP-DGTCIASGSTDNSIKLWDLRSNV----LLQHYRA 220
DL + + V + G V P D +A G D+ I+ W++ + + ++
Sbjct: 463 DLETMEAVASMATLGGHVYCVRTSPIDPGRVAVGVGDSMIRTWNMSNKTNPYDVTTLWQG 642
Query: 221 HTGPVTHLSFHPT 233
VT +++HPT
Sbjct: 643 IKSKVTAVAWHPT 681
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 131/355 (36%), Gaps = 58/355 (16%)
Frame = +1
Query: 8 FRGHKDAVTSVCFN-HNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVH 66
+R H V ++C + + K L T + D V++W+ + A VY V SP+
Sbjct: 364 YRPHMRPVFNICASGPDSKTLCTFAQDRQVVLWDLETMEAVASMATLGGHVYCVRTSPID 543
Query: 67 -ALIASGSKDRTVRLWQPTVEGK----STVLKAHTGTVRGVTF-SSDGRMLATCSDDKTV 120
+A G D +R W + + +T+ + V V + + L +DD +
Sbjct: 544 PGRVAVGVGDSMIRTWNMSNKTNPYDVTTLWQGIKSKVTAVAWHPTKEGWLGFGTDDGRI 723
Query: 121 KIWSVATQK---FAFTLTGHQNWVRC---VHISP-DGR-----------------LAVSG 156
++ V + K + T +V C +SP DG+ +S
Sbjct: 724 GVFDVLSHKMPTLSNTFHHRTAYVVCWGPASLSPTDGKSFSLYSVGDCKILEHSSAVLSR 903
Query: 157 GDDRTVRIWDLNSKKVVRTFEDPTGLTNT-VSFHPDGTCIASGSTDNSIKLWDLRSNVLL 215
G+ + I D+ K + GL T +S+ PD A G+ + S+ + ++ ++
Sbjct: 904 GEKKANAI-DITQKIGAVNSDQVKGLKATELSWSPDQNAAAVGTDEGSVYVVTIQDLKIV 1080
Query: 216 QHYRAHTGPVTHLSFH-----------PTGNFLLSSSLDTTLKVWDL------REGQL-- 256
R + + +H P ++L ++ D + V DL REG
Sbjct: 1081AAIRTQQKLINCVRWHPRLTDQSPAGSPCCHWLAAAGNDQVIHVVDLASVFAEREGDKET 1260
Query: 257 ------LYTLHGHEGATNGTAFSPAGD-YFASCGADEQVMVWKTNFDRFLEDYTG 304
L L GH ++SP D S G D + VW L + G
Sbjct: 1261SLILTSLRELSGHSQRVTDMSWSPHHDARLVSVGYDAEAFVWDVQKGTALAQFKG 1425
Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 6 RSFRGHKDAVTSVCFN-HNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSP 64
R GH VT + ++ H+ +LV+ D VW+ + +F GH + + FS
Sbjct: 1282 RELSGHSQRVTDMSWSPHHDARLVSVGYDAEAFVWDVQKGTALAQFKGHMGRLLTCQFSG 1461
Query: 65 VHA-LIASGSKDRTVRLWQ 82
+ L+ +G D +V +W+
Sbjct: 1462 LDPDLVMTGGSDASVHVWR 1518
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 24/150 (16%)
Frame = +1
Query: 150 GRLAVSGGDDRTVRIWDLNSKKVVRTFEDP-----TGLTNT-----VSFH---PDGTCIA 196
G L +G DRT+R+W L+ K + + P G T + ++ H + +
Sbjct: 100 GCLIATGSKDRTIRVWTLSQGKQIFMKKLPNQRREAGDTGSRFKVWLAIHWLKSNPEQLV 279
Query: 197 SGSTDNSIKLWDLR-------SNVLLQHYRAHTGPVTHL-SFHPTGNFLLSSSLDTTLKV 248
S S+ + LW LR YR H PV ++ + P L + + D + +
Sbjct: 280 SSSSGGDLLLWSLRYTKGQAYQTFQTSDYRPHMRPVFNICASGPDSKTLCTFAQDRQVVL 459
Query: 249 WDLREGQL---LYTLHGHEGATNGTAFSPA 275
WDL + + TL GH + P
Sbjct: 460 WDLETMEAVASMATLGGHVYCVRTSPIDPG 549
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 96/237 (40%), Gaps = 31/237 (13%)
Frame = +1
Query: 81 WQPTVEGKSTVLKAHTGTVRGVT---FSSDGRMLATCSDDKTVKIWSVATQKFAF----- 132
W P V+G+ T LK G+T + G ++AT S D+T+++W+++ K F
Sbjct: 16 WCP-VQGE-TFLKESQDATNGLTDPERDTGGCLIATGSKDRTIRVWTLSQGKQIFMKKLP 189
Query: 133 --------TLTGHQNW--VRCVHISPDGRLAVSGGDDRTVRIWDLNSKK--VVRTFEDP- 179
T + + W + + +P+ ++ S G D + +W L K +TF+
Sbjct: 190 NQRREAGDTGSRFKVWLAIHWLKSNPEQLVSSSSGGD--LLLWSLRYTKGQAYQTFQTSD 363
Query: 180 -----TGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTG 234
+ N + PD + + + D + LWDL + + G V + P
Sbjct: 364 YRPHMRPVFNICASGPDSKTLCTFAQDRQVVLWDLETMEAVASMATLGGHVYCVRTSPID 543
Query: 235 NFLLSSSL-DTTLKVWDLREGQLLYTL----HGHEGATNGTAFSPAGDYFASCGADE 286
++ + D+ ++ W++ Y + G + A+ P + + G D+
Sbjct: 544 PGRVAVGVGDSMIRTWNMSNKTNPYDVTTLWQGIKSKVTAVAWHPTKEGWLGFGTDD 714
>02948
Length = 1207
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 115/305 (37%), Gaps = 19/305 (6%)
Frame = -2
Query: 10 GHKDAVTSVCFNH-NMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHAL 68
GH+ VT + N N QL++ LD + VW + + R H + P+HAL
Sbjct: 1203 GHRGQVTGLALNPANKLQLLSCGLDGNINVWAYVDGV-LLRSYSH--------YMPLHAL 1051
Query: 69 IA---SGSKDRTVR----------LWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCS 115
++ SG+ + L P +GK+ G G ++A+C
Sbjct: 1050 VSVDXSGTFAVAIAQRPHLSHCSLLRLPLKKGKAPASPQKQG---GEVSCKTDVVIASCD 880
Query: 116 DDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGR-LAVSGGDDRTVRIWDLNSKKVVR 174
D R V +GR +A G D T+ + K
Sbjct: 879 SD-----------------------YRTVASGCNGRYIAAVQGCDLTIFSCSKSRKPKKL 769
Query: 175 TFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLW---DLRSNVL-LQHYRAHTGPVTHLSF 230
++ T VS HP CIA+G I W D VL + H+ H+ PVT L+F
Sbjct: 768 KAQNNAAFT-CVSCHPTDVCIATGHASGKITFWWNFDQDKTVLSVSHW--HSLPVTCLAF 598
Query: 231 HPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMV 290
P G+ LLS + TL W + + L + SP G +F + +D + V
Sbjct: 597 TPEGSCLLSGGHECTLVRWQMNSEHKEF-LPRLGAPLHNIVVSPDGVFFVTGHSDNVLQV 421
Query: 291 WKTNF 295
++F
Sbjct: 420 ITSSF 406
>31384
Length = 474
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Frame = -1
Query: 168 NSKKVVRTFEDPTGLTNTVSFHP---DGTCIASGSTDNSIKLWDLRSN--VLLQHYRAHT 222
N K P + + F P T + SGS DN + W+++ + + + + HT
Sbjct: 312 NPMKDFEVTSPPDDSVSCLKFSPGALPSTFLISGSWDNKVSCWEVQQSGQTIPKAQQTHT 133
Query: 223 GPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLL 257
GPV + + G + ++S D T KVWDL Q +
Sbjct: 132 GPVLDVDWSDDGTKVFTASCDKTAKVWDLNSNQCM 28
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Frame = -1
Query: 57 VYSVAFSP---VHALIASGSKDRTVRLWQPTVEGKSTVLKA---HTGTVRGVTFSSDGRM 110
V + FSP + SGS D V W+ G+ T+ KA HTG V V +S DG
Sbjct: 267 VSCLKFSPGALPSTFLISGSWDNKVSCWEVQQSGQ-TIPKAQQTHTGPVLDVDWSDDGTK 91
Query: 111 LATCSDDKTVKIWSVATQK 129
+ T S DKT K+W + + +
Sbjct: 90 VFTASCDKTAKVWDLNSNQ 34
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Frame = -1
Query: 141 VRCVHISPDGRLA----VSGGDDRTVRIWDLNS--KKVVRTFEDPTGLTNTVSFHPDGTC 194
V C+ SP G L +SG D V W++ + + + + TG V + DGT
Sbjct: 267 VSCLKFSP-GALPSTFLISGSWDNKVSCWEVQQSGQTIPKAQQTHTGPVLDVDWSDDGTK 91
Query: 195 IASGSTDNSIKLWDLRSNVLLQHYRAHTGPV 225
+ + S D + K+WDL SN +Q + H PV
Sbjct: 90 VFTASCDKTAKVWDLNSNQCMQIAQ-HDAPV 1
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -1
Query: 117 DKTVKIWSV--ATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVR 174
D V W V + Q H V V S DG + D+T ++WDLNS + ++
Sbjct: 204 DNKVSCWEVQQSGQTIPKAQQTHTGPVLDVDWSDDGTKVFTASCDKTAKVWDLNSNQCMQ 25
>30176
Length = 365
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +2
Query: 90 TVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIW 123
T LK+HT TV +TF G LA+CSDDKT+KIW
Sbjct: 2 TTLKSHTSTVWNLTFDKTGTRLASCSDDKTIKIW 103
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 219 RAHTGPVTHLSFHPTGNFLLSSSLDTTLKVW 249
++HT V +L+F TG L S S D T+K+W
Sbjct: 11 KSHTSTVWNLTFDKTGTRLASCSDDKTIKIW 103
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 50 FAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQPTVEG 87
H + V+++ F +AS S D+T+++WQ + G
Sbjct: 8 LKSHTSTVWNLTFDKTGTRLASCSDDKTIKIWQEYLPG 121
>16105
Length = 960
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
Frame = -2
Query: 91 VLKAHTGTVRGVTFSS-DGRMLATCSDDKTVKIWSVATQKFAFTLT-------GHQNWVR 142
++ H G V + + + ++A+ SDD TVK+W + LT GHQ R
Sbjct: 590 LVAGHKGAVLDIQWCPHNDNVIASASDDCTVKVWQIPDSGLVTNLTDPVVDLVGHQK--R 417
Query: 143 CVHI--SPDGR-LAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGS 199
C I P + + VS G D + W++ + + + + P + +SF+ +G+ +
Sbjct: 416 CCLIVWHPSAQNVLVSAGADNKILFWNVGTGEPMLEVDVPD-MIYCMSFNFNGSRLVCTC 240
Query: 200 TDNSIKLWDLRSNVLLQHYRAHTG 223
D +++ D S +L+ + H G
Sbjct: 239 KDKKLRIIDSHSGAVLKEGKCHDG 168
>20662
Length = 1220
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Frame = +2
Query: 149 DGRLAVSGGDDRTVRIWDLNSK----KVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSI 204
D + G D V +W+L + ++ + + +T +VS + D + S S D+ I
Sbjct: 281 DSHKVLVGLDTGGVALWELQDEDKMFSMLSSACEHDDMTASVSINSDXSHYLSASYDHGI 460
Query: 205 KLW--DLRSNVLLQHYRAHTGPVTHLSFHPTGNFL-LSSSLDTTLKVWDLREGQ 255
K+W DL S L YRAH+ V + HPT L LS S D + +WD+RE +
Sbjct: 461 KVWNTDLTS---LYTYRAHSDIVWDVQCHPTEPALFLSCSQDGKIVLWDVRESK 613
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +2
Query: 11 HKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVH-ALI 69
H D SV N + ++ S D+ + VWN + + H V+ V P AL
Sbjct: 383 HDDMTASVSINSDXSHYLSASYDHGIKVWNTD-LTSLYTYRAHSDIVWDVQCHPTEPALF 559
Query: 70 ASGSKDRTVRLWQPTVEGKSTVL 92
S S+D + LW +T L
Sbjct: 560 LSCSQDGKIVLWDVRESKPATCL 628
>21921
Length = 1341
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = -1
Query: 131 AFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHP 190
A GH VR + P G+ VSG DD T+R W+++S + ++T + G +V+++P
Sbjct: 504 ALVYKGHTGIVRSICPDPTGQWLVSGSDDGTIRFWEVSSGRCMKTLQV-GGCVTSVAWNP 328
Query: 191 DGT-CIASGSTDNSIKL 206
+ + C+ + + + ++ L
Sbjct: 327 NPSLCVVAATLNTTVLL 277
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = -1
Query: 218 YRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSP 274
Y+ HTG V + PTG +L+S S D T++ W++ G+ + TL G A++P
Sbjct: 495 YKGHTGIVRSICPDPTGQWLVSGSDDGTIRFWEVSSGRCMKTLQVG-GCVTSVAWNP 328
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = -1
Query: 68 LIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVAT 127
L+ K + +R P ++ V K HTG VR + G+ L + SDD T++ W V++
Sbjct: 558 LLPKLPKPKDLR---PFPTTQALVYKGHTGIVRSICPDPTGQWLVSGSDDGTIRFWEVSS 388
Query: 128 QKFAFTL 134
+ TL
Sbjct: 387 GRCMKTL 367
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = -1
Query: 180 TGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNF-LL 238
TG+ ++ P G + SGS D +I+ W++ S ++ + G VT ++++P + ++
Sbjct: 483 TGIVRSICPDPTGQWLVSGSDDGTIRFWEVSSGRCMKTLQV-GGCVTSVAWNPNPSLCVV 307
Query: 239 SSSLDTTL 246
+++L+TT+
Sbjct: 306 AATLNTTV 283
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 43 PQLRAFRFAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQ 82
P +A + GH V S+ P + SGS D T+R W+
Sbjct: 516 PTTQALVYKGHTGIVRSICPDPTGQWLVSGSDDGTIRFWE 397
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = -1
Query: 8 FRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHA 67
++GH V S+C + + LV+GS D + W R + V SVA++P +
Sbjct: 495 YKGHTGIVRSICPDPTGQWLVSGSDDGTIRFWEVS-SGRCMKTLQVGGCVTSVAWNPNPS 319
Query: 68 L-IASGSKDRTVRLWQPTVEGKSTV 91
L + + + + TV L P + K V
Sbjct: 318 LCVVAATLNTTVLLINPGLGDKLVV 244
>30295
Length = 593
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 4/121 (3%)
Frame = +2
Query: 92 LKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGR 151
L+ H + + +++D R L + S D + +W T + +WV +P G
Sbjct: 233 LRXHLAKIYAMHWATDSRNLVSASQDGKLIVWDGYTTNKVHAIPLRSSWVMTCAYAPSGG 412
Query: 152 LAVSGGDDRTVRIWDLNSK----KVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLW 207
GG D I+ L ++ +V R TG + F D I + S D + LW
Sbjct: 413 YVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFIDDNQ-IVTSSGDMTCALW 589
Query: 208 D 208
D
Sbjct: 590 D 592
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Frame = +2
Query: 133 TLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDG 192
TL H + +H + D R VS D + +WD + V + T ++ P G
Sbjct: 230 TLRXHLAKIYAMHWATDSRNLVSASQDGKLIVWDGYTTNKVHAIPLRSSWVMTCAYAPSG 409
Query: 193 TCIASGSTDNSIKLWDLRS---NVLL-QHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKV 248
+A G DN ++ L++ NV + + HTG ++ F N +++SS D T +
Sbjct: 410 GYVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF-IDDNQIVTSSGDMTCAL 586
Query: 249 WD 250
WD
Sbjct: 587 WD 592
>19140
Length = 573
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 1/144 (0%)
Frame = -3
Query: 92 LKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGR 151
LK HT V+ + + DG + S D T+++WS+ Q+ T H V + +
Sbjct: 499 LKGHTDNVKALVLNRDGTQCLSGSSDGTIRLWSLGQQRCVATFRVHDEGVWALQANESFT 320
Query: 152 LAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHP-DGTCIASGSTDNSIKLWDLR 210
SGG D V D+ + + + P D + +TD+ IK W +R
Sbjct: 319 TLYSGGRDHQVWATDIKNPDNRELICEEKAPVLKLELTPTDPPSLWVATTDSCIKNWPVR 140
Query: 211 SNVLLQHYRAHTGPVTHLSFHPTG 234
L + RA +G + HPT
Sbjct: 139 ----LPNPRA-SGEYDNDRIHPTA 83
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Frame = -3
Query: 8 FRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHA 67
+GH D V ++ N + Q ++GS D + +W+ Q F H GV+++ +
Sbjct: 499 LKGHTDNVKALVLNRDGTQCLSGSSDGTIRLWSLGQQRCVATFRVHDEGVWALQANESFT 320
Query: 68 LIASGSKDRTVRLWQPTV---EGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWS 124
+ SG +D V W + + + + + ++ +D L + D +K W
Sbjct: 319 TLYSGGRDHQV--WATDIKNPDNRELICEEKAPVLKLELTPTDPPSLWVATTDSCIKNWP 146
Query: 125 V 125
V
Sbjct: 145 V 143
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Frame = -3
Query: 215 LQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSP 274
L + HT V L + G LS S D T+++W L + + + T H+ +
Sbjct: 508 LMKLKGHTDNVKALVLNRDGTQCLSGSSDGTIRLWSLGQQRCVATFRVHDEGVWALQANE 329
Query: 275 AGDYFASCGADEQVMVWKT------NFDRFLEDYTGVSVAKQTRTDP 315
+ S G D Q VW T N + E+ V + T TDP
Sbjct: 328 SFTTLYSGGRDHQ--VWATDIKNPDNRELICEEKAPVLKLELTPTDP 194
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = -3
Query: 191 DGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLD-----TT 245
DGT SGS+D +I+LW L + +R H V L + + L S D T
Sbjct: 454 DGTQCLSGSSDGTIRLWSLGQQRCVATFRVHDEGVWALQANESFTTLYSGGRDHQVWATD 275
Query: 246 LKVWDLRE 253
+K D RE
Sbjct: 274 IKNPDNRE 251
>29912
Length = 510
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Frame = +3
Query: 10 GHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHALI 69
G ++ + +V + L G+ V VW+ Q + AGH A V S++++ ++
Sbjct: 3 GPEEYIGAVSWIKEGNYLALGTSTGEVQVWDVTQQKKLRTMAGHAARVGSLSWNSF--IV 176
Query: 70 ASGSKDRTVRLWQPTVEGKST-VLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSV--- 125
+SGS+ + V L H+ V G+ +S DG+ LA+ ++D + +W
Sbjct: 177 SSGSRSGNIHHHDVRVADHHVGTLSGHSQEVCGLRWSPDGKYLASGANDNLLCVWPAQVT 356
Query: 126 ---ATQKFAFTLTGHQNWVRCVHISP--DGRLAVSGGD 158
+TQ T + HQ V+ + P LA GGD
Sbjct: 357 GGNSTQPL-HTFSQHQAAVKALAWCPWQPSXLASGGGD 467
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Frame = +3
Query: 179 PTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLL 238
P VS+ +G +A G++ +++WD+ L+ H V LS++ +F++
Sbjct: 6 PEEYIGAVSWIKEGNYLALGTSTGEVQVWDVTQQKKLRTMAGHAARVGSLSWN---SFIV 176
Query: 239 SS-SLDTTLKVWDLREG-QLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVW 291
SS S + D+R + TL GH G +SP G Y AS D + VW
Sbjct: 177 SSGSRSGNIHHHDVRVADHHVGTLSGHSQEVCGLRWSPDGKYLASGANDNLLCVW 341
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 6/156 (3%)
Frame = +3
Query: 99 VRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGD 158
+ V++ +G LA + V++W V QK T+ GH R +S + + SG
Sbjct: 18 IGAVSWIKEGNYLALGTSTGEVQVWDVTQQKKLRTMAGHA--ARVGSLSWNSFIVSSGSR 191
Query: 159 DRTVRIWDLN-SKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLR-----SN 212
+ D+ + V T + + + PDG +ASG+ DN + +W + S
Sbjct: 192 SGNIHHHDVRVADHHVGTLSGHSQEVCGLRWSPDGKYLASGANDNLLCVWPAQVTGGNST 371
Query: 213 VLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKV 248
L + H V L++ P L+S L V
Sbjct: 372 QPLHTFSQHQAAVKALAWCPWQPSXLASGGGDVLIV 479
Score = 35.0 bits (79), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Frame = +3
Query: 69 IASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSV-AT 127
+A G+ V++W T + K + H V ++++S ++++ S + V
Sbjct: 54 LALGTSTGEVQVWDVTQQKKLRTMAGHAARVGSLSWNS--FIVSSGSRSGNIHHHDVRVA 227
Query: 128 QKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDL-----NSKKVVRTFEDPTGL 182
TL+GH V + SPDG+ SG +D + +W NS + + TF
Sbjct: 228 DHHVGTLSGHSQEVCGLRWSPDGKYLASGANDNLLCVWPAQVTGGNSTQPLHTFSQHQAA 407
Query: 183 TNTVSFHP-DGTCIASGSTD 201
+++ P + +ASG D
Sbjct: 408 VKALAWCPWQPSXLASGGGD 467
>05393
Length = 904
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 6/156 (3%)
Frame = +1
Query: 25 KQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHALIASGSKDR-TVRLWQP 83
+ L+TGS DN V V + + + + V ++ + L D+ V +
Sbjct: 4 RHLLTGSFDNTVKVVDCRSAETCHKSWTVEGEVEKAVWNHHNPLQLLACTDKGMVYCFDI 183
Query: 84 TVEGKSTVLKAHTGTVRGVTFSSD--GRMLATCSDDKTVKIWSVATQK--FAFTLTGHQN 139
E + AH+ V GV SS G M+ T S+DKT+K+W + K F+
Sbjct: 184 RHEKPVFSVGAHSSCVTGVCLSSQIPGLMITT-SEDKTMKVWDIQDDKPTHVFSRNLKMK 360
Query: 140 WVRCVHISPDGRLAVS-GGDDRTVRIWDLNSKKVVR 174
+ C P+ + GG R ++WD+ VR
Sbjct: 361 ELHCTGCCPEAPFVFAVGGGRREPKVWDIRESAAVR 468
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Frame = +1
Query: 69 IASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSS-----DGRMLATCSDDKTVKIW 123
+ +GS D TV++ V+ +S + TV G + + L C+D V +
Sbjct: 10 LLTGSFDNTVKV----VDCRSAETCHKSWTVEGEVEKAVWNHHNPLQLLACTDKGMVYCF 177
Query: 124 SVATQKFAFTLTGHQNWVRCVHISPD-GRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGL 182
+ +K F++ H + V V +S L ++ +D+T+++WD+ K F +
Sbjct: 178 DIRHEKPVFSVGAHSSCVTGVCLSSQIPGLMITTSEDKTMKVWDIQDDKPTHVFSRNLKM 357
Query: 183 TNTVSFHPDGTC------IASGSTDNSIKLWDLRSNVLLQH 217
H G C A G K+WD+R + ++H
Sbjct: 358 KE---LHCTGCCPEAPFVFAVGGGRREPKVWDIRESAAVRH 471
>01462
Length = 995
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +2
Query: 109 RMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLN 168
R L + D+ + +W + ++ + GH++++ V + D + VS +D TVR+WD+
Sbjct: 236 RRLYAGAGDRKIHVWDIEAGQYLNAMEGHKDYIHKVVMKNDAQECVSASEDGTVRMWDIR 415
Query: 169 S 169
S
Sbjct: 416 S 418
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 78/209 (37%), Gaps = 2/209 (0%)
Frame = +2
Query: 3 TLERSFRGHKDAVTSVCFNHNM--KQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSV 60
+L RS V S+ + M ++L G+ D + VW+ + GHK ++ V
Sbjct: 164 SLPRSGVFSNAEVNSIAVDEKMGTRRLYAGAGDRKIHVWDIEAGQYLNAMEGHKDYIHKV 343
Query: 61 AFSPVHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTV 120
S S+D TVR+W +++ T TV + S +
Sbjct: 344 VMKNDAQECVSASEDGTVRMWD---------IRSSTETVHCLEPSKN------------- 457
Query: 121 KIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPT 180
+ + L G W+RC+ + P+ V GG + + W L + F+ P+
Sbjct: 458 -------ELCSRPLLG--KWLRCLALDPEEGWLVCGGGPK-LSAWHLRTLAPTTIFDTPS 607
Query: 181 GLTNTVSFHPDGTCIASGSTDNSIKLWDL 209
N FH + I S T + W L
Sbjct: 608 VSQNVALFHDEF--ILSAGTSPVMNHWRL 688
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = +2
Query: 151 RLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLR 210
R +G DR + +WD+ + + + E + V D S S D ++++WD+R
Sbjct: 236 RRLYAGAGDRKIHVWDIEAGQYLNAMEGHKDYIHKVVMKNDAQECVSASEDGTVRMWDIR 415
Query: 211 SNVLLQH 217
S+ H
Sbjct: 416 SSTETVH 436
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 38/90 (42%)
Frame = +2
Query: 195 IASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREG 254
+ +G+ D I +WD+ + L H + + +S+S D T+++WD+R
Sbjct: 242 LYAGAGDRKIHVWDIEAGQYLNAMEGHKDYIHKVVMKNDAQECVSASEDGTVRMWDIRSS 421
Query: 255 QLLYTLHGHEGATNGTAFSPAGDYFASCGA 284
T+H E + N P + C A
Sbjct: 422 T--ETVHCLEPSKNELCSRPLLGKWLRCLA 505
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = +2
Query: 237 LLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVW 291
L + + D + VWD+ GQ L + GH+ + S D V +W
Sbjct: 242 LYAGAGDRKIHVWDIEAGQYLNAMEGHKDYIHKVVMKNDAQECVSASEDGTVRMW 406
>17298
Length = 476
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = -1
Query: 166 DLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPV 225
++ S + +R + D G N V F+ + T I SGS DN+++ WD RS R+HT P+
Sbjct: 254 NVASGQALRKYRDHAGTVNCVKFNEESTVILSGSLDNTVRAWDTRS-------RSHT-PI 99
Query: 226 THL 228
L
Sbjct: 98 QVL 90
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -1
Query: 215 LQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLR 252
L+ YR H G V + F+ +LS SLD T++ WD R
Sbjct: 233 LRKYRDHAGTVNCVKFNEESTVILSGSLDNTVRAWDTR 120
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 11/86 (12%)
Frame = -1
Query: 36 VMVWNFKPQLRAFR-FAGHKAGVYSVAFSPVHALIASGSKDRTVRLW----------QPT 84
V+V N +A R + H V V F+ +I SGS D TVR W Q
Sbjct: 269 VVVGNNVASGQALRKYRDHAGTVNCVKFNEESTVILSGSLDNTVRAWDTRSRSHTPIQVL 90
Query: 85 VEGKSTVLKAHTGTVRGVTFSSDGRM 110
E +V +T S+DGR+
Sbjct: 89 DEATDSVTSIQVSDYEILTGSADGRV 12
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 17/70 (24%)
Frame = -1
Query: 118 KTVKIW-----------------SVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDR 160
KTVK+W +VA+ + H V CV + + + +SG D
Sbjct: 323 KTVKMWQRRQVCWHICDGVVVGNNVASGQALRKYRDHAGTVNCVKFNEESTVILSGSLDN 144
Query: 161 TVRIWDLNSK 170
TVR WD S+
Sbjct: 143 TVRAWDTRSR 114
>27681
Length = 465
Score = 30.8 bits (68), Expect(2) = 4e-04, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 223 GPVTHLSFHPTGNFLLSSSLDTTLKVWDLREG 254
P+ L ++ GN++LS+ +D T +WD G
Sbjct: 288 APIFALKWNKRGNYILSAGVDKTTIIWDASSG 383
Score = 30.4 bits (67), Expect(2) = 4e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 14/92 (15%)
Frame = +2
Query: 147 SPDGRLAVSGGDDRTVRIWDLNSKK-------VVRTFEDPTGL-------TNTVSFHPDG 192
+P L SG D T RIW++ S+ V+R G ++ ++ +G
Sbjct: 20 NPTNDLLASGSGDSTARIWNMTSETPNNANQLVLRHCIQKGGTEVPSNKDVTSLDWNSEG 199
Query: 193 TCIASGSTDNSIKLWDLRSNVLLQHYRAHTGP 224
T +A+GS D +LW + L+ H GP
Sbjct: 200 TLLATGSYDGYARLWRTDGH-LVNTLGQHKGP 292
Score = 37.4 bits (85), Expect(2) = 9e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 14/81 (17%)
Frame = +2
Query: 57 VYSVAFSPVHALIASGSKDRTVRLWQPTVE----GKSTVLK---AHTGT-------VRGV 102
V+ A++P + L+ASGS D T R+W T E VL+ GT V +
Sbjct: 2 VFICAWNPTNDLLASGSGDSTARIWNMTSETPNNANQLVLRHCIQKGGTEVPSNKDVTSL 181
Query: 103 TFSSDGRMLATCSDDKTVKIW 123
++S+G +LAT S D ++W
Sbjct: 182 DWNSEGTLLATGSYDGYARLW 244
Score = 22.7 bits (47), Expect(2) = 9e-04, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 150 GRLAVSGGDDRTVRIWDLNSKKVVRTF 176
G +S G D+T IWD +S + F
Sbjct: 321 GNYILSAGVDKTTIIWDASSGSCTQQF 401
Score = 33.1 bits (74), Expect(2) = 0.036, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Frame = +2
Query: 187 SFHPDGTCIASGSTDNSIKLWDLRS-------NVLLQHYRAHTG-------PVTHLSFHP 232
+++P +ASGS D++ ++W++ S ++L+H G VT L ++
Sbjct: 14 AWNPTNDLLASGSGDSTARIWNMTSETPNNANQLVLRHCIQKGGTEVPSNKDVTSLDWNS 193
Query: 233 TGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEG 265
G L + S D ++W +G L+ TL H+G
Sbjct: 194 EGTLLATGSYDGYARLWRT-DGHLVNTLGQHKG 289
Score = 21.2 bits (43), Expect(2) = 0.036, Method: Compositional matrix adjust.
Identities = 6/20 (30%), Positives = 12/20 (60%)
Frame = +3
Query: 272 FSPAGDYFASCGADEQVMVW 291
++ G+Y S G D+ ++W
Sbjct: 309 WNKRGNYILSAGVDKTTIIW 368
>39204
Length = 1684
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 81/203 (39%), Gaps = 19/203 (9%)
Frame = -2
Query: 135 TGHQNWVRCVHISP------DGRLAVSGGDDRTVRIWDLNS-----KKVVRTFEDPTG-- 181
T H VRC+ P + VS GDD ++W L + K V R + G
Sbjct: 1278 TPHYKAVRCLRFKPVTDSESPAPMLVSAGDDGMFKLWTLTTRTHHGKPVERWTCESVGHY 1099
Query: 182 ---LTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSF--HPTGNF 236
F DGT +A D ++ LW+ +NVL++ + P+ + F NF
Sbjct: 1098 RQKAATMARFSHDGTSLAV-VFDTALTLWNPDTNVLMETLSFGSDPILAVEFGGEKCANF 922
Query: 237 LLSSSLDTTLKVWDLREGQLLYTLHGH-EGATNGTAFSPAGDYFASCGADEQVMVWKTNF 295
++ S+ T + V +L TL H + GD + AD+ V ++ N
Sbjct: 921 VVFST-PTCVNVLNLS------TLSVHMQVMLRRAILXTDGDLMCAVSADQDVYXFRPNE 763
Query: 296 DRFLEDYTGVSVAKQTRTDPLIS 318
D+ V K+ +P++S
Sbjct: 762 DK------PVFYKKKATENPIVS 712
>27806
Length = 419
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -1
Query: 232 PTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVW 291
P + ++S D T +++ + G + T GH+G+ N F P D + D VW
Sbjct: 395 PGHPIIGTASADHTARIYSIETGACVLTYGGHQGSVNAVRFHPGQDLVLTASGDHTAHVW 216
Query: 292 KTNFDR 297
+ F +
Sbjct: 215 RAQFSQ 198
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = -1
Query: 190 PDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVW 249
P I + S D++ +++ + + + Y H G V + FHP + +L++S D T VW
Sbjct: 395 PGHPIIGTASADHTARIYSIETGACVLTYGGHQGSVNAVRFHPGQDLVLTASGDHTAHVW 216
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = -1
Query: 110 MLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIW 165
++ T S D T +I+S+ T T GHQ V V P L ++ D T +W
Sbjct: 383 IIGTASADHTARIYSIETGACVLTYGGHQGSVNAVRFHPGQDLVLTASGDHTAHVW 216
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = -1
Query: 57 VYSVAFS-PVHALIASGSKDRTVRLWQPTVEGKSTVLK--AHTGTVRGVTFSSDGRMLAT 113
V+ V+ S P H +I + S D T R++ ++E + VL H G+V V F ++ T
Sbjct: 419 VWEVSVSRPGHPIIGTASADHTARIY--SIETGACVLTYGGHQGSVNAVRFHPGQDLVLT 246
Query: 114 CSDDKTVKIW 123
S D T +W
Sbjct: 245 ASGDHTAHVW 216
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -1
Query: 29 TGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQ 82
T S D+ +++ + + GH+ V +V F P L+ + S D T +W+
Sbjct: 374 TASADHTARIYSIETGACVLTYGGHQGSVNAVRFHPGQDLVLTASGDHTAHVWR 213
>21763
Length = 923
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 4/158 (2%)
Frame = +1
Query: 95 HTGTVRGVTFSSDGRMLATC--SDDKTVKIWSVATQKFAFT-LTGHQNWVRCVHISPDGR 151
H V VT+ + G AT DK ++ + ++K + + + + ++CV P R
Sbjct: 181 HPKEVSKVTWHAKGDYFATVMPKGDKMSVLFHLLSKKHSQSPFSQSKGLIQCVKFHP-LR 357
Query: 152 LAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDL-R 210
R VRI++L +++ V+ + +++ HP G + GS D +DL
Sbjct: 358 PIFFVASQRFVRIYNLLTQQFVKKLQTNCKWISSMDVHPGGDNVIIGSYDCKSCWFDLDL 537
Query: 211 SNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKV 248
S + R H V H+S+H S+S D ++ V
Sbjct: 538 STKPYKILRHHKRAVRHVSYHHRYPLFASASDDGSIIV 651
>20271
Length = 567
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 12/165 (7%)
Frame = -1
Query: 130 FAFTLTGHQNWVRCVHISPDGRLAVSGGD-----DRTVRIWDLNSKKVVRT-FEDPTGLT 183
+ T+ G QN + +S DG+L D ++ + SK V T F +G
Sbjct: 558 YCITVVGTQNAHNLISVSNDGKLCSWSLDMLSQPQDSMELQHKQSKSVAATCFSFLSGDA 379
Query: 184 NTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGN------FL 237
N + + S S S + + Y H GP+T + H F
Sbjct: 378 NNFIVGSEECLVYSASRHGS-------KAGINEAYEGHQGPITAIDTHHAAGQIDFSPFF 220
Query: 238 LSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGDYFASC 282
L++S D T+K+W+++E + + + + + +SP SC
Sbjct: 219 LTASFDWTVKLWNIKEQKYVCSFEDNSDYVSDVQWSPTNPALFSC 85
Score = 31.2 bits (69), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Frame = -1
Query: 87 GKSTVLKAHTGTVRGV-TFSSDGRM-----LATCSDDKTVKIWSVATQKFAFTLTGHQNW 140
G + + H G + + T + G++ T S D TVK+W++ QK+ + + ++
Sbjct: 312 GINEAYEGHQGPITAIDTHHAAGQIDFSPFFLTASFDWTVKLWNIKEQKYVCSFEDNSDY 133
Query: 141 VRCVHISPDGRLAVSGGDDR-TVRIWDLNSKKVVRT 175
V V SP S D + +W LN + V T
Sbjct: 132 VSDVQWSPTNPALFSCVDIMGRLDLWHLNHETEVPT 25
>12841
Length = 1364
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +1
Query: 215 LQHYRAHTGPVTHLSFHP-TGNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFS 273
L+ Y HT PV H+ + P + LS S D ++++W + T H + +S
Sbjct: 1027 LETYSGHTAPVYHIRWSPFVSDIFLSCSADWSIRLWHQDRTTPILTFHSSTKTVHDVCWS 1206
Query: 274 PAGDYFASCGADEQVMVW 291
P +C + V VW
Sbjct: 1207 PRSSTVFACVHEGAVEVW 1260
>27059
Length = 411
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Frame = +2
Query: 186 VSFHPD-GTCIASGSTDNSIKLWDLRSNVLLQHY-------RAHTGPVTHLSFHPTGNFL 237
+ F PD CI S +N++++ ++ + + + + ++ TGNF+
Sbjct: 8 IKFSPDDKACIVSLGIENTLRVMKIKKETNTYSFTTCADFPKIISAEIINIGIASTGNFI 187
Query: 238 LSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGDY 278
++ +TT+ +W L+ G+LL T+ SP G +
Sbjct: 188 MTCHSNTTMAIWSLK-GELLQTIDTGNMVNYFGVVSPCGRF 307
>21960
Length = 756
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 142 RCVHISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFE-DPTGLTNTVSFHPDGTCIASGST 200
R P +SG DD + WD N++ V + D G+ N + HP +A+
Sbjct: 376 RVNFFGPHSEHIISGSDDGNIFYWDKNTEAVTNFMKGDDAGVVNCLEQHPTMPVLATSGL 555
Query: 201 DNSIKLW 207
D+++K+W
Sbjct: 556 DHNVKIW 576
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 188 FHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAH-TGPVTHLSFHPTGNFLLSSSLDTTL 246
F P I SGS D +I WD + + + G V L HPT L +S LD +
Sbjct: 388 FGPHSEHIISGSDDGNIFYWDKNTEAVTNFMKGDDAGVVNCLEQHPTMPVLATSGLDHNV 567
Query: 247 KVW 249
K+W
Sbjct: 568 KIW 576
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 15/145 (10%)
Frame = +1
Query: 15 VTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAG-----HKAGVYSVA--FSPVHA 67
+T +NH+ +++ D + + +PQL+ R + HK + F P
Sbjct: 229 ITCAVYNHSGSEILASYSDAAIYLL*-QPQLQGRRISALLRRPHK*PYHQRVNFFGPHSE 405
Query: 68 LIASGSKDRTVRLWQPTVEGKSTVLKA-HTGTVRGVTFSSDGRMLATCSDDKTVKIWSVA 126
I SGS D + W E + +K G V + +LAT D VKIW+ +
Sbjct: 406 HIISGSDDGNIFYWDKNTEAVTNFMKGDDAGVVNCLEQHPTMPVLATSGLDHNVKIWTPS 585
Query: 127 TQ-------KFAFTLTGHQNWVRCV 144
+ A T H+N+ R V
Sbjct: 586 AKPETEVPCSEALKETLHRNFRRNV 660
>33180
Length = 460
Score = 37.0 bits (84), Expect(2) = 0.004, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = -2
Query: 11 HKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHA-LI 69
H + S+ F+ + ++V G+ D C+ V++ + R + H V +VAF+ + ++
Sbjct: 456 HSFCIFSLMFSSDNTEIVGGANDGCLYVYDRESNQRTLKIDAHDDDVNAVAFADDSSQIL 277
Query: 70 ASGSKDRTVRLW 81
SG D ++W
Sbjct: 276 YSGGDDGLCKVW 241
Score = 20.8 bits (42), Expect(2) = 0.004, Method: Compositional matrix adjust.
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 110 MLATCSDDKTVKIWSV 125
+L + S D+T+K+W V
Sbjct: 142 LLLSNSKDQTIKLWDV 95
Score = 33.1 bits (74), Expect(2) = 0.006, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Frame = -2
Query: 95 HTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDG-RLA 153
H+ + + FSSD + ++D + ++ + + + H + V V + D ++
Sbjct: 456 HSFCIFSLMFSSDNTEIVGGANDGCLYVYDRESNQRTLKIDAHDDDVNAVAFADDSSQIL 277
Query: 154 VSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDG 192
SGGDD ++WD ++ +R ED ++ H DG
Sbjct: 276 YSGGDDGLCKVWD---RRTLR--EDNPLPVGIMAGHSDG 175
Score = 23.9 bits (50), Expect(2) = 0.006, Method: Compositional matrix adjust.
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 195 IASGSTDNSIKLWDLR 210
+ S S D +IKLWD+R
Sbjct: 139 LLSNSKDQTIKLWDVR 92
>38177
Length = 430
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%)
Frame = +3
Query: 60 VAFSPVHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKT 119
+A++P + +G+ LW T+L+AH +VR + +S+ + + T
Sbjct: 6 LAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDVSVRAMRWSNHDQWMVTADHSGY 185
Query: 120 VKIWSVATQKFAFTLTGHQNWVRCVHISPDGR 151
+K W GH+ +R V ++P GR
Sbjct: 186 IKYWQSNMNNVKM-FQGHKEPIRGVRLAPPGR 278
>15251
Length = 352
Score = 38.1 bits (87), Expect = 0.007, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 25/31 (80%)
Frame = +3
Query: 363 LAATLQHMVGQLDVLTQTIALLDERLTRNED 393
++ ++ + GQLD+LTQT++LL++RLT E+
Sbjct: 81 MSKFMEQIAGQLDILTQTVSLLEQRLTMTEN 173
>15745
Length = 1183
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 238 LSSSLDTTLKVWDLREGQLLYTLHGHEGA-TNGTAFSPAGDYF-ASCGADEQVMVWKT 293
++++ + T++ WDLR Q Y + G G F+P Y+ ASCG D +V W T
Sbjct: 629 IATANEATIRGWDLRSKQQTYQMEGAHGQLVRDLDFNPNRQYYLASCGDDCRVKFWDT 802
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Frame = +2
Query: 99 VRGVTFSSDGR---MLATCSDDKTVKIW------SVATQKFAFTLTGH-QNWVRCVHISP 148
V+G+ + G +L C D V +W S A Q TL G Q + C +P
Sbjct: 437 VKGILWHPTGDSQTVLGVCED--RVIMWDLNVASSSAQQTDMITLEGKGQPRLTCGRWNP 610
Query: 149 DGRLA-VSGGDDRTVRIWDLNSKKVVRTFEDPTG-LTNTVSFHPDGT-CIASGSTDNSIK 205
A ++ ++ T+R WDL SK+ E G L + F+P+ +AS D +K
Sbjct: 611 HHNCAQIATANEATIRGWDLRSKQQTYQMEGAHGQLVRDLDFNPNRQYYLASCGDDCRVK 790
Query: 206 LWDLRS 211
WD R+
Sbjct: 791 FWDTRN 808
>12140
Length = 727
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 78/198 (39%), Gaps = 36/198 (18%)
Frame = +2
Query: 46 RAFRFAGHKAGVYSVAFSP--VHALIASGSKDRTVRLWQPTVEGK---STVLKAHTGTVR 100
+ F ++ H + V SV F+P + ++A GS D ++ + T +G + AHT
Sbjct: 14 KLFEYSNHDSSVNSVCFAPHELGLILACGSSDGSLSIISTTGDGNWDSKKINNAHTIGCN 193
Query: 101 GVTFSSDG---------------RMLATCSDDKTVKIWS------VATQKFAFTLTGHQN 139
V+++ + + D VKIW V QK L GH +
Sbjct: 194 AVSWAPSTAPNALFDQSARQQPVKRFVSGGCDNLVKIWREDETGWVEDQK----LEGHSD 361
Query: 140 WVRCVHISPDGRLA----VSGGDDRTVRIW------DLNSKKVVRTFEDPTGLTNTVSFH 189
WVR V +P L S D V IW + + +++ F D + VS+
Sbjct: 362 WVRDVAWAPSIGLPRNVIASCSQDCRVIIWTNDGSSNQWTSRILNKFSD---VVWHVSWS 532
Query: 190 PDGTCIASGSTDNSIKLW 207
G +A DN + LW
Sbjct: 533 VTGNILAVSGGDNKVTLW 586
>24785
Length = 455
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 23/27 (85%)
Frame = +1
Query: 367 LQHMVGQLDVLTQTIALLDERLTRNED 393
++ + GQLD+LTQT++LL++RLT E+
Sbjct: 91 MEQIAGQLDILTQTVSLLEQRLTMTEN 171
>13890
Length = 630
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 24/174 (13%)
Frame = +1
Query: 62 FSPVHA-LIASGSKDRTVRLW---QPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSD- 116
F PV L+A+G+ D +++W P V + K G V+ V FS DG+ + +C D
Sbjct: 4 FHPVTPHLVATGTTD-CIQVWDVRHPEVPVRVLTHKEQLGQVQDVMFSHDGQEVFSCGDV 180
Query: 117 ------DKTVKIWSVAT----------QKFAFT-LTGHQNWVRCVHISPDGRLAVSGGDD 159
D+++ W T +++ T L H + + + G +AV
Sbjct: 181 VSRESSDRSIMAWDFRTGVILSNQIFQERYTVTRLMLHPYQSQFLAQTQAGYIAVFS--- 351
Query: 160 RTVRIWDLNSKKVVRTFE--DPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRS 211
T R + +N K FE G S DG+ + SGS+D + + +
Sbjct: 352 -TQRPYKMNKNK---RFEGHKTAGYNIGASLSQDGSIVYSGSSDGKLHCYSFNT 501
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 10/72 (13%)
Frame = +1
Query: 230 FHPTGNFLLSSSLDTTLKVWDLREGQLLYTLHGHE---GATNGTAFSPAGDYFASCG--- 283
FHP L+++ ++VWD+R ++ + H+ G FS G SCG
Sbjct: 4 FHPVTPHLVATGTTDCIQVWDVRHPEVPVRVLTHKEQLGQVQDVMFSHDGQEVFSCGDVV 183
Query: 284 ----ADEQVMVW 291
+D +M W
Sbjct: 184 SRESSDRSIMAW 219
>17807
Length = 484
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Frame = -2
Query: 149 DGRLAVSGGDDRTVRIWDLNSKKVV--RTFEDPTGLTNTVSFHPDGTCIASGSTD----- 201
D R +SG D +R+W++ KKV + L T SF +G G+ D
Sbjct: 426 DDRYFLSGSLDGKIRLWNIPDKKVTMWNELSGSSNLITTASFCHNGRLAVVGTYDGRCIF 247
Query: 202 ---NSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQLLY 258
+ +K + + + + A +T + P +L +S D+ ++++ L++ L
Sbjct: 246 YTTDQLKYYTMLNVRSTRGRNARGRKITGIEAMPGEEKILVTSNDSRVRLYSLKDLTLTC 67
Query: 259 TLHGHEGATNGT-----AFSPAGDY 278
++G TN + +FSP G Y
Sbjct: 66 K---YKGCTNNSSQIKASFSPTGKY 1
>04524
Length = 1340
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = -1
Query: 85 VEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKI--WSVATQKFAFTLTGHQNWVR 142
V+ +L H V V + + TC D+ +++ + A + L GH +V
Sbjct: 1061 VKTHGQLLLGHLSMVLDVCLTGREGHVVTCDRDEKIRVSQFPNAYNIHTYCL-GHTQFVN 885
Query: 143 CVHISPDGRLAVSGGDDRTVRIWDLNSKKV 172
C+ + R+ +SG D TVR W++ K++
Sbjct: 884 CLVYVEEFRVLISGSGDCTVRAWNMEGKQL 795
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Frame = -1
Query: 10 GHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFA-GHKAGVYSVAFSPVHAL 68
GH V VC +VT D + V F + GH V + + +
Sbjct: 1034 GHLSMVLDVCLTGREGHVVTCDRDEKIRVSQFPNAYNIHTYCLGHTQFVNCLVYVEEFRV 855
Query: 69 IASGSKDRTVRLWQPTVEGKSTVL 92
+ SGS D TVR W +EGK L
Sbjct: 854 LISGSGDCTVRAWN--MEGKQLCL 789
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = -1
Query: 52 GHKAGVYSVAFSPVHALIASGSKDRTVRLWQ-PTVEGKSTVLKAHTGTVRGVTFSSDGRM 110
GH + V V + + + +D +R+ Q P T HT V + + + R+
Sbjct: 1034 GHLSMVLDVCLTGREGHVVTCDRDEKIRVSQFPNAYNIHTYCLGHTQFVNCLVYVEEFRV 855
Query: 111 LATCSDDKTVKIWSVATQKFAF 132
L + S D TV+ W++ ++
Sbjct: 854 LISGSGDCTVRAWNMEGKQLCL 789
>03734
Length = 1963
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 20/184 (10%)
Frame = -2
Query: 141 VRCVHISPDGRLAVSGGDDRTVRIW--------DLNSKKVVRTFEDPTGL----TNTVSF 188
+ C ISPDG + V D +R++ L K V++ P L ++
Sbjct: 1311 ISCSTISPDGTVVVFS-DQEKLRMYKVHVTNLTSLTPKVEVKSVSLPPKLNKYPAQRLAI 1135
Query: 189 HPDGTCIASGSTDNSIKLWDLRSN--VLLQHYRAHTGP------VTHLSFHPTGNFLLSS 240
PD + S ++ +S+++WD+ + LL R T+L +S
Sbjct: 1134 TPDNRYLVSATSVSSLQIWDISDDKGTLLHTVRPEETEEEGRHSFTNLCVSDNSKMAATS 955
Query: 241 SLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWKTNFDRFLE 300
+ + ++ + EG++L L +F+ A +D +VM FD E
Sbjct: 954 NSGGQVHLYSIAEGEVLCKLPALSQQATAISFTXAARTLLVTYSDHKVM----EFDVQKE 787
Query: 301 DYTG 304
+Y+
Sbjct: 786 EYSA 775
>11915
Length = 737
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = +1
Query: 27 LVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSPVHAL-IASGSKDRTVRLWQPTV 85
L TG + + +WN + HKA V+ + F+ ++L + S S D TV+LW+
Sbjct: 451 LATGHVSGRIKLWNCETGKLLIEMMDHKATVHDLHFAADNSLCLMSASHDGTVKLWEFDD 630
Query: 86 EGKSTV---LKAHTGTVRGVTFSSDGRMLAT 113
+G + L+ + +S D R +AT
Sbjct: 631 QGDCNMYLTLRTNAKHAFSCRWSHDRRYVAT 723
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 110 MLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLA-VSGGDDRTVRIWDLN 168
+LAT +K+W+ T K + H+ V +H + D L +S D TV++W+ +
Sbjct: 448 VLATGHVSGRIKLWNCETGKLLIEMMDHKATVHDLHFAADNSLCLMSASHDGTVKLWEFD 627
Query: 169 SK 170
+
Sbjct: 628 DQ 633
>08872
Length = 466
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = -2
Query: 59 SVAFSPVHALIASGSKDRTVRLW-QPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDD 117
++AF P LIA G+K V+++ P VE S V K +GR+++ CSD+
Sbjct: 411 ALAFDPKLKLIAIGTKSGAVKVYGAPGVEF-SGVHKEDVSVTNLFFLPEEGRLVSVCSDN 235
Query: 118 KTVKIWSV 125
T+ +W +
Sbjct: 234 -TLHLWEI 214
>10264
Length = 416
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = -1
Query: 6 RSFRGHKDAVTSVCFN-HNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSVAFSP 64
R GH VT + ++ H+ +LV+ D VW+ + +F GH + + FS
Sbjct: 263 RELSGHSQRVTDMSWSPHHDARLVSVGYDAEAFVWDVQKGTALAQFKGHMGRLLTCQFSG 84
Query: 65 VHA-LIASGSKDRTVRLWQ 82
+ L+ +G D +V +W+
Sbjct: 83 LDPDLVMTGGSDASVHVWR 27
Score = 34.7 bits (78), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = -1
Query: 215 LQHYRAHTGPVTHLSFHPTGNF-LLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFS 273
L+ H+ VT +S+ P + L+S D VWD+++G L GH G FS
Sbjct: 266 LRELSGHSQRVTDMSWSPHHDARLVSVGYDAEAFVWDVQKGTALAQFKGHMGRLLTCQFS 87
Query: 274 PAG-DYFASCGADEQVMVWKTN 294
D + G+D V VW+ +
Sbjct: 86 GLDPDLVMTGGSDASVHVWRVS 21
>05642
Length = 445
Score = 34.7 bits (78), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -1
Query: 146 ISPDGRLAVSGGDDRTVRIWDLNSKKVVRTFEDPTGL-TNTVSFHPDGTCIASGSTDNSI 204
++ + L VSG +D V WDL K+V T + T +++SFH C+ + D +
Sbjct: 385 LNNEDTLVVSGSEDGKVYFWDLVEAKLVDTLDHKTTRPVHSLSFHHAELCLMTACADK-V 209
Query: 205 KLW 207
LW
Sbjct: 208 FLW 200
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Frame = -1
Query: 191 DGTCIASGSTDNSIKLWDLRSNVL---LQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLK 247
+ T + SGS D + WDL L L H T PV LSFH L+++ D K
Sbjct: 376 EDTLVVSGSEDGKVYFWDLVEAKLVDTLDHKT--TRPVHSLSFHHAELCLMTACAD---K 212
Query: 248 VWDLREGQLLYTLHGHEGATNGTAFSPAGDYF 279
V+ R Q T GH +T F + +F
Sbjct: 211 VFLWRSSQPDNT*PGHFSSTFLVVFCFSISFF 116
>06576
Length = 1547
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 18/139 (12%)
Frame = -2
Query: 56 GVYSVAFSPV--------HALIASGSKDRTVRLWQPTVE--GKSTVLKAHTGTVRGVTFS 105
GV +A+SP H A+ D +VR++ ++ K+ V+K HT V VTFS
Sbjct: 1234 GVSCLAWSPSTSLSSLDKHLCFAAACDDHSVRVFTSDLKTTNKTHVVKGHTDFVNSVTFS 1055
Query: 106 -SDGRMLATCSDDKTVKIWSVAT-------QKFAFTLTGHQNWVRCVHISPDGRLAVSGG 157
++ + + DD T ++W+ + F LT V C H +L V G
Sbjct: 1054 PTEEDQVXSTGDDLTCRVWTGKDGQDGRYGESVIFRLTAPGMAV-CWHADEPLKLMV-GQ 881
Query: 158 DDRTVRIWDLNSKKVVRTF 176
D +R + L++++ + +
Sbjct: 880 KDGIIRFFSLSNQQPIMSL 824
>34005
Length = 456
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = +1
Query: 186 VSFHPDGTCIASGSTDNSIKLWD--LRSNVLLQH-YRAHTGPVTHLSFHPTGNFLLSS-- 240
+S+ PD T +ASGS DNS+ +WD L +V H +H V +++ P +L++
Sbjct: 130 LSWSPDATFLASGSNDNSVNIWDSTLGMDVPPLHTLTSHQAAVKAVAWCPWQTRMLATGG 309
Query: 241 -SLDTTLKVWDLREGQLL 257
+ D ++ W+ G +
Sbjct: 310 GTNDRHIRFWNTNTGACV 363
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +1
Query: 57 VYSVAFSPVHALIASGSKDRTVRLWQPTVEGKST---VLKAHTGTVRGVTFSS-DGRMLA 112
V +++SP +ASGS D +V +W T+ L +H V+ V + RMLA
Sbjct: 121 VCGLSWSPDATFLASGSNDNSVNIWDSTLGMDVPPLHTLTSHQAAVKAVAWCPWQTRMLA 300
Query: 113 T--CSDDKTVKIWSVAT 127
T ++D+ ++ W+ T
Sbjct: 301 TGGGTNDRHIRFWNTNT 351
>07665
Length = 435
Score = 34.3 bits (77), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Frame = -2
Query: 123 WSVATQKFAFTLTGHQNWVRCVHISPDGR-LAVSGGDDRTVRIWDLNSKKVVRTF----- 176
W + K +TL H + + + SP+ L V+ G +++IWDL KK V
Sbjct: 392 WDLNDGKNLYTLE-HNDIINALCFSPNRYWLCVAYGP--SIKIWDLACKKTVEELRPEVV 222
Query: 177 ------EDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDL 209
E P L+ +++ DG + +G +DN+I++W +
Sbjct: 221 SPTSKAEQPQCLS--LAWSTDGQTLFAGYSDNTIRVWQV 111
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Frame = -2
Query: 86 EGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTL-------TGHQ 138
+GK+ H + + FS + R + ++KIW +A +K L T
Sbjct: 380 DGKNLYTLEHNDIINALCFSPN-RYWLCVAYGPSIKIWDLACKKTVEELRPEVVSPTSKA 204
Query: 139 NWVRCVHI--SPDGRLAVSGGDDRTVRIWDLN 168
+C+ + S DG+ +G D T+R+W ++
Sbjct: 203 EQPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 108
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = -2
Query: 249 WDLREGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWKTNFDRFLEDYTGVSVA 308
WDL +G+ LYTL H N FSP Y+ + +W + +E+ V+
Sbjct: 392 WDLNDGKNLYTLE-HNDIINALCFSP-NRYWLCVAYGPSIKIWDLACKKTVEELRPEVVS 219
Query: 309 KQTRTD 314
++ +
Sbjct: 218 PTSKAE 201
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Frame = -2
Query: 11 HKDAVTSVCFNHNMKQLVTGSLDNCVMVWNF---------KPQLRAFRFAGHKAGVYSVA 61
H D + ++CF+ N L + + +W+ +P++ + + S+A
Sbjct: 353 HNDIINALCFSPNRYWLCVAYGPS-IKIWDLACKKTVEELRPEVVSPTSKAEQPQCLSLA 177
Query: 62 FSPVHALIASGSKDRTVRLWQPTVEG 87
+S + +G D T+R+WQ +V
Sbjct: 176 WSTDGQTLFAGYSDNTIRVWQVSVSA 99
>35695
Length = 1651
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = -1
Query: 203 SIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTG-NFLLSSSLDTTLKVWDLREGQLLYTLH 261
++ +WD++ +++ AH G + L+ G N ++SSS+D T+ VW+ ++L +H
Sbjct: 1642 NLYVWDVKQGNMVKTLDAHFGRIIALTSVTVGCNMVISSSIDKTINVWNF--DKILEEVH 1469
Query: 262 GHEGATN--GTAFSPAGDYFASCGADEQVMVWKTNFDRFLEDYTGVS 306
+ T A Q VW R ++ G S
Sbjct: 1468 PLDRMERPIETVHMAASSSLCVATTRNQTSVWDLETGRLVKVLVGSS 1328
>03044
Length = 1952
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 49/127 (38%), Gaps = 6/127 (4%)
Frame = -2
Query: 81 WQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFA--FTLTGHQ 138
WQ T L H V G+ ++ + TC D+ +W+ K+ +
Sbjct: 1684 WQET-----DTLGEHGQRVTGIDWAPKSNRIVTCGADRNAYVWTYQDGKWQPHLVILRIN 1520
Query: 139 NWVRCVHISPDGRLAVSGGDDRTVRIWDLNSKK---VVRTFEDPTGLTNT-VSFHPDGTC 194
CV SP+ G R + + + V + + P T T + +HP+
Sbjct: 1519 RAATCVKWSPEENKFAVGSSARLISVSYYEEEHRWWVSKHIKKPIRSTVTCLDWHPNNIL 1340
Query: 195 IASGSTD 201
IA+GSTD
Sbjct: 1339 IAAGSTD 1319
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = -2
Query: 57 VYSVAFSPVHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSD 116
V++V+FSP IA + D +V + T++ + V+K G+T+ S+ M+A D
Sbjct: 1192 VHAVSFSPSGEKIAWVAHDSSVSVGDSTMQNRLVVIKDTFLPFMGITWVSENSMVAAGYD 1013
>31054
Length = 392
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -2
Query: 120 VKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWD 166
VK W F L+GH + + ++ DG L VSG D+ T+ +WD
Sbjct: 343 VKQWKFPDGNFIQNLSGHNAIINTLAVNSDGVL-VSGADNGTMHLWD 206
>30108
Length = 1032
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = +1
Query: 188 FHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSS-LDTTL 246
+H + T +A+ + +S+++ LQH H P+THL++ P+ N LLS+S +DT +
Sbjct: 307 WHIEPTSLAARPSSSSVQV--------LQH-SGHC-PITHLAWLPSANILLSASPVDTAV 456
Query: 247 KVWDL--REGQLLYTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWKTN 294
W + L L G G + A SP G + VW T
Sbjct: 457 MAWSVGGEACTALRYLGG--GGVSLLACSPDGSKVMAATPATLFRVWDTT 600
>13509
Length = 572
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 184 NTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGN-FLLSSSL 242
N +SFHP +++ +D WD + L+ P+T +F+ GN F +SS
Sbjct: 371 NDISFHPVHGTLSTVGSDGRFSFWDKDARTKLKTSEQFDQPITTCNFNAQGNIFAYASSY 550
Query: 243 D 243
D
Sbjct: 551 D 553
>25400
Length = 462
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 195 IASGSTDNSIKLWDLRSNVLLQHYRA-HTGPVTHLSFHPTGNFLLSSSLDTTLKVWD 250
+ SG +I ++DL + +++ H V +S+HP N L+SSS D T+ WD
Sbjct: 6 VYSGCATGTILIYDLLTGRVVRKLDGGHRSCVRDVSWHPYTNTLISSSWDGTVGKWD 176
Score = 27.7 bits (60), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 161 TVRIWDLNSKKVVRTFEDP-TGLTNTVSFHPDGTCIASGSTDNSIKLWD 208
T+ I+DL + +VVR + VS+HP + S S D ++ WD
Sbjct: 30 TILIYDLLTGRVVRKLDGGHRSCVRDVSWHPYTNTLISSSWDGTVGKWD 176
>30679
Length = 1025
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 7/111 (6%)
Frame = +1
Query: 152 LAVSGGDDRTVRIWDLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRS 211
+ +S G D +W++ + V + T ++S++ G+ A+ S D ++ D R+
Sbjct: 4 ILLSAGFDYKCVVWNVEQAEPVNIVDCHTDTIFSMSWNRXGSMFATTSKDKKLRTIDPRT 183
Query: 212 NVLLQHYRAHTGP-------VTHLSFHPTGNFLLSSSLDTTLKVWDLREGQ 255
+ + H GP ++ TG + S L +WDLR+ +
Sbjct: 184 TTVAAESQCHKGPKASKVVFADNVKLTTTGFAQMGSR---ELSLWDLRKSK 327
>27525
Length = 828
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/92 (20%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Frame = +2
Query: 166 DLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLL-----QHYRA 220
D++ ++ +F+ N +SF PDG+ +A G D + ++ + + L+ R
Sbjct: 26 DMDGREPRNSFQVGQAQINAISFSPDGSQLAVGCHDGFVHVYVVHEDGLVFRQKSAALRY 205
Query: 221 HTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLR 252
++ + HL + +L + D L W+++
Sbjct: 206 NSTFIMHLDWSSDCRYLQCTLGDYELVFWEVQ 301
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Frame = +2
Query: 50 FAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQPTVEG-----KSTVLKAHTGTVRGVTF 104
F +A + +++FSP + +A G D V ++ +G KS L+ ++ + + +
Sbjct: 56 FQVGQAQINAISFSPDGSQLAVGCHDGFVHVYVVHEDGLVFRQKSAALRYNSTFIMHLDW 235
Query: 105 SSDGRMLATCSDDKTVKIWSVATQK 129
SSD R L D + W V K
Sbjct: 236 SSDCRYLQCTLGDYELVFWEVQNMK 310
>06799
Length = 616
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 67/161 (41%), Gaps = 14/161 (8%)
Frame = +3
Query: 106 SDGRMLATCSDDKTVKIWSVATQK--FAFTLTGHQNWVRCVHISPDGRLAVSGGDDRTVR 163
++G ++ C+DD T+ +W+ +K +L + + H+ + G + V
Sbjct: 15 NEGALVTVCADD-TLHLWNYRQKKPEIVHSLKFQRERITYCHLPFQSKWLYIGTERGNVH 191
Query: 164 IWDLNS-----------KKVVRTFEDPTGLTNTVSFHP-DGTCIASGSTDNSIKLWDLRS 211
I ++ S K + + + G +S +P D + G +I LWDLRS
Sbjct: 192 IVNIESFILSGYIINWNKAIELSRKTHPGPVVHLSDNPVDSNKLLIGFESGAIVLWDLRS 371
Query: 212 NVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVWDLR 252
Y + + +++H G + S D +L W+L+
Sbjct: 372 KAAECRYNSPEA-LRSIAWHFEGKQFMCSHSDGSLTTWNLK 491
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +3
Query: 219 RAHTGPVTHLSFHPT-GNFLLSSSLDTTLKVWDLREGQLLYTLHGHEGATNGTAFSPAGD 277
+ H GPV HLS +P N LL + +WDLR + E A A+ G
Sbjct: 264 KTHPGPVVHLSDNPVDSNKLLIGFESGAIVLWDLRSKAAECRYNSPE-ALRSIAWHFEGK 440
Query: 278 YFASCGADEQVMVW 291
F +D + W
Sbjct: 441 QFMCSHSDGSLTTW 482
>05303
Length = 782
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 45/121 (37%), Gaps = 15/121 (12%)
Frame = -3
Query: 6 RSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAG--------- 56
R F H ++ N + + G DN V +WN + +G
Sbjct: 714 RKFFAHTESDCVALINESY--FIMGGQDNSVSLWNVNKKKALVCVTSAHSGCSQIEGSKG 541
Query: 57 ---VYSVAFSPVHALIASGSKDRTVRLWQPTVEGKSTVLKAHT---GTVRGVTFSSDGRM 110
+ +VA L+A+GSKD +RLWQ + V G V + FSS G
Sbjct: 540 ENWITAVASLQFTDLVATGSKDGCIRLWQCSANFHHLVPLXSVPVPGFVNSLKFSSKGDF 361
Query: 111 L 111
L
Sbjct: 360 L 358
>22113
Length = 614
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +3
Query: 258 YTLHGHEGATNGTAFSPAGDYFASCGADEQVMVWKTNFDRFLEDYTGVSVAKQTRTDPLI 317
Y LH HE F+ G +F S G D + W+T + G S+ + T ++
Sbjct: 84 YQLHLHESCVLSLRFATCGKWFVSTGKDNLLNAWRTPY--------GASIFQSKETSSVL 239
Query: 318 S 318
S
Sbjct: 240 S 242
>07542
Length = 1027
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 204 IKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSSL-DTTLKVWDLREGQ-LLYTLH 261
+ ++D+ L + G +TH++F GN+L + D + +D+R + +LY L+
Sbjct: 16 VAIYDVPHGGLTAVFEGQPGGITHVAFSKDGNYLFAGGRKDPEINCFDIRNPEKILYVLY 195
Query: 262 GH 263
H
Sbjct: 196 RH 201
>36111
Length = 687
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 57 VYSVAFSPVHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCS 115
V +VAF V+ A+G D V +W + + + ++ + FS DG +LA S
Sbjct: 239 VNAVAFHNVYNTFATGGSDGYVNIWDGFHKKRLCXFHRYPTSIASLAFSHDGNVLAIAS 415
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +2
Query: 183 TNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLSFHPTGNFLLSSS 241
N V+FH A+G +D + +WD L + + + L+F GN L +S
Sbjct: 239 VNAVAFHNVYNTFATGGSDGYVNIWDGFHKKRLCXFHRYPTSIASLAFSHDGNVLAIAS 415
>30297
Length = 822
Score = 31.2 bits (69), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 12/112 (10%)
Frame = -1
Query: 150 GRLAVSGGDDRTVRIW--DLNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLW 207
G + SG R W L SK P G+ + ++ + T + S + I +W
Sbjct: 459 GPTSTSGTSSRAAASWHSSLGSKS-------PGGMVSAMATNKANTLLYSADSLGFIYVW 301
Query: 208 DLRSNVL----------LQHYRAHTGPVTHLSFHPTGNFLLSSSLDTTLKVW 249
D+ L +Q +R H V+ L LL+S+ D T+++W
Sbjct: 300 DISQYCLETPETDSPDVIQSWRGHVESVSCLDLVEQNKVLLTSAADCTVRMW 145
>07151
Length = 512
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 141 VRCVHISPDGRLAVSGGDDRTVRIWD 166
V+C S D + V+GG DR +R+W+
Sbjct: 155 VKCFDFSKDKNIIVTGGMDRIIRLWN 78
>13486
Length = 1509
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -1
Query: 80 LWQPTVEGKSTV--LKAHTGTVRGVTFSSDGRMLATCSDDKTVKIW 123
L+ T E KS V L H+ V V F+ D +LA+C V IW
Sbjct: 954 LFDVTKESKSCVNKLLGHSAPVLDVCFNCDESLLASCDAQGMVIIW 817
>06563
Length = 2303
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Frame = -2
Query: 98 TVRGVTFSSDGRMLATCSDDKTVKIWSVATQKFAFTLTGHQNWVRCVHISPDGRLAVS-- 155
T + + +S+DGR+LA + D V + V+T L Q V + SP G + +
Sbjct: 2206 TCKAMAYSADGRLLAWATAD-CVYVMXVSTYTVKQQL--QQTRVAELMFSPRGSVLATWG 2036
Query: 156 ---------GGDDRTVRIWDLNSKKVVRTF 176
GG+ V IWD S V++TF
Sbjct: 2035 PFYMDRDGKGGEPNMV-IWDXASGNVLKTF 1949
>08679
Length = 2028
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Frame = -3
Query: 228 LSFHPTG-NFLLSSSLDTTLKVWDLRE------GQLLYTLHGHEGATNGTAFSP-AGDYF 279
+S HPT +F +++ D VWDLR+ + L+++ H + FSP G
Sbjct: 1525 VSVHPTNPHFFVTAGSDMKXSVWDLRKLSASKGNEPLHSMM-HGKTVSSAYFSPLTGARI 1349
Query: 280 ASCGADEQVMVWK 292
SC AD+ + V+
Sbjct: 1348 LSCSADDTLNVFN 1310
>01557
Length = 953
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +2
Query: 197 SGSTDNSIKLWDLRSNVLLQHYR---AHTGPVTHLSFHP-TGNFLLSSSLDTTLKVWDLR 252
S DN++ +WDL L YR AHT +T L+ T L++ ++WDLR
Sbjct: 275 STCLDNTLNVWDLSGADLCSVYRARAAHTNKLTGLALSATTAAQLITCDRGGCARLWDLR 454
>21996
Length = 1039
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 167 LNSKKVVRTFEDPTGLTNTVSFHPDGTCIASGSTDNSIKLWDLRSNVLLQHYR 219
LN K V R+F +S+H + + +T+N +KLW + +LL+H +
Sbjct: 672 LNVKYVERSF---------MSYHEKQIRLEN*NTENHLKLWAPKVMILLKHVK 803
>37142
Length = 327
Score = 28.5 bits (62), Expect = 4.7, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Frame = +2
Query: 195 IASGSTDNSI------KLWDLRSNVLLQHYRAHTGPVTHLSFHP-TGNFLLSSSLDTTLK 247
I G+ + S+ K+ D ++ + HTG V L F+P N L S + ++ +
Sbjct: 5 IVGGADNGSVLVYSAQKMIDGDADCSVLQLTKHTGAVKALDFNPFQTNLLASGASESEIY 184
Query: 248 VWDLRE 253
+WDL +
Sbjct: 185 IWDLNK 202
>04358
Length = 2430
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 136 GHQNWVRCVHISPDGRLAVSGGDDRTVRIW 165
GH + VRC+H + V+GG+D + +W
Sbjct: 2140 GHTDTVRCLHWDKQTQTLVTGGEDSMLCLW 2229
>27475
Length = 369
Score = 28.1 bits (61), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 2/93 (2%)
Frame = +2
Query: 166 DLNSKKVVRTFEDPTGLTNTVSFHPDGT-CIASGSTDNSIKLWDLRS-NVLLQHYRAHTG 223
D + V F TG V + P SGS DN +KLWD RS L H
Sbjct: 26 DTEGETVKCAFTSHTGWVTGVDWSPTREHLFLSGSYDNVLKLWDTRSPKATLYDMNWHED 205
Query: 224 PVTHLSFHPTGNFLLSSSLDTTLKVWDLREGQL 256
+ + + LLS +D L V+ +L
Sbjct: 206 RILAVDW-SIPELLLSGGVDNKLHVFSYSSAKL 301
>34511
Length = 1037
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 134 LTGHQNWVRCVHISPDGRLAVSGGDDRTVRIWD 166
L GH N V C+ ++ +G +G D +R+W+
Sbjct: 60 LAGHDNRVSCLGVTENGMSVATGSWDSFLRVWN 158
>28289
Length = 349
Score = 27.7 bits (60), Expect = 8.8, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 3 TLERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVW 39
++ +S GH AV V +N + ++L T ++VW
Sbjct: 259 SMNQSLEGHSGAVQVVAWNEHHQKLTTSDQYGLIIVW 149
>20615
Length = 641
Score = 27.7 bits (60), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +1
Query: 57 VYSVAFSPVHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLATCSD 116
V+SV+FSP IA D +V + E + V+K GVT+ S+ M+A D
Sbjct: 172 VHSVSFSPSGERIAWVGHDSSVSVADSANENRLVVIKDTFLPFMGVTWVSENSMVAAGFD 351
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158278944|gb|EDP04706.1| DnaJ-like protein
[Chlamydomonas reinhardtii]
(431 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
14550 91 6e-28
20488 91 7e-19
10680 90 2e-18
12040 73 2e-13
13998 45 7e-05
02324 44 2e-04
02088 36 0.039
18150 32 0.45
38321 29 4.4
20155 28 5.7
>14550
Length = 1395
Score = 90.9 bits (224), Expect(2) = 6e-28, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 101/232 (43%), Gaps = 2/232 (0%)
Frame = -2
Query: 125 DVVHKLQVPLEDLYAGGTKKLSMSRQLPCDGCXXXXXXXXXRYECNTCQGTGVQVHLRPL 184
DVV L V LE+LY+G + + R P R E T Q L
Sbjct: 809 DVVMDLDVTLEELYSGDF--VEVLRYKPVSKPAKGKRKCNCRMETVTQQ----------L 666
Query: 185 GPGMMQQIQSRCSGCAGSGYNCPPSDSCTACKGKCLVSDKKTFEVHIEPGMKHGSRIVLR 244
GPG Q Q + C C V ++K EV IEPGM+ G
Sbjct: 665 GPGRFQMSQQQV---------------CDECPNIKFVPEEKVLEVEIEPGMRDGQEYPFV 531
Query: 245 GEAGCTEPGL--APGDIILVIVQKEHDVFQRAGVDLVMERHISLREALTGCTFNFKHLDG 302
E EP + PGD+ +I Q +H F+R G DL +SL++AL G + HLDG
Sbjct: 530 AEG---EPHMDGEPGDLRFIIRQVKHARFERKGDDLYTNVTVSLQDALIGFEMDIVHLDG 360
Query: 303 RLLRVTIPEGEVIKPGTFKCLPDEGMPFQGRPFMKGNMYVRFNVDFPESVTS 354
+V + ++ PG +EGMP +KG++++ F++DFP+ S
Sbjct: 359 H--KVHVIRDKITWPGARMRKSNEGMPNYENNNVKGSLFITFDIDFPKGTLS 210
Score = 51.6 bits (122), Expect(2) = 6e-28, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Frame = -1
Query: 21 YYELLGVSKDADPDEIXXXXXXXXXXXXPDKG-GDPD---KFKEINEAYDVLKDPKKREI 76
+Y++LGVSK AD +I PDK DP+ +F+++ AY+VL D +KR++
Sbjct: 1131 FYKILGVSKSADTKQIKRAYRKIAKELHPDKNRDDPEAEQRFQDLGAAYEVLSDEEKRKV 952
Query: 77 YDQYGEDAIKE 87
YD++GE+ +K+
Sbjct: 951 YDRHGEEGLKQ 919
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -1
Query: 325 DEGMPFQGRPFMKGNMYVRFNVDFPESVTS 354
+EGMP +KG++++ F++DFP+ S
Sbjct: 1383 NEGMPNYENNNVKGSLFITFDIDFPKGTLS 1294
>20488
Length = 3281
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 72/129 (55%)
Frame = -2
Query: 225 KTFEVHIEPGMKHGSRIVLRGEAGCTEPGLAPGDIILVIVQKEHDVFQRAGVDLVMERHI 284
K + ++ G K G++I E G P P DI+ ++ K H F+R G++L+ ++
Sbjct: 1585 KILTITVKKGWKPGTKITFPKE-GDQGPNNVPADIVFIVKDKPHPRFRREGLNLIHTANV 1409
Query: 285 SLREALTGCTFNFKHLDGRLLRVTIPEGEVIKPGTFKCLPDEGMPFQGRPFMKGNMYVRF 344
L ALTG T + LD R L IP +++KPG K +P EGMP P KG++ + F
Sbjct: 1408 LLGRALTGTTVDIHTLDDRTLH--IPINDIVKPGYKKIVPGEGMPMSSDPTZKGDLIIEF 1235
Query: 345 NVDFPESVT 353
N++FP S+T
Sbjct: 1234 NIEFPTSLT 1208
>10680
Length = 1093
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 72/129 (55%)
Frame = -3
Query: 225 KTFEVHIEPGMKHGSRIVLRGEAGCTEPGLAPGDIILVIVQKEHDVFQRAGVDLVMERHI 284
K + ++ G K G++I E G P P DI+ ++ K H F+R G++L+ ++
Sbjct: 728 KILTITVKKGWKPGTKITFPKE-GDQGPNNVPADIVFIVKDKPHPRFRREGLNLIHTANV 552
Query: 285 SLREALTGCTFNFKHLDGRLLRVTIPEGEVIKPGTFKCLPDEGMPFQGRPFMKGNMYVRF 344
L ALTG T + LD R L IP +++KPG K +P EGMP P KG++ + F
Sbjct: 551 LLGRALTGTTVDIHTLDDRTLH--IPINDIVKPGYKKIVPGEGMPMSSDPTQKGDLIIEF 378
Query: 345 NVDFPESVT 353
N++FP S+T
Sbjct: 377 NIEFPTSLT 351
>12040
Length = 1151
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 55/95 (57%)
Frame = -2
Query: 258 DIILVIVQKEHDVFQRAGVDLVMERHISLREALTGCTFNFKHLDGRLLRVTIPEGEVIKP 317
DII+++ +KEH F AG DL+M+ + L EAL G K +D R L V GEVI+
Sbjct: 1150 DIIILLDEKEHSTFVHAGTDLMMKMPLQLVEALCGFQRIVKTMDDRDLLVATQPGEVIRH 971
Query: 318 GTFKCLPDEGMPFQGRPFMKGNMYVRFNVDFPESV 352
KC+ +EGMP P KG + ++F V FP+ +
Sbjct: 970 EMTKCIAEEGMPIFKNPMEKGTLIIQFEVIFPDVI 866
>13998
Length = 1075
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Frame = +1
Query: 14 KKSNNSRYYELLGVSKDADPDEIXXXXXXXXXXXXPDKGGDPD---------KFKEINEA 64
KKS YY++LG+S++A DEI PD+ + KFKE+ EA
Sbjct: 187 KKSKRKDYYKILGISRNATEDEIKKAYRKKALVHHPDRHANSSADVRKDEELKFKEVGEA 366
Query: 65 YDVLKDPKKREIYD 78
Y +L D K+ YD
Sbjct: 367 YAILSDGAKKTRYD 408
>02324
Length = 2058
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Frame = +2
Query: 21 YYELLGVSKDADPDEIXXXXXXXXXXXXPDKGGDP-----DKFKEINEAYDVLKDPKKRE 75
+YE+LGV + AD D++ PDK D +F+ + +AY++L DP++R
Sbjct: 107 HYEVLGVERSADNDDLKKAYRKLALKFHPDKNPDSVEEATAQFRLVQQAYEILTDPQERS 286
Query: 76 IYDQYGEDAIK 86
YD++ E ++
Sbjct: 287 WYDRHREAILR 319
>02088
Length = 1062
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Frame = +3
Query: 22 YELLGVSKDADPDEIXXXXXXXXXXXXPD------KGGDPDKFKEINEAYDVLKDPKKRE 75
YE++G+ ++A P E+ PD K KF+ + + Y VL D KR
Sbjct: 114 YEVIGIRREATPQEVKKGYHKVSLAVHPDQVSAAEKETATRKFQTLGKVYTVLSDKDKRA 293
Query: 76 IYDQYGE 82
YD+ GE
Sbjct: 294 XYDETGE 314
>18150
Length = 768
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 63 EAYDVLKDPKKREIYDQYGEDAIK 86
EA+++L D KR IYD YGE ++
Sbjct: 119 EAHEILSDKHKRTIYDTYGEKGLE 190
>38321
Length = 1059
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -1
Query: 325 DEGMPFQGRPFMKGNMYVRFNVDFPESVTS 354
+EGMP +KG++++ F++DFP+ S
Sbjct: 1047 NEGMPNYENNNVKGSLFITFDIDFPKGTLS 958
>20155
Length = 484
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 24 LLGVSKDADPDEIXXXXXXXXXXXXPDKGGDPDKFKEINEAYDVL 68
+LGVS A +I PD+GG P ++NEA D L
Sbjct: 151 ILGVSPSASKVKIKDAHKRIMLLNHPDRGGSPYLAAKVNEAKDYL 285
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|159488109|ref|XP_001702063.1| centriole proteome
protein [Chlamydomonas reinhardtii]
(183 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
19759 97 2e-23
12349 28 2.2
07280 27 4.0
08158 26 9.2
>19759
Length = 439
Score = 97.4 bits (241), Expect(2) = 2e-23, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 61/92 (66%)
Frame = +3
Query: 73 VKYTFPASFLKFKTVRTLLEFCVGPQPVSNLRMIERHFFKDKLVRTYDFEFGFCIPNSTN 132
V+Y F FLK KTV +EF VG + VS RM+E+H+F D+L++ +DFEFGFCIP+S N
Sbjct: 6 VRYQFTPQFLKLKTVGATVEFVVGDKEVSKFRMVEKHYFHDRLLKCFDFEFGFCIPHSRN 185
Query: 133 SWEAIYDVPEYPAGVINDYVTSPWAHKSDSFY 164
+ E IY+ PE + + + P+ +SDS Y
Sbjct: 186 TVEHIYEFPELTPDQMREMIDRPYETRSDSLY 281
Score = 28.5 bits (62), Expect(2) = 2e-23, Method: Compositional matrix adjust.
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 165 FVDNKLIMHNKAEYQY 180
V++KLIMHNKA+Y Y
Sbjct: 281 LVEDKLIMHNKADYAY 328
>12349
Length = 980
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 124 GFCIPNSTNSWEAIYDVPEYPA 145
G C+ N W+++Y PE+PA
Sbjct: 182 GACVARLHNCWDSLYRGPEFPA 117
>07280
Length = 1299
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 72 SVKYTFPASFLKFKTVRTLLEFCVGPQ 98
S + TFP SFL F VR ++ C P
Sbjct: 1179 SEEQTFPHSFLNFSVVREIISKCPPPH 1259
>08158
Length = 1019
Score = 26.2 bits (56), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 72 SVKYTFPASFLKFKTVRTLLEFC 94
S + TFP SFL F VR ++ C
Sbjct: 738 SEEQTFPHSFLNFSVVREIISKC 670
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158281842|gb|EDP07596.1| flagellar/basal body
protein, PACRG-like protein [Chlamydomonas reinhardtii]
(219 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11726 98 3e-21
04849 67 6e-12
>11726
Length = 458
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 64/88 (72%)
Frame = +1
Query: 129 TLQLLQKLVLSADLVGEALVPYYRQILPIFNLYKNKNKNLGDGIDYGQRNYDCLGELIAD 188
LQ+LQ +V VG+ALVP+YRQ+L + NLYKN N NLG+G+D + +G++I D
Sbjct: 4 ALQVLQLMVRLGPCVGQALVPFYRQLLAVCNLYKNVNVNLGEGVDPDRSKR--IGDVIED 177
Query: 189 TLALFEQKGGDDAFINIKYMVPTYESSV 216
TL L E GG +AFINIKYMVPTYESSV
Sbjct: 178 TLKLLEFCGGPNAFINIKYMVPTYESSV 261
>04849
Length = 1012
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 81/186 (43%), Gaps = 2/186 (1%)
Frame = +2
Query: 31 TAFRRFYERGDLPIAVDHRGSKNMIAWKVDIEKLDYHHYLPIFFDGIRETQEPYRFLAVK 90
TAF Y G +P + H K+ +AW E L + LP +G+RET PY ++
Sbjct: 305 TAFASLYSNGGVPCRLIHGSVKHKLAWDTPPEHLPFDPVLPTLAEGLRETVHPYTHVSHM 484
Query: 91 GVEDMLRVGGS--KXXXXXXXXXXXXKTALNTRDHSVMCITLQLLQKLVLSADLVGEALV 148
G +++L G+ K + AL HS + + L L+ + VG AL
Sbjct: 485 GFKELLESEGAGVKAAPLLNKVVPPLRAAL---IHSNNEVFERGLDGLIYLSTAVGPALN 655
Query: 149 PYYRQILPIFNLYKNKNKNLGDGIDYGQRNYDCLGELIADTLALFEQKGGDDAFINIKYM 208
P+ + NL +K + D + Y + + DTL + EQ GG + IK
Sbjct: 656 PHLK------NLLMALSKRMMD------KKYR---DKVTDTLQMLEQNGGKEVLPVIKAK 790
Query: 209 VPTYES 214
VPTY S
Sbjct: 791 VPTYSS 808
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= jgi|Chlre3|104097|e_gwH.26.129.1
(147 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
22063 63 2e-17
14945 64 3e-11
14594 61 2e-10
06641 54 3e-08
14366 44 2e-05
38338 40 4e-04
05237 38 0.002
08108 37 0.003
20251 35 0.008
01401 35 0.016
01491 33 0.065
32241 32 0.093
12214 31 0.21
01019 29 0.59
26849 28 1.0
16109 28 1.2
18677 27 2.5
04067 27 4.6
>22063
Length = 688
Score = 62.8 bits (151), Expect(2) = 2e-17, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 58/91 (63%)
Frame = +3
Query: 4 DLTKDESEAVLFAFETLDAERTGSVSRKQLKVALRALGFGVKKADVADLLARHGEESTQQ 63
+LT+++ + + AF+ DA+ +G++ K+LKVA+RALGF KK ++ ++A +E T
Sbjct: 150 ELTEEQKQEIREAFDLFDADGSGTIDAKELKVAMRALGFEPKKEEIKKMIAEIDKEGTGT 329
Query: 64 LDFQTFRRVVADMLCQRTPLDEHRRAFQLFD 94
+DF F ++ + ++ +E +AF+LFD
Sbjct: 330 IDFNDFLTIMTQKMSEKDAKEEILKAFRLFD 422
Score = 42.0 bits (97), Expect(2) = 2e-17, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Frame = +1
Query: 95 VLGQGAIDFVTLKRVAKSLNLDIPDEELQDMIHEFGK--DGLITEQDWLAIM 144
++ + I F LKRVAK L ++ DEELQ+MI E + DG I ++++L IM
Sbjct: 424 MMKRAKISFRNLKRVAKELGENLTDEELQEMIDEADRDGDGEINQEEFLRIM 579
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +3
Query: 85 EHRRAFQLFDVLGQGAIDFVTLKRVAKSLNLDIPDEELQDMIHEFGKD--GLITEQDWLA 142
E R AF LFD G G ID LK ++L + EE++ MI E K+ G I D+L
Sbjct: 174 EIREAFDLFDADGSGTIDAKELKVAMRALGFEPKKEEIKKMIAEIDKEGTGTIDFNDFLT 353
Query: 143 IMS 145
IM+
Sbjct: 354 IMT 362
>14945
Length = 1337
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 58/91 (63%)
Frame = +1
Query: 4 DLTKDESEAVLFAFETLDAERTGSVSRKQLKVALRALGFGVKKADVADLLARHGEESTQQ 63
+LT+++ + + AF+ DA+ +G++ K+LKVA+RALGF KK ++ ++A +E T
Sbjct: 91 ELTEEQKQEIREAFDLFDADGSGTIDAKELKVAMRALGFEPKKEEIKKMIAEIDKEGTGT 270
Query: 64 LDFQTFRRVVADMLCQRTPLDEHRRAFQLFD 94
+DF F ++ + ++ +E +AF+LFD
Sbjct: 271 IDFNDFLTIMTQKMSEKDAKEEILKAFRLFD 363
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 85 EHRRAFQLFDVLGQGAIDFVTLKRVAKSLNLDIPDEELQDMIHEFGKD--GLITEQDWLA 142
E R AF LFD G G ID LK ++L + EE++ MI E K+ G I D+L
Sbjct: 115 EIREAFDLFDADGSGTIDAKELKVAMRALGFEPKKEEIKKMIAEIDKEGTGTIDFNDFLT 294
Query: 143 IMS 145
IM+
Sbjct: 295 IMT 303
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Frame = +2
Query: 78 CQRTPLDEHRRAFQL---FDVLGQGAIDFVTLKRVAKSLNLDIPDEELQDMIHEFGK--D 132
++TP RR+ +L ++ I F LKRVAK L ++ DEELQ+MI E + D
Sbjct: 314 ARKTP---RRRS*KLSVCLTMMKPAKISFRNLKRVAKELGENLTDEELQEMIDEADRDGD 484
Query: 133 GLITEQDWLAIM 144
G I ++++L IM
Sbjct: 485 GEINQEEFLRIM 520
>14594
Length = 1014
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Frame = +3
Query: 16 AFETLDAERTGSVSRKQLKVALRALGFGVKKADVADLLARHGEESTQQLDFQTFRRVVAD 75
AF D + G+++ +L +R+LG + ++ D++ + +DF+ F ++A
Sbjct: 456 AFSLFDKDGDGTITTSELGTVMRSLGQNPTENELQDMINEVDADGNGTIDFEEFLHMMAR 635
Query: 76 MLCQRTPLDEHRRAFQLFDVLGQGAIDFVTLKRVAKSLNLDIPDEELQDMIHE--FGKDG 133
+ +E R AF++FD G G I L+ V +L + DEE+ +MI E DG
Sbjct: 636 KMKDTDCEEELREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIKEADLDGDG 815
Query: 134 LITEQDWLAIMSA 146
++ ++++ +M+A
Sbjct: 816 MVNYEEFVTMMTA 854
>06641
Length = 726
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 7/150 (4%)
Frame = +1
Query: 5 LTKDESEAVLFAFETLDAERTGSVSRKQLKVALRALGFGVKKADVADLLAR-HGEESTQQ 63
+ D + + AF+ D E +V +++ +R+LG +A++ D+LA EE T
Sbjct: 175 MIADTQKKITDAFDIFDHEANKTVDVREVGTIIRSLGCCPSEAELHDMLAEIEEEEPTGY 354
Query: 64 LDFQTFRRVVADMLCQR----TPLDEHRRAFQLFDVLGQGAIDFVTLKRVAKSLNLDIPD 119
+ F+ F ++ +L +R P D+ +AFQ+ DV G+G + L +
Sbjct: 355 IRFEKFLPMMTKVLMERRYKAVPEDQIVKAFQVLDVEGRGYLLQEELSKYMTEEGEPFTS 534
Query: 120 EELQDMIHEF--GKDGLITEQDWLAIMSAD 147
EEL++M+ + + G I +D+ ++M+A+
Sbjct: 535 EELEEMMSQALDPEKGYIPYKDYASLMAAE 624
>14366
Length = 499
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Frame = -3
Query: 20 LDAERTGSVSRKQLKVALRALGFGVKKADVADLLARHGEESTQQLDFQTFRRVVADMLCQ 79
++ +++ +L + +R++G ++ + L + L Q +V
Sbjct: 443 MNCSPDNTIALNKLGIVVRSIGRAPTESQLKTLTMEFENRGKRTLTLQEVIAIVTKYEFA 264
Query: 80 RTPLDEHRRAFQLFDVLGQGAIDFVTLKRVAKSLNLDIPDEELQDMIHE--FGKDGLITE 137
D R AF++FD G G I+ L+ V L + DEE+ +MI E DG ++
Sbjct: 263 PETSDNLREAFRIFDKEGNGMINAAELRHVLTHLGEKLSDEEVDEMIREADISGDGQVSY 84
Query: 138 QDWLAIM 144
D++ +M
Sbjct: 83 NDFVKVM 63
>38338
Length = 463
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = -2
Query: 70 RRVVADMLCQRTPLDEHRRAFQLFDVLGQGAIDFVTLKRVAKSLNLDIPDEELQDMIHEF 129
+ +AD L + + E + AF LFD G G I L V +SL + + ELQDMI+E
Sbjct: 207 KSNMADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV 31
Query: 130 GKDG 133
DG
Sbjct: 30 DADG 19
>05237
Length = 472
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 84 DEHRRAFQLFDVLGQGAIDFVTLKRVAKSLNLDIPDEELQDMIHE--FGKDGLITEQDWL 141
DE R AF++FD G G I L+ V +L + DEE+ +MI E DG + ++++
Sbjct: 27 DELREAFRVFDKDGNGFISASELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 206
Query: 142 AIMSA 146
+M+
Sbjct: 207 KMMTT 221
>08108
Length = 818
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +2
Query: 16 AFETLDAERTGSVSRKQLKVALRALGFGVKKADVADLLARHGEESTQQLDFQTFRRVV 73
AF D + +GS+S +L ALRA G + A+L+ ++ +S +D FR++V
Sbjct: 140 AFAVFDTDGSGSISAGELGEALRAQGADITDDQTAELIKKYDSDSNGDIDTDEFRKLV 313
>20251
Length = 2203
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 50/113 (44%)
Frame = +3
Query: 16 AFETLDAERTGSVSRKQLKVALRALGFGVKKADVADLLARHGEESTQQLDFQTFRRVVAD 75
AF +D R G + ++ L L +LG + + +++ + ++F F + D
Sbjct: 174 AFNMIDQNRDGFIDKEDLGDMLASLGKNPTEGQLDEMM----NXAPGPINFTMFLTMFGD 341
Query: 76 MLCQRTPLDEHRRAFQLFDVLGQGAIDFVTLKRVAKSLNLDIPDEELQDMIHE 128
L P D + AF FD G+G I L+ + ++ D+E+ +M +
Sbjct: 342 KLNGTDPEDVIKNAFACFDEDGKGVIQEDRLRELLTTMGDRFTDDEVDEMFRD 500
>01401
Length = 1454
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +1
Query: 17 FETLDAERTGSVSRKQLKVALRALG-FGVKKADVADLLARHGEESTQQLDFQTFRRV 72
F LD + +GS++R+++ A+++ G ++ A ++DLL +++ Q+LD+ F +V
Sbjct: 280 FRQLDKDNSGSLTREEIMAAVQSEGELKLRAAKISDLLVAWHKDADQKLDYNEFVQV 450
>01491
Length = 1707
Score = 32.7 bits (73), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 89 AFQLFDVLGQGAIDFVTLKRVAKSLNLDIPDEELQD 124
F LFD G G + L V KSL L + DE+L++
Sbjct: 143 TFHLFDKKGNGTVSTKELANVFKSLGLQVEDEKLKN 250
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%)
Frame = +1
Query: 41 GFGVKKADVADLLARHGEESTQQLDFQTFRRVVADMLCQRTPLDEHRRAFQLFDVLGQGA 100
G G K + AD + E++ + ++ F+ V L + E R AF++ D +G
Sbjct: 226 GGGRKTEEWADAVD---EDAAGFITWEQFKPVFELKLHEDEDEREMREAFRVLDKGNKGV 396
Query: 101 IDFVTLKRVAKSLNLDIPDEELQDMIHEFGKDG 133
I L+ + KSL D+ ++E++DMI E DG
Sbjct: 397 IPVEDLRWLLKSLGDDLTEDEIEDMIVETDTDG 495
>32241
Length = 328
Score = 32.0 bits (71), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 16 AFETLDAERTGSVSRKQLKVALRALGFGVKKADVADLLARHGEESTQQLDFQTF 69
FE +D R+GS+ +L A R +GF V V +L + + + L F
Sbjct: 237 TFERIDTNRSGSIEANELVTAYRQMGFNVSPQFVQTVLYKFDHLARRSLSLDMF 76
>12214
Length = 654
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 16 AFETLDAERTGSVSRKQLKVALRALGFGVKKADVADLLAR 55
FE D+ R+GS+ +L+ A + +GF V V +L +
Sbjct: 550 TFERYDSNRSGSIEGNELQAAYQQMGFNVSPRFVQTVLYK 431
>01019
Length = 1705
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 92 LFDVLGQGAIDFVTLKRVAKSLNLDIPDEELQDMIHE--FGKDGLITEQDWLAIMSA 146
+FD G G I L+ V +L + DEE+ +MI E DG + ++++ +M++
Sbjct: 43 VFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 213
>26849
Length = 649
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 88 RAFQLFDVLGQGAIDFVTLKRVAKSLNLDIPDEELQDMIHEFGKDG 133
RAF++ D G + K+ +++DI + +++DM + F DG
Sbjct: 179 RAFRVMDKDGSKVLSLEEFKKGILDMHIDINEADIEDMFYRFDNDG 316
>16109
Length = 1490
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +3
Query: 16 AFETLDAERTGSVSRKQLKVALRALGFGVKKADVADLLARHGEE--STQQLDF-QTFRRV 72
AF T D + V +LK + +GF + + ++ R+G+E + DF Q+F RV
Sbjct: 1047 AFHTTDVSKDKLVDTFELKDLFKKIGFTIDSEVLKRIVCRYGDEDGKIHEDDFLQSFCRV 1226
Query: 73 VA 74
+A
Sbjct: 1227 LA 1232
>18677
Length = 754
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +2
Query: 16 AFETLDAERTGSVSRKQLKVALRALGFGVKKADVADLLARHGEESTQ 62
F D R+G V +L LGF V + + ++ R+G+ Q
Sbjct: 521 VFLQFDKNRSGLVDTYELGNMFSKLGFPVTRPVLTSIVRRYGDRRNQ 661
>04067
Length = 1920
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -1
Query: 98 QGAIDFVTLKRVAKSLNLDIPDEELQDMIHEFGKDG 133
+G I L+ + KSL D+ ++E++DMI E DG
Sbjct: 1902 KGVIPVEDLRWLLKSLGDDLTEDEIEDMILETDTDG 1795
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158277722|gb|EDP03489.1| nephrocystin-4-like protein
[Chlamydomonas reinhardtii]
(1772 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07008 86 9e-17
22689 32 2.2
>07008
Length = 1270
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 129/278 (46%), Gaps = 21/278 (7%)
Frame = -2
Query: 873 GTAPSRVLLQQLHDAGMIDALPADVQAILRRKGPP---RGPS-PVPIDLAIEARDPRVAS 928
G + SR +L+ AG +L R G P PS P+ ++LA E D A+
Sbjct: 759 GQSLSRAAYARLYSAGF--------PPVLDRNGDPPEVMDPSLPMSVNLARENADSLQAN 604
Query: 929 DVVLQFLAF-RHHDHLNAPANLKSLYLTFQFYHFPPTTSDMAYL-------------VPV 974
+++ QFLAF + ++ A+ ++ TFQFY +P T++ L +P
Sbjct: 603 EIIFQFLAFSKLLPGRSSQASPGCVFFTFQFYRYPQVTTERMLLCKPDGQLSNNQDNLPF 424
Query: 975 RLEDDAVDSTCVLVPADPARKGA-GLVLKYVVDGAAEAVPSGQTPQDAGFEAARGFAQYL 1033
L+ + D T + KGA G+ ++Y++D P+ P + F Q+L
Sbjct: 423 ILQKLSRDGTVL--------KGAPGIEVRYLLD------PTYMKPGEVAL-----FLQHL 301
Query: 1034 AVKTLHLDVWDGDSLLQVGTASVDLQPLLRQGRDFAELLVEVPI--LDQAAVAPSLQGQT 1091
A +TLH+DVWDGDSLL +G+ SVD++ L R G++ + E+ + DQ+ L G
Sbjct: 300 ARQTLHVDVWDGDSLLLIGSCSVDMKYLCRGGQEAVQATFELDVSSTDQSDDGSGLTGDI 121
Query: 1092 FMEAAYNQNTAQNEPKASIISKGSLVLRALNLGRESRN 1129
+ + Q+ S G L LR N+G N
Sbjct: 120 QRGGSVRPVSTQHR------SCGKLHLRIANVGHTVEN 25
>22689
Length = 1410
Score = 32.0 bits (71), Expect = 2.2, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 61 DRAALTIQRHYRGYRTRKNLPPEAQVFQRARGTQQ 95
D+AA TIQ +Y+GYR R E Q + +Q
Sbjct: 938 DKAATTIQSYYKGYRVRTEHKSERQTLAERKEQRQ 1042
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158273922|gb|EDO99707.1| tektin, flagellar protein
associated with inner arm dynein [Chlamydomonas reinhardtii]
(482 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03948 72 7e-13
16615 53 3e-07
14949 32 0.69
00106 30 2.9
18689 28 6.9
>03948
Length = 2007
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 161/396 (40%), Gaps = 13/396 (3%)
Frame = +1
Query: 32 APYEWTLESVEQMGLGATENRMSSTLRDASSQLQAVASATVANDISIVDRALTTKLSQTE 91
+P +W L + L E + LR + + A N + V + L ++
Sbjct: 34 SPNDWNLSNSMNYSLSDKERSFAERLRADAWRAVKETDARTRNRQNDVTKRLGERVYDIX 213
Query: 92 SLKNMLETCLAEVISEIAELLSTKKRLEERNGKVQAKIGVNSNRMQVRSSRPPREMTMDE 151
K L + + + +EI L K+ E+ + + + R R ++ D+
Sbjct: 214 FWKTELNSEVNAMATEIENLKEYKRTCEKALADTANPLHIAEECLMNREKRQGIDLVNDD 393
Query: 152 VEKGLIKQQGMLGSFSDRVARAVAQVDREVAQLEAVRAK---LEADLRDKTEALRVDE-- 206
VEK L+K+ ++ R+ + + D+ QL+ RA LE D +DK A +D+
Sbjct: 394 VEKSLVKEVDIIKRCQARMKKVL---DKAYVQLKMNRAAQHALEIDAKDKHHAQGLDDRM 564
Query: 207 --------AVLSIPTDPTVEGTLSPTFRRGAADCPPKTPHTWVRNTEDNLRNAHHWLADS 258
V IP +++ TL+ P +W R T++N+ + A S
Sbjct: 565 QQMRNSSAGVGYIPGIESIDNTLT-------------IPESWARYTQENIARSQKERASS 705
Query: 259 ARLRKAIAHAVANSRATEHDVANRLNENMLAKVAATRNLREDLQAQLEKVREEQARAKGQ 318
RLR I + + + N +N + +V T + R LQA L++ +E +
Sbjct: 706 ERLRGEIDSTLRHCANEMWNNFNAVNNSFNTRVRETTDARNKLQAHLQRTMQEIFDMERN 885
Query: 319 RSALTSALDDKRGPLAQARERLAVRKARPCRENVNDXXXXXXXXXXXXXXXXTQQLSVKV 378
+ L A+ DK P+ A+ RL R R E ND + L ++
Sbjct: 886 INLLRKAIQDKENPMKVAQTRLDERTRRINVELCNDPVMKSLQREVAEIRESVRLLKERL 1065
Query: 379 AAVDREIAALDATAAQLESNIADKDDALRVDERVVL 414
+ + +A L T + LE +I+ K+++LR+D +
Sbjct: 1066KSSELSLARLMKTKSTLEHDISVKENSLRIDNSFCM 1173
>16615
Length = 1307
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 132/335 (39%), Gaps = 13/335 (3%)
Frame = -3
Query: 33 PYEWTLESVEQMGLGATENRMSSTLRDASSQLQAVASATVANDISIVDRALTTKLSQTES 92
P +W+L + L E + LR + + A N + V + L ++
Sbjct: 1056 PNDWSLSNSMNYSLSDKERSFAERLRADAWRAVKETDARTRNRQNDVTKRLGERVYDISF 877
Query: 93 LKNMLETCLAEVISEIAELLSTKKRLEERNGKVQAKIGVNSNRMQVRSSRPPREMTMDEV 152
K L + + + +EI L K+ E+ + + + R R ++ D+V
Sbjct: 876 WKTELNSEVNAMATEIENLKEYKRTCEKALADTANPLHIAEECLMHREKRQGIDLVNDDV 697
Query: 153 EKGLIKQQGMLGSFSDRVARAVAQVDREVAQLEAVRAK---LEADLRDKTEALRVDE--- 206
EK L+K+ ++ ++ + + D+ QL+ RA LE D +DK A +D+
Sbjct: 696 EKSLVKEVDVIKKCQAKMKKVL---DKAYVQLKMNRAAQHALEIDAKDKHHAQGLDDRMQ 526
Query: 207 -------AVLSIPTDPTVEGTLSPTFRRGAADCPPKTPHTWVRNTEDNLRNAHHWLADSA 259
V IP ++ TL+ P +W R T++N+ + A S
Sbjct: 525 QLRNSSAGVGYIPGIENIDNTLT-------------IPESWARYTQENIARSQKERAASE 385
Query: 260 RLRKAIAHAVANSRATEHDVANRLNENMLAKVAATRNLREDLQAQLEKVREEQARAKGQR 319
RLR I + + N +N ++ + + R LQA L+K +E +
Sbjct: 384 RLRGEIDSTLRQCANEMWNNFNAVNNAFNTRIRESNDARNKLQAHLQKTMQEIFDMERNI 205
Query: 320 SALTSALDDKRGPLAQARERLAVRKARPCRENVND 354
L A+ DK P+ A+ RL R R E ND
Sbjct: 204 DLLRKAIQDKENPMKVAQTRLDERTRRINVELCND 100
>14949
Length = 465
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 4/130 (3%)
Frame = -3
Query: 186 AVRAKLEADLRDKTEALRVDEAVLSIPTDPTVEGTLSPTFRRGAADCPPKTPHTWVRNTE 245
A + +LE D DK A +D + I + +R D P TW R +
Sbjct: 418 AAQHELEKDSIDKQIAESMDTSCHGIRNSSHGIAFYNGVYR---TDNTVSVPETWARFSN 248
Query: 246 DNLRNAHHWLADSARLRKAIA---HAVANSRATEHDVAN-RLNENMLAKVAATRNLREDL 301
DN++ + A S ++R I +A +N + + AN LN+ ++ T + R L
Sbjct: 247 DNVQRSQSERAASKQMRNEIETVLNACSNEMWNQWNAANVALNQ----RIQETTDTRNRL 80
Query: 302 QAQLEKVREE 311
Q L KV +E
Sbjct: 79 QTHLSKVLQE 50
>00106
Length = 473
Score = 29.6 bits (65), Expect = 2.9, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +2
Query: 420 NLAQRPPSSVASFAMSDMSAPRTQTLARIRELEASLTSARREREAMESSIRQLRDTMG 477
N Q PP S S+ + S + + ++ E + L RER I ++DT+G
Sbjct: 74 NHTQIPPRSSFSYLAKEQSPV*DEIVGKVYERHSLLLLTHRERHPGSFDIVHIKDTLG 247
>18689
Length = 723
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +2
Query: 72 VANDISIVDRALTTKLSQTESLKNMLETCLAEVISEIAELLSTKKRLEERNGKVQAKIGV 131
A ++S + R LT + L M E C+ +++AE K+ EE+N + + G
Sbjct: 74 FALNVSAIFRCLTKYRNFLPCLHTMCEDCITGR-TDVAE---NKEMKEEKNENRRRRAGK 241
Query: 132 NSNRMQVRSSRPPR 145
S ++Q++ PPR
Sbjct: 242 KSPKIQLKRKNPPR 283
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158273302|gb|EDO99093.1| centriole proteome protein
[Chlamydomonas reinhardtii]
(2083 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
19949 54 4e-07
00561 50 1e-05
03156 48 5e-05
01327 48 5e-05
02090 47 1e-04
19498 44 6e-04
17598 44 0.001
12806 44 0.001
27465 40 0.007
27270 40 0.007
30256 39 0.015
11493 39 0.016
03395 39 0.019
21921 39 0.026
13278 39 0.028
15337 39 0.030
02948 39 0.032
15780 37 0.059
17266 37 0.10
21105 36 0.14
17602 36 0.17
13335 36 0.21
01462 35 0.24
18981 35 0.41
19863 34 0.58
02960 34 0.58
17298 34 0.60
10162 34 0.66
07542 33 0.84
01249 33 0.84
02147 33 1.1
01598 33 1.2
14105 33 1.5
19140 33 1.6
15972 31 4.2
12574 31 4.3
14555 31 5.1
27806 31 5.5
>19949
Length = 903
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 56/117 (47%)
Frame = +2
Query: 769 RSHCGAVNAVAVDPNRDQYCTVSSDGTLRIWHLATHQQLYEFDAPGEAVSAIAYHPHPSH 828
+ H G V + P+ + S DG +++W L + L + +AV+ I +HPH
Sbjct: 110 KGHTGCVCCLRFSPDGRWIASASEDGLVKLWDLTAGKLLTDLKLHRDAVNTIEFHPH--E 283
Query: 829 HELAAGFANGRLRVFDVPSTTLLQEHHQHRAGITELLFSPGGDRLFSGGADGALVVY 885
LA+G A+ ++ +D+ + L+ I +LF P G L+SG D L VY
Sbjct: 284 FLLASGSADRTVKFWDLETFQLISTTEPEANSIRSILFHPDGVCLYSGSKD-TLKVY 451
Score = 46.2 bits (108), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 45/96 (46%)
Frame = +2
Query: 729 HEGAVTGLAMSTDALRLAVGTENGTLGVLAIPTHAYTTLLRSHCGAVNAVAVDPNRDQYC 788
H G V L S D +A +E+G + + + T L+ H AVN + P+
Sbjct: 116 HTGCVCCLRFSPDGRWIASASEDGLVKLWDLTAGKLLTDLKLHRDAVNTIEFHPHEFLLA 295
Query: 789 TVSSDGTLRIWHLATHQQLYEFDAPGEAVSAIAYHP 824
+ S+D T++ W L T Q + + ++ +I +HP
Sbjct: 296 SGSADRTVKFWDLETFQLISTTEPEANSIRSILFHP 403
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 6/149 (4%)
Frame = +2
Query: 476 RQRYCL----GHTAFVCALAVASDGRLLASCQEGKEAIVRLWDTANCACLAILNAHASGL 531
R++ C+ GHT VC L + DGR +AS E + +V+LWD L L H +
Sbjct: 83 RRKGCIYTYKGHTGCVCCLRFSPDGRWIASASE--DGLVKLWDLTAGKLLTDLKLHRDAV 256
Query: 532 SCVDLSPDLRALAAVGLDVQGRQTIALWNIAELRAAGGPKVELVTRHATEYNIKVLKFSA 591
+ ++ P LA+ D +T+ W++ +L++ TE ++
Sbjct: 257 NTIEFHPHEFLLASGSAD----RTVKFWDLETF--------QLIS--TTEPEANSIRSIL 394
Query: 592 YQEDH--LLTAGRDSIRIYRLKAGQLRGT 618
+ D L + +D++++Y + +L T
Sbjct: 395 FHPDGVCLYSGSKDTLKVYHWEPLELYDT 481
Score = 36.6 bits (83), Expect = 0.12, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 1386 DVVVWEAASGRELWRLRYHPLGVQALAFSPDGRWLVSLGRDPERGVV-VWDVAAGLLV 1442
+V +W+ ++ + H V L FSPDGRW+ S D G+V +WD+ AG L+
Sbjct: 62 NVKLWDIRRKGCIYTYKGHTGCVCCLRFSPDGRWIASASED---GLVKLWDLTAGKLL 226
Score = 33.5 bits (75), Expect = 0.97, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +2
Query: 998 LCLDPAGRYAATAGADGLLRLWGCVPLPALRGLKGLPPNSAFLGHPSAILGAAFHRSGYL 1057
L P GR+ A+A DGL++LW L LK H A+ FH +L
Sbjct: 137 LRFSPDGRWIASASEDGLVKLWDLTAGKLLTDLK---------LHRDAVNTIEFHPHEFL 289
Query: 1058 VTVGDAD 1064
+ G AD
Sbjct: 290 LASGSAD 310
Score = 32.3 bits (72), Expect = 2.3, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 510 VRLWDTANCACLAILNAHASGLSCVDLSPDLRALAAVGLDVQGRQTIALWNI 561
V+LWD C+ H + C+ SPD R +A+ D + LW++
Sbjct: 65 VKLWDIRRKGCIYTYKGHTGCVCCLRFSPDGRWIASASED----GLVKLWDL 208
>00561
Length = 1003
Score = 50.1 bits (118), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 73/159 (45%), Gaps = 1/159 (0%)
Frame = -3
Query: 729 HEGAVTGLAMSTDALRLAVGTENGTLGVLAIPTHAYTTLLRSHCGAVNAVAVDPNRDQYC 788
H ++ + +S+D G+ + TL + + T H V +VA + Q
Sbjct: 869 HSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIV 690
Query: 789 TVSSDGTLRIWH-LATHQQLYEFDAPGEAVSAIAYHPHPSHHELAAGFANGRLRVFDVPS 847
+ S D T+++W+ LA + + D + VS + + P+ S+ + + + ++V+++ +
Sbjct: 689 SGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLAN 510
Query: 848 TTLLQEHHQHRAGITELLFSPGGDRLFSGGADGALVVYD 886
L HH H + + SP G SGG D +++D
Sbjct: 509 CKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWD 393
Score = 34.3 bits (77), Expect = 0.53, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 36/84 (42%)
Frame = -3
Query: 477 QRYCLGHTAFVCALAVASDGRLLASCQEGKEAIVRLWDTANCACLAILNAHASGLSCVDL 536
Q+ GH+ F+ + ++SDG S + +RLWD A H + V
Sbjct: 887 QKRLYGHSHFISDVVLSSDGNYALS--GSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAF 714
Query: 537 SPDLRALAAVGLDVQGRQTIALWN 560
S D R + + D +TI LWN
Sbjct: 713 SADNRQIVSGSRD----KTIKLWN 654
Score = 33.1 bits (74), Expect = 1.2, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = -3
Query: 1389 VWEAASGRELWRLRYHPLGVQALAFSPDGRWLVSLGRDPERGVVVWDVAA 1438
+W+ A+G+ R H V ++AFS D R +VS RD + + +W+ A
Sbjct: 788 LWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRD--KTIKLWNTLA 645
>03156
Length = 1014
Score = 47.8 bits (112), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Frame = +1
Query: 789 TVSSDGTLRIWHLATHQQLYEFDAPGEAVSAIAYHPHPSHHELAAGFANGRLRVFDVPST 848
+ S D T+++W + +F V+AI H + + L +G + +R++DV +
Sbjct: 106 SASRDKTIKMWQRGNSHSIRDFIGHDMVVTAI--HLNTDNTLLCSGSRDNTVRIWDVETG 279
Query: 849 TLLQEHHQHRAGITELLFSPGGDRLFSGGADGALVVYDT-----ARMYAPAQYLSAGVRD 903
L++++ + +T++ + PG + G D + +YD+ R + QY
Sbjct: 280 ACLRQNNIPQNLVTDVKWLPGSHLIIQAGEDKEVRIYDSRTLGIVRSFTKKQY------- 438
Query: 904 IKVCCAVSSNGAF 916
I++ C V+++G F
Sbjct: 439 IQMSCDVTADGQF 477
Score = 32.7 bits (73), Expect = 1.7, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 478 RYCLGHTAFVCALAVASDGRLLASCQEGKEAIVRLWDTANCACL 521
R +GH V A+ + +D LL C ++ VR+WD ACL
Sbjct: 163 RDFIGHDMVVTAIHLNTDNTLL--CSGSRDNTVRIWDVETGACL 288
>01327
Length = 2215
Score = 47.8 bits (112), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Frame = +3
Query: 789 TVSSDGTLRIWHLATHQQLYEFDAPGEAVSAIAYHPHPSHHELAAGFANGRLRVFDVPST 848
+ S D T+++W + +F V+AI H + + L +G + +R++DV +
Sbjct: 216 SASRDKTIKMWQRGNSHSIRDFIGHDMVVTAI--HLNTDNTLLCSGSRDNTVRIWDVETG 389
Query: 849 TLLQEHHQHRAGITELLFSPGGDRLFSGGADGALVVYDT-----ARMYAPAQYLSAGVRD 903
L++++ + +T++ + PG + G D + +YD+ R + QY
Sbjct: 390 ACLRQNNIPQNLVTDVKWLPGSHLIIQAGEDKEVRIYDSRTLGIVRSFTKKQY------- 548
Query: 904 IKVCCAVSSNGAF 916
I++ C V+++G F
Sbjct: 549 IQMSCDVTADGQF 587
Score = 32.7 bits (73), Expect = 1.7, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 478 RYCLGHTAFVCALAVASDGRLLASCQEGKEAIVRLWDTANCACL 521
R +GH V A+ + +D LL C ++ VR+WD ACL
Sbjct: 273 RDFIGHDMVVTAIHLNTDNTLL--CSGSRDNTVRIWDVETGACL 398
>02090
Length = 1841
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = -3
Query: 473 TPGRQRYCLGHTAFVC-ALAVASDGRL-LASCQEGKEAIVRLWDTANCACLAILNAHASG 530
TP R + L +A C ALA++ DG++ + C +G A+ WD N + H G
Sbjct: 1659 TP-RIKAELTSSAPACYALAISPDGKVCFSCCSDGNIAV---WDLHNQTLVRQFQGHTDG 1492
Query: 531 LSCVDLSPDLRALAAVGLDVQGRQTIALWNIAELR 565
SC+D+SPD L GLD T+ W++ E R
Sbjct: 1491 ASCIDISPDGTKLWTGGLD----NTVRSWDLREGR 1399
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%)
Frame = -3
Query: 795 TLRIWHLATHQQLYEFDAPGEAVSAIAYHPHPSHHELAAGFANGRLRVFDVPSTTLLQEH 854
TL IW LAT + + A + A P + ++G + V+D+ + TL+++
Sbjct: 1689 TLSIWDLATPTPRIKAELTSSAPACYALAISPDGKVCFSCCSDGNIAVWDLHNQTLVRQF 1510
Query: 855 HQHRAGITELLFSPGGDRLFSGGADGALVVYD 886
H G + + SP G +L++GG D + +D
Sbjct: 1509 QGHTDGASCIDISPDGTKLWTGGLDNTVRSWD 1414
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 2/129 (1%)
Frame = -3
Query: 750 ENGTLGV--LAIPTHAYTTLLRSHCGAVNAVAVDPNRDQYCTVSSDGTLRIWHLATHQQL 807
E TL + LA PT L S A A+A+ P+ + SDG + +W L +
Sbjct: 1698 EASTLSIWDLATPTPRIKAELTSSAPACYALAISPDGKVCFSCCSDGNIAVWDLHNQTLV 1519
Query: 808 YEFDAPGEAVSAIAYHPHPSHHELAAGFANGRLRVFDVPSTTLLQEHHQHRAGITELLFS 867
+F + S I P + +L G + +R +D+ LQ+ H + I L +
Sbjct: 1518 RQFQGHTDGASCIDISPDGT--KLWTGGLDNTVRSWDLREGRQLQQ-HDFSSQIFSLGYC 1348
Query: 868 PGGDRLFSG 876
P G+ L G
Sbjct: 1347 PTGEWLAVG 1321
Score = 33.5 bits (75), Expect = 1.00, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = -3
Query: 669 ASGALFVVDYTTRQLDAIFQLHAAAINCLVVS-DGLVL-TGGDDRLLRAWPLDFRDYLLE 726
+ G + V D + L FQ H +C+ +S DG L TGG D +R+W L L +
Sbjct: 1566 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISPDGTKLWTGGLDNTVRSWDLREGRQLQQ 1387
Query: 727 AEHEGAVTGLAMSTDALRLAVGTENGTLGVL 757
+ + L LAVG E+ + VL
Sbjct: 1386 HDFSSQIFSLGYCPTGEWLAVGMESSNVEVL 1294
>19498
Length = 903
Score = 44.3 bits (103), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 21/139 (15%)
Frame = -1
Query: 682 QLDAIFQLHAAAINCLVVSDG--LVLTGGDDRLLRAWPLD------------------FR 721
Q+D+ H +NC+ S+ + +GGDD+L+ W + +R
Sbjct: 801 QMDS----HLGCVNCVRWSENGKFLASGGDDKLIMIWQISRGFGSGKSFGSNVTILEHWR 634
Query: 722 DYLLEAEHEGAVTGLAMSTDALRLAVGTENGTLGVL-AIPTHAYTTLLRSHCGAVNAVAV 780
H G V LA S L LA + + T+ V A+ ++R H G V V
Sbjct: 633 SVATLRGHAGDVLDLAWSPQDLWLASCSVDNTIVVWNALKFSEQVAVIRGHAGMVKGVTW 454
Query: 781 DPNRDQYCTVSSDGTLRIW 799
DP + S D TLR+W
Sbjct: 453 DPVGRYLASQSDDKTLRVW 397
>17598
Length = 875
Score = 43.5 bits (101), Expect = 0.001, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 80/196 (40%), Gaps = 12/196 (6%)
Frame = +1
Query: 703 LVLTGGDDRLLRAWPLDFRDYLLEAE-----------HEGAVTGLAMSTDALRLAVGTEN 751
++ GG D+LL W L R E E H V+ +++S D+ + + +
Sbjct: 7 FLIXGGRDKLLIVWDLVPRKDGDEDETWGGPRRTLQGHSHFVSDVSLSADSRYVLSSSWD 186
Query: 752 GTLGVLAIPTHAYTTLLRSHCGAVNAVAVDPNRDQYCTVSSDGTLRIWHLATHQQL-YEF 810
TL + I T SH AVA P+ Q + D L+IW+ + +
Sbjct: 187 ATLRLWDIKKGNTTRRFISHTRDALAVAFSPDNRQIASGGRDKALKIWNTVGECKFTVDA 366
Query: 811 DAPGEAVSAIAYHPHPSHHELAAGFANGRLRVFDVPSTTLLQEHHQHRAGITELLFSPGG 870
++ + V+ + +H + + + ++V+D + TL H+ I + +
Sbjct: 367 NSHQDWVTCVKFHQDAKSPLVVSASMDKTIKVWDNQTMTLKHTFVGHKTQINAIDLALKT 546
Query: 871 DRLFSGGADGALVVYD 886
L SG DG ++ ++
Sbjct: 547 YYLASGSKDGIVMTWN 594
Score = 34.3 bits (77), Expect = 0.60, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 1385 ADVVVWEAASGRELWRLRYHPLGVQALAFSPDGRWLVSLGRDPERGVVVWD 1435
A + +W+ G R H A+AFSPD R + S GRD + + +W+
Sbjct: 187 ATLRLWDIKKGNTTRRFISHTRDALAVAFSPDNRQIASGGRD--KALKIWN 333
>12806
Length = 961
Score = 43.5 bits (101), Expect = 0.001, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 40/80 (50%)
Frame = +3
Query: 482 GHTAFVCALAVASDGRLLASCQEGKEAIVRLWDTANCACLAILNAHASGLSCVDLSPDLR 541
GH+ F+ LA+++D R S +A +RLWD + + H + V SPD R
Sbjct: 159 GHSHFISDLALSADSRFALS--SSWDATLRLWDIKKGSTTSRFINHTRDVLTVAFSPDNR 332
Query: 542 ALAAVGLDVQGRQTIALWNI 561
+A+ G D + + +WNI
Sbjct: 333 QIASGGRD----KNLKIWNI 380
Score = 34.7 bits (78), Expect = 0.44, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +3
Query: 1385 ADVVVWEAASGRELWRLRYHPLGVQALAFSPDGRWLVSLGRDPERGVVVWDV 1436
A + +W+ G R H V +AFSPD R + S GRD + + +W++
Sbjct: 231 ATLRLWDIKKGSTTSRFINHTRDVLTVAFSPDNRQIASGGRD--KNLKIWNI 380
>27465
Length = 658
Score = 40.4 bits (93), Expect = 0.007, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 55/123 (44%)
Frame = -1
Query: 767 LLRSHCGAVNAVAVDPNRDQYCTVSSDGTLRIWHLATHQQLYEFDAPGEAVSAIAYHPHP 826
+LR+H + VA + + + T S D T +IW A+ ++L+ + V AIA++ +P
Sbjct: 376 VLRAHILPLTNVAFNKSGSSFITGSYDRTCKIWDTASAEELHTLEGHRNVVYAIAFN-NP 200
Query: 827 SHHELAAGFANGRLRVFDVPSTTLLQEHHQHRAGITELLFSPGGDRLFSGGADGALVVYD 886
++ G + +++ H A I + F+P + +G D ++D
Sbjct: 199 FGDKVITGSFDKTCKLWSTADGKCYHTLRGHTAEIVCVSFNPSSTLIATGSMDTTCRLWD 20
Query: 887 TAR 889
+
Sbjct: 19 VEK 11
Score = 33.9 bits (76), Expect = 0.76, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -1
Query: 511 RLWDTANCACLAILNAHASGLSCVDLSPDLRALAAVGLDVQGRQTIALWNI 561
+LW TA+ C L H + + CV +P +A +D R LW++
Sbjct: 157 KLWSTADGKCYHTLRGHTAEIVCVSFNPSSTLIATGSMDTTCR----LWDV 17
>27270
Length = 1078
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Frame = +2
Query: 741 DALRLAVGTENGTLGVLAIPTHAYTTLL-RSHCGAVNAVAVDPNRDQYCTVSSDGTLRIW 799
D+ +AVG+ +G++G+ ++ TH YT +L + H AV + + + S DG + W
Sbjct: 176 DSAVVAVGSADGSVGLYSVETHTYTHMLNKGHSKAVTDMCWRADGRTLYSSSLDGHVIGW 355
Query: 800 HLATHQQLYEFDAPGEAVSAIAYHPHPSHHELAAGFANGRLRVFDVPSTTLLQEHHQHRA 859
++ T + ++ A + S L A+ ++++D+ + +LQE H
Sbjct: 356 NVNTLHMIEKWKATSGRHHGVHCVCLCSSSRLLT--ADHTIKMWDLTTKNVLQEFSGHST 529
Query: 860 GITELL--FSPGGDRLFSGGADGALVVYDTA 888
+ +LL P ++ G ++ A V+ A
Sbjct: 530 EVIKLLPVLKPSSEQNDIGDSNLACYVFSAA 622
>30256
Length = 961
Score = 39.3 bits (90), Expect = 0.015, Method: Composition-based stats.
Identities = 55/235 (23%), Positives = 95/235 (40%), Gaps = 5/235 (2%)
Frame = +3
Query: 638 AAVGPNIFTDIGFEAGVGVYGVDAFKVYVSSASGALFVVDYTTRQLDAIFQLHAAAINCL 697
A G I IG GV + V S +L V + T H++ + CL
Sbjct: 3 AVTGRCIKNLIGHTGGVWSSQMTGNTVISGSTDRSLKVWNADTGVCTHTLYGHSSTVRCL 182
Query: 698 VVSDGLVLTGGDDRLLRAWPLDFRDYL-LEAEHEGAVTGLAMSTDALRLAVGTENGTLGV 756
+S V++G D LR W ++ L + H AV + D R+ G + T+ V
Sbjct: 183 SLSGKKVVSGSRDATLRVWDIESGHCLNVLLGHMAAVR--CVQYDGKRVVSGAXDYTVRV 356
Query: 757 LAIPTHAYTTLLRSHCGAVNAVAVDPNRDQYCTVSS-DGTLRIWHLATHQQLYEFDAPGE 815
T + L+ H V ++ D Y S D ++R+W + + ++
Sbjct: 357 WDPDTASCLHTLQGHTNRVYSLQFD---GVYVVSGSLDTSIRVWDVRCGKLVHTLMGHQS 527
Query: 816 AVSAIAYHPHPSHHELAAGFANGRLRVFDVPSTTLLQE---HHQHRAGITELLFS 867
S + + L +G A+ ++V+DV + LQ ++HR+ +T L F+
Sbjct: 528 LTSGLEL----KDNLLVSGNADSTVKVWDVHTGKCLQTLLGPNKHRSAVTCLQFN 680
Score = 37.4 bits (85), Expect = 0.061, Method: Composition-based stats.
Identities = 59/281 (20%), Positives = 112/281 (39%), Gaps = 9/281 (3%)
Frame = +3
Query: 482 GHTAFVCALAVASDGRLLASCQEGKEAIVRLWDTANCACLAILNAHASGLSCVDLSPDLR 541
GH++ V L+++ + S ++A +R+WD + CL +L H + + CV D +
Sbjct: 156 GHSSTVRCLSLSGKKVVSGS----RDATLRVWDIESGHCLNVLLGHMAAVRCVQY--DGK 317
Query: 542 ALAAVGLDVQGRQTIALWNIAELRAAGGPKVELVTRHATEYNIKVLKFSAYQEDHLLTAG 601
+ + D T+ +W+ L T + L+F ++++
Sbjct: 318 RVVSGAXDY----TVRVWDPDTASC-------LHTLQGHTNRVYSLQFDGV---YVVSGS 455
Query: 602 RD-SIRIYRLKAGQLRGTSVRLVPQDKRVTSFAGGVSAAVGPNIFTDIGFEAGVGVYGVD 660
D SIR++ ++ G+L V + + +TS + N+ ++ V V+ V
Sbjct: 456 LDTSIRVWDVRCGKL----VHTLMGHQSLTS-----GLELKDNLLVSGNADSTVKVWDV- 605
Query: 661 AFKVYVSSASGALFVVDYTTRQLDAIF--QLHAAAINCLVVSDGLVLTGGDDRLLRAWPL 718
+T + L + H +A+ CL + V+T DD ++ W L
Sbjct: 606 -----------------HTGKCLQTLLGPNKHRSAVTCLQFNKKFVVTCSDDGTVKLWDL 734
Query: 719 DFRDY------LLEAEHEGAVTGLAMSTDALRLAVGTENGT 753
+ D+ L G V L + + AVG+ NGT
Sbjct: 735 NTGDFIRNLITLPSGGSGGVVWRLRCNNTKMVCAVGSRNGT 857
Score = 30.4 bits (67), Expect = 8.1, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 55/140 (39%), Gaps = 13/140 (9%)
Frame = +3
Query: 677 DYTTRQLDA-------IFQLHAAAINCLVVSDGLVLTGGDDRLLRAWPLDFRDYLLEAE- 728
DYT R D Q H + L V++G D +R W D R L
Sbjct: 339 DYTVRVWDPDTASCLHTLQGHTNRVYSLQFDGVYVVSGSLDTSIRVW--DVRCGKLVHTL 512
Query: 729 --HEGAVTGLAMSTDALRLAVGTENGTLGVLAIPT-HAYTTLL--RSHCGAVNAVAVDPN 783
H+ +GL + + L G + T+ V + T TLL H AV + N
Sbjct: 513 MGHQSLTSGLELKDNLL--VSGNADSTVKVWDVHTGKCLQTLLGPNKHRSAVTCLQF--N 680
Query: 784 RDQYCTVSSDGTLRIWHLAT 803
+ T S DGT+++W L T
Sbjct: 681 KKFVVTCSDDGTVKLWDLNT 740
>11493
Length = 535
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Frame = -2
Query: 432 EFVRCLAWLP-GTDEVVFAAASVVVIMGVADPGXXXXXXXXVTPGRQRYCLGHTAFVC-A 489
++R + LP G +V AS + I +A P TP R + L A C A
Sbjct: 336 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASP----------TP-RIKAELTSAAPACYA 190
Query: 490 LAVASDGRLLASCQEGKEAIVRLWDTANCACLAILNAHASGLSCVDLSPDLRALAAVGLD 549
LA++ D ++ SC + + +WD N + H G SC+D+SPD L GLD
Sbjct: 189 LAISPDSKVCFSCCS--DGNIAVWDLHNEILVRQFQGHTDGASCIDISPDGSRLWTGGLD 16
Score = 34.7 bits (78), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Frame = -2
Query: 728 EHEGAVTGLAMSTDALRLAVGTENGTLGV--LAIPTHAYTTLLRSHCGAVNAVAVDPNRD 785
+ + + + + D L VG E L + LA PT L S A A+A+ P+
Sbjct: 345 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSAAPACYALAISPDSK 166
Query: 786 QYCTVSSDGTLRIWHLATHQQLYEFDAPGEAVSAIAYHPHPS 827
+ SDG + +W L + +F + S I P S
Sbjct: 165 VCFSCCSDGNIAVWDLHNEILVRQFQGHTDGASCIDISPDGS 40
>03395
Length = 2795
Score = 39.3 bits (90), Expect = 0.019, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 95/232 (40%), Gaps = 21/232 (9%)
Frame = +2
Query: 860 GITELLFSPGGDRLFSGGADGALVVYDTAR----------MYAPAQYLSAGVRDIKV--- 906
G+T + + G +L SGG +G + V+D + + A + V I++
Sbjct: 2 GVTAIAVTSCGTKLVSGGGEGQVRVWDIVKDMLTGKTRGDLVANMKEHKGKVTAIQIHTN 181
Query: 907 --CCAVSSNGAFFASLVRDPYRRTTSLLVFHGRTLDPFMRIETDAAAYVKLAFSADC--- 961
CC +S ++++ D T S +V TL F C
Sbjct: 182 DRCCVSASTDG--STIIWDLITNTRSQIVL-ANTL-----------------FKCVCFGG 301
Query: 962 NELWALTSG--RRLDRYELKDGQLVQQIHEVSPLELTALCLDPAGRYAATAGADGLLRLW 1019
+L LTSG ++ +E+ DG L++++ + + +D G+ T G D LL+LW
Sbjct: 302 KDLHILTSGTDHKIGYWEVGDGGLLRELEGSQTGAINTIDIDRDGQTILTGGEDSLLKLW 481
Query: 1020 GCVPLPALRGLKGLPPNSAFLGHPSAILGAAF-HRSGYLVTVGDADCVCVWR 1070
R +G ++ +GH + I A Y+V+ G+ + +W+
Sbjct: 482 --------RYNEGEVTHTG-IGHSNQITKARICPNRHYIVSGGEDGALHIWK 610
Score = 35.8 bits (81), Expect = 0.19, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 52/158 (32%), Gaps = 8/158 (5%)
Frame = +2
Query: 696 CLVVSDGLVLTGGDDRLLRAWPLDFRDYL--LEAEHEGAVTGLAMSTDALRLAVGTENGT 753
C D +LT G D + W + L LE GA+ + + D + G E+
Sbjct: 290 CFGGKDLHILTSGTDHKIGYWEVGDGGLLRELEGSQTGAINTIDIDRDGQTILTGGEDSL 469
Query: 754 LGVLAIPTHAYTTLLRSHCGAVNAVAVDPNRDQYCTVSSDGTLRIWHLATHQQLYEFDA- 812
L + T H + + PNR + DG L IW D
Sbjct: 470 LKLWRYNEGEVTHTGIGHSNQITKARICPNRHYIVSGGEDGALHIWKFP--------DGC 625
Query: 813 -----PGEAVSAIAYHPHPSHHELAAGFANGRLRVFDV 845
P +S I H H + G R +V DV
Sbjct: 626 *VDCLPRHGISPIFQHTAHHIH*VLFGXGKTRFQVTDV 739
>21921
Length = 1341
Score = 38.5 bits (88), Expect = 0.026, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = -1
Query: 769 RSHCGAVNAVAVDPNRDQYCTVSSDGTLRIWHLATHQQLYEFDAPGEAVSAIAYHPHPSH 828
+ H G V ++ DP + S DGT+R W +++ + + G V+++A++P+PS
Sbjct: 492 KGHTGIVRSICPDPTGQWLVSGSDDGTIRFWEVSSGRCMKTLQV-GGCVTSVAWNPNPSL 316
Query: 829 HELAA 833
+AA
Sbjct: 315 CVVAA 301
>13278
Length = 870
Score = 38.5 bits (88), Expect = 0.028, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 53/98 (54%)
Frame = +1
Query: 789 TVSSDGTLRIWHLATHQQLYEFDAPGEAVSAIAYHPHPSHHELAAGFANGRLRVFDVPST 848
+ S D T+R+W + L+ E V ++A+ P + LA+G + + +++V +
Sbjct: 127 SASFDSTVRLWEVERGLCLHTLTKHQEPVYSVAFSPDGKY--LASGSFDKCVHIWNVQTG 300
Query: 849 TLLQEHHQHRAGITELLFSPGGDRLFSGGADGALVVYD 886
+L+ + + GI E+ ++ GD++ + +DG++ V D
Sbjct: 301 SLVHSY-KGTGGIFEVCWNHRGDKVGASASDGSVFVLD 411
Score = 38.1 bits (87), Expect = 0.034, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Frame = +1
Query: 1385 ADVVVWEAASGRELWRLRYHPLGVQALAFSPDGRWLVSLGRDPERGVVVWDVAAGLLV 1442
+ V +WE G L L H V ++AFSPDG++L S D + V +W+V G LV
Sbjct: 142 STVRLWEVERGLCLHTLTKHQEPVYSVAFSPDGKYLASGSFD--KCVHIWNVQTGSLV 309
Score = 34.7 bits (78), Expect = 0.44, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 507 EAIVRLWDTANCACLAILNAHASGLSCVDLSPDLRALAAVGLDVQGRQTIALWNI 561
++ VRLW+ CL L H + V SPD + LA+ D + + +WN+
Sbjct: 139 DSTVRLWEVERGLCLHTLTKHQEPVYSVAFSPDGKYLASGSFD----KCVHIWNV 291
>15337
Length = 860
Score = 38.5 bits (88), Expect = 0.030, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Frame = -1
Query: 802 ATHQQLYEFDAPGEAVSAIAYHPHPSHHELAAGFANGRLRVFDVPSTTLLQEHHQHRAGI 861
+T LY + A+S A+ P + LA +G LRVF+ S L+ + G+
Sbjct: 365 STRNPLYRWVVGTGAISEFAFSPCSRY--LAVVGQDGHLRVFNYNSMELIGTMKSYFGGL 192
Query: 862 TELLFSPGGDRLFSGGADGALVVYD------TARMYAPAQYLSAGVRDIKVCCA 909
+ +SP G + +GG D + V+ R + +++ DI C A
Sbjct: 191 LCVCWSPDGKYIVTGGEDDLVTVWSFHEKRVVCRGHGHKSWVNVVAFDIHTCLA 30
>02948
Length = 1207
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 24/209 (11%)
Frame = -2
Query: 825 HPSHHELAAGFANGRLRV---FDVPSTTLLQEHHQHRAGITELLFSPGGDRLFSGGADGA 881
HP+ +A G A+G++ FD T+L H H +T L F+P G L SGG +
Sbjct: 729 HPTDVCIATGHASGKITFWWNFD-QDKTVLSVSHWHSLPVTCLAFTPEGSCLLSGGHECT 553
Query: 882 LVVYDTA---RMYAPAQYLSAGVRDIKVCCAVSSNGAFFASLVRDPYRR--TTSLLVFHG 936
LV + + + P L A + +I VS +G FF + D + T+S +
Sbjct: 552 LVRWQMNSEHKEFLPR--LGAPLHNI----VVSPDGVFFVTGHSDNVLQVITSSFSIMXA 391
Query: 937 RTLDPFMRIETDAAAYVKLAFSADCNELWALTSGR--RLDRYEL-KDGQLVQ-------- 985
+ ++ D+ V +D +T+GR L Y L D QL
Sbjct: 390 IRGLAWAQLGLDSVQPVPAGLLSDPRTGALVTNGRPGHLQFYSLTTDTQLYNLDIVGQNY 211
Query: 986 ----QIHEVSPL-ELTALCLDPAGRYAAT 1009
+H+ + L E+T DP+G + AT
Sbjct: 210 VSPDALHKPTTLTEVTCAAFDPSGDWLAT 124
Score = 30.4 bits (67), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 13/74 (17%)
Frame = -2
Query: 771 HCGAVNAVAVDP-NRDQYCTVSSDGTLRIW------------HLATHQQLYEFDAPGEAV 817
H G V +A++P N+ Q + DG + +W H L D G
Sbjct: 1200 HRGQVTGLALNPANKLQLLSCGLDGNINVWAYVDGVLLRSYSHYMPLHALVSVDXSGTFA 1021
Query: 818 SAIAYHPHPSHHEL 831
AIA PH SH L
Sbjct: 1020 VAIAQRPHLSHCSL 979
>15780
Length = 735
Score = 37.4 bits (85), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = -1
Query: 1387 VVVWEAASGRELWRLRYHPLGVQALAFSPDGRWLVSLGRDPERGVVVWDVA 1437
V+VW+ ASG + L H V AL FS DG L S G D + +WD+A
Sbjct: 702 VIVWDIASGTAVAHLTAHTDTVYALCFSRDGTVLASGGMD--NSIRLWDLA 556
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = -1
Query: 505 GKEAIVRLWDTANCACLAILNAHASGLSCVDLSPDLRALAAVGLDVQGRQTIALWNIAEL 564
G + V +WD A+ +A L AH + + S D LA+ G+D +I LW++A +
Sbjct: 717 GADHTVIVWDIASGTAVAHLTAHTDTVYALCFSRDGTVLASGGMD----NSIRLWDLARV 550
Query: 565 RAAGGPKVE 573
P+ +
Sbjct: 549 MEEQDPETD 523
>17266
Length = 480
Score = 36.6 bits (83), Expect = 0.10, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 60/144 (41%), Gaps = 2/144 (1%)
Frame = -1
Query: 778 VAVDPNRDQYCTVSSDGTLRIWHLATHQQLYEFDAPGEAVSAIAYHPHPSHHELAAGFAN 837
+++ P+ + + + D + ++W + F ++AI Y P+ H A G +
Sbjct: 441 LSLAPDMRTFVSGACDASAKLWDVRDGMCKQTFSGHESDINAITY--FPNGHAFATGSDD 268
Query: 838 GRLRVFDVPSTTL--LQEHHQHRAGITELLFSPGGDRLFSGGADGALVVYDTARMYAPAQ 895
R+FD+ + + H GIT + FS G L G D ++D +
Sbjct: 267 ATCRLFDIRADQEIGMYSHDNIICGITSVAFSKSGRLLLGGYDDFNCNIWDVLKQERTG- 91
Query: 896 YLSAGVRDIKVCCAVSSNGAFFAS 919
+ AG + C V+ +G+ A+
Sbjct: 90 -VLAGHDNRVSCLGVTEDGSAVAT 22
>21105
Length = 650
Score = 36.2 bits (82), Expect = 0.14, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Frame = +1
Query: 770 SHCGAVNAVAVDPNRDQYCTVSSDGTLRIWHLATHQQLYEFDAP----GEAVSAIAYHPH 825
+H +V ++AVDPN + S D ++R+W+L + + E + E++ +A+HP
Sbjct: 184 AHLDSVTSLAVDPNGLYLLSGSHDCSIRLWNLDSKTCVQEITSHRKKFDESIHDVAFHPQ 363
Query: 826 PSHHELAAGFANGRLRVF 843
+ +A+ A+ +VF
Sbjct: 364 KPY--IASAGADALAKVF 411
>17602
Length = 481
Score = 35.8 bits (81), Expect = 0.17, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +3
Query: 482 GHTAFVCALAVASDGRLLASCQEGKEAIVRLWDTANCACL-AILNAHASGLSCVDLSPDL 540
H+ V A+ DG L+ S + + R+WDTA+ CL +++ +S V SP+
Sbjct: 48 AHSDPVTAVHFNRDGSLIVS--SSYDGLCRIWDTASGQCLXTLIDDDNPPVSFVKFSPNG 221
Query: 541 RALAAVGLDVQGRQTIALWNIAE 563
+ + A LD T+ LW+ ++
Sbjct: 222 KYILAATLD----NTLKLWDYSK 278
>13335
Length = 863
Score = 35.8 bits (81), Expect = 0.21, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 49/107 (45%), Gaps = 15/107 (14%)
Frame = +1
Query: 1387 VVVWEAASGRELWRLRYHPLGVQALAFSPDGRWLVSLGRDPERGVVVWDVAAG------L 1440
+ +WE A+ + + H V ALA+SP+G +LVS P + VWD + G L
Sbjct: 133 ICMWEVATQKLVRSYVGHEDSVMALAYSPNGHYLVS--GSPNGDLYVWDASFGHCRHLTL 306
Query: 1441 LVAA---GRT--EQSP---RAAAWLWGGHNPAFATAGADGLL-LWTL 1478
V A G T E SP A A N AT G D L+ LWT
Sbjct: 307 RVDAHDLGVTCCEFSPTFGTACAENSSTCNLLLATGGKDNLIKLWTF 447
>01462
Length = 995
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 57/152 (37%), Gaps = 20/152 (13%)
Frame = +2
Query: 692 AAINCLVVSDGL----VLTGGDDRLLRAWPLDFRDYLLEAE-HEGAVTGLAMSTDALRLA 746
A +N + V + + + G DR + W ++ YL E H+ + + M DA
Sbjct: 194 AEVNSIAVDEKMGTRRLYAGAGDRKIHVWDIEAGQYLNAMEGHKDYIHKVVMKNDAQECV 373
Query: 747 VGTENGTLGVLAIPTHAYTTLLRSHC---------------GAVNAVAVDPNRDQYCTVS 791
+E+GT+ + I + T HC + +A+DP + +
Sbjct: 374 SASEDGTVRMWDIRSSTETV----HCLEPSKNELCSRPLLGKWLRCLALDP-EEGWLVCG 538
Query: 792 SDGTLRIWHLATHQQLYEFDAPGEAVSAIAYH 823
L WHL T FD P + + +H
Sbjct: 539 GGPKLSAWHLRTLAPTTIFDTPSVSQNVALFH 634
>18981
Length = 407
Score = 34.7 bits (78), Expect = 0.41, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Frame = -2
Query: 701 DGLVLTGGDDRLLRAWPLDFRDYLLEAE-HEGAVTGLAMSTDALRLAVGTENGTLGVLAI 759
D ++++ DR LR W L L H V + + R+ G+ + TL V +
Sbjct: 388 DNMIISAATDRTLRVWCLKNTCLLHTLRGHNDDVECVCIY--GRRVVSGSWDKTLIVWEV 215
Query: 760 PTHAYTTLLRSHCGAVNAVAVDPNRDQYCTVSSDGTLRIWHLATHQQL 807
T L H A+ AV D + + S+DG +R W L T Q L
Sbjct: 214 DTGRPVHQLHGHTEAITAVQFDEGKA--VSGSADGDVRTWALDTGQCL 77
>19863
Length = 502
Score = 34.3 bits (77), Expect = 0.58, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +1
Query: 741 DALRLAVGTENGTLGVLAIPTHAYTTLLRSHCGAVNAVAVDPNRDQYCTVSSDGTLRIWH 800
D L+L G+ + ++ V + L+ H G VN V ++ + S+D T+RIW+
Sbjct: 4 DGLQLVSGSSDMSIVVWDVENGVQKLRLQGHAGWVNDVHFSQDQCWLLSCSNDNTVRIWN 183
Query: 801 LATHQQL 807
+ Q+
Sbjct: 184 IEESDQI 204
Score = 33.1 bits (74), Expect = 1.2, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +1
Query: 1387 VVVWEAASGRELWRLRYHPLGVQALAFSPDGRWLVSLGRDPERGVVVWDV 1436
+VVW+ +G + RL+ H V + FS D WL+S D V +W++
Sbjct: 43 IVVWDVENGVQKLRLQGHAGWVNDVHFSQDQCWLLSCSND--NTVRIWNI 186
>02960
Length = 1577
Score = 34.3 bits (77), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 29/147 (19%)
Frame = +2
Query: 769 RSHCGAVNAVAVDPNRDQYCTVSSDGTLRIWHLATH---QQLYEFDAP------------ 813
R H +V+ VAV P+ Q CT S D L++W + Q + + P
Sbjct: 746 RGHAASVDCVAVSPDSQQMCTGSWDKMLKLWSTDCNVDGDQSEDTERPSKKKKSAKSTTQ 925
Query: 814 -----------GEAVSAIAYHPHPSHHELAAGFANGRLRVFDVPS---TTLLQEHHQHRA 859
EAVSA+ + H + + LR++D+ + T+L+Q
Sbjct: 926 TRVPVLTLSGHAEAVSAVRW---LDPHRVVTSSWDHSLRLWDLHTAQQTSLIQG----SK 1084
Query: 860 GITELLFSPGGDRLFSGGADGALVVYD 886
+ ++ +SP L +G AD + + D
Sbjct: 1085AVLDVAYSPLSHMLITGSADRHVRLVD 1165
>17298
Length = 476
Score = 34.3 bits (77), Expect = 0.60, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = -1
Query: 769 RSHCGAVNAVAVDPNRDQYCTVSSDGTLRIWHL--ATHQQLYEFDAPGEAVSAIAYHPHP 826
R H G VN V + + S D T+R W +H + D ++V++I
Sbjct: 221 RDHAGTVNCVKFNEESTVILSGSLDNTVRAWDTRSRSHTPIQVLDEATDSVTSI----QV 54
Query: 827 SHHELAAGFANGRLRVF 843
S +E+ G A+GR+R +
Sbjct: 53 SDYEILTGSADGRVRRY 3
>10162
Length = 1629
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Frame = +3
Query: 733 VTGLAMSTDALRLAVGTENGTLGVLAIPTHAYTTL--LRSH-----CGAVNAVAVDPNRD 785
+T L A L GT+ G + + +P+ Y+ + L+SH CG + PN
Sbjct: 36 ITWLQWHGGAHVLLAGTQGGEVWLWQVPSQDYSKMKMLQSHGQPSLCGKIL-----PNGK 200
Query: 786 QYCTVSSDGTLRIWHLAT 803
C SDG +++W L T
Sbjct: 201 YVCVGYSDGVVKLWDLKT 254
>07542
Length = 1027
Score = 33.5 bits (75), Expect = 0.84, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 837 NGRLRVFDVPSTTLLQEHHQHRAGITELLFSPGGDRLFSGG 877
NG + ++DVP L GIT + FS G+ LF+GG
Sbjct: 7 NGDVAIYDVPHGGLTAVFEGQPGGITHVAFSKDGNYLFAGG 129
>01249
Length = 1743
Score = 33.5 bits (75), Expect = 0.84, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = -1
Query: 729 HEGAVTGLAMSTDALRLAVGTENGTLGVLAIPTHAYTTLLRSHCGAVNAVAVDP 782
H AVT LA S+D RLA G++NG + + + + T+L S GAV V + P
Sbjct: 918 HSDAVTCLAFSSDGQRLASGSQNGKVIIWNMESGDSTSLDIS--GAVGNVMIIP 763
>02147
Length = 1547
Score = 33.1 bits (74), Expect = 1.1, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +2
Query: 728 EHEGAVTGLAMSTDALRLAVGTENGTLGVLAIPTHAYTTLLRSHCGAVNAVAVDPNRDQY 787
E E ++ ++ G E+ + T + H G V+ V P+ + Y
Sbjct: 662 EAEAPISSASLHQSERFFVAGGEDFKMYKFDYETGKEIESFKGHFGPVHCVRFSPDGELY 841
Query: 788 CTVSSDGTLRIWH 800
+ S DGTLR+W
Sbjct: 842 ASGSEDGTLRLWQ 880
>01598
Length = 1545
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 88/237 (37%), Gaps = 31/237 (13%)
Frame = +1
Query: 703 LVLTGGDDRLLRAWPLD-----FRDYLLEAEHEGAVTG------LA---MSTDALRLAVG 748
L+ TG DR +R W L F L E TG LA + ++ +L
Sbjct: 106 LIATGSKDRTIRVWTLSQGKQIFMKKLPNQRREAGDTGSRFKVWLAIHWLKSNPEQLVSS 285
Query: 749 TENGTLGVLAI---PTHAYTTL----LRSHCGAV-NAVAVDPNRDQYCTVSSDGTLRIWH 800
+ G L + ++ AY T R H V N A P+ CT + D + +W
Sbjct: 286 SSGGDLLLWSLRYTKGQAYQTFQTSDYRPHMRPVFNICASGPDSKTLCTFAQDRQVVLWD 465
Query: 801 LATHQQLYEFDAPGEAVSAIAYHP-HPSHHELAAGFANGRLRVFDVPS-------TTLLQ 852
L T + + G V + P P +A G + +R +++ + TTL Q
Sbjct: 466 LETMEAVASMATLGGHVYCVRTSPIDPG--RVAVGVGDSMIRTWNMSNKTNPYDVTTLWQ 639
Query: 853 EHHQHRAGITELLFSPGGDRLFSGGA-DGALVVYDTARMYAPAQYLSAGVRDIKVCC 908
++ +T + + P + G DG + V+D P + R V C
Sbjct: 640 G---IKSKVTAVAWHPTKEGWLGFGTDDGRIGVFDVLSHKMPTLSNTFHHRTAYVVC 801
>14105
Length = 429
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Frame = +3
Query: 798 IWHLATHQQLYEFDAPGEAVSAIAYHP-HPSHHELAAGFANGRLRVF------DVPSTTL 850
+W L + LY F+ + V +A+ P HP+ AA +GRL ++ +VP+ ++
Sbjct: 3 LWSLKDTKPLYSFEDNSDYVMDVAWSPVHPA--LFAAVDGSGRLDLWNLNQDTEVPTASI 176
Query: 851 LQEHHQHRAGITELLFSPGGDRLFSGGADGALVVYDTARMYA 892
+ + + + ++P G + G G L VYD A A
Sbjct: 177 VVD---GAPALNRVSWTPSGLHVTIGDESGKLYVYDVAEHLA 293
>19140
Length = 573
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 48/101 (47%)
Frame = -3
Query: 768 LRSHCGAVNAVAVDPNRDQYCTVSSDGTLRIWHLATHQQLYEFDAPGEAVSAIAYHPHPS 827
L+ H V A+ ++ + Q + SSDGT+R+W L + + F E V A+ + S
Sbjct: 499 LKGHTDNVKALVLNRDGTQCLSGSSDGTIRLWSLGQQRCVATFRVHDEGVWAL--QANES 326
Query: 828 HHELAAGFANGRLRVFDVPSTTLLQEHHQHRAGITELLFSP 868
L +G + ++ D+ + + + +A + +L +P
Sbjct: 325 FTTLYSGGRDHQVWATDIKNPDNRELICEEKAPVLKLELTP 203
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = -3
Query: 482 GHTAFVCALAVASDGRLLASCQEGK-EAIVRLWDTANCACLAILNAHASGLSCVDLSPDL 540
GHT V AL + DG C G + +RLW C+A H G+ + +
Sbjct: 493 GHTDNVKALVLNRDG---TQCLSGSSDGTIRLWSLGQQRCVATFRVHDEGVWALQANESF 323
Query: 541 RALAAVGLDVQ 551
L + G D Q
Sbjct: 322 TTLYSGGRDHQ 290
>15972
Length = 1069
Score = 31.2 bits (69), Expect = 4.2, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Frame = +3
Query: 771 HCGAVNAVAVDPNRDQYCTVSSDGTLRIWH-----LATHQQLYEFD-----APGEAVSAI 820
H G V +AV P+ TVS D TLR+W+ +A + E APG +
Sbjct: 234 HKGPVRHLAVHPSGKLTLTVSQDRTLRLWNNMNGRIAFISNMKEAAESVRWAPGGLYYVV 413
Query: 821 AYHPHPSHHELAAGFANGRLRVFDVPST 848
A+ SH ++ + + G LR D T
Sbjct: 414 AFR---SHLDVYSVESKGLLRSIDTSQT 488
>12574
Length = 521
Score = 31.2 bits (69), Expect = 4.3, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 760 PTHAYTTLLRSHCGAVNAVAVDPNRDQYCTVSSDGTLRIW 799
PT+ L H A++AV PN D + S+D ++IW
Sbjct: 150 PTYTLKFTLAGHTKALSAVKFSPNGDWLASSSADKLIKIW 269
>14555
Length = 627
Score = 31.2 bits (69), Expect = 5.1, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 765 TTLLRSHCGAVNAVAVDPNRDQYCTVSSDGTLRIW 799
+T+L H V+ + + P+ CT S D TLRIW
Sbjct: 361 STILYGHDNRVSCLRISPDGTSLCTGSWDYTLRIW 257
>27806
Length = 419
Score = 30.8 bits (68), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = -1
Query: 745 LAVGTENGTLGVLAIPTHAYTTLLRSHCGAVNAVAVDPNRDQYCTVSSDGTLRIWHLATH 804
+ + + T + +I T A H G+VNAV P +D T S D T +W
Sbjct: 380 IGTASADHTARIYSIETGACVLTYGGHQGSVNAVRFHPGQDLVLTASGDHTAHVWRAQFS 201
Query: 805 Q-----QLYEFDAPGE 815
Q LY+ + GE
Sbjct: 200 QPSLMSDLYKSMSSGE 153
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|159481106|ref|XP_001698623.1| protein kinase-like
protein [Chlamydomonas reinhardtii]
(203 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
14594 48 3e-06
14601 34 0.043
01773 32 0.26
24379 31 0.37
15966 30 0.64
27864 30 0.99
07198 28 1.8
01019 27 5.6
01130 27 7.9
26849 27 8.3
>14594
Length = 1014
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Frame = +3
Query: 67 MDANGDGVLSVDEVRGAIQRSSGQAAPRLTVVQDVMAPVDFNNDGEVSVDEFSRGMALEL 126
D +GDG ++ E+ G + RS GQ P +QD++ VD + +G + +EF MA ++
Sbjct: 468 FDKDGDGTITTSEL-GTVMRSLGQN-PTENELQDMINEVDADGNGTIDFEEFLHMMARKM 641
Query: 127 G---VDERW---MRVMERDGGAGVSRAELAAGLGDLGRN-ADEVLRVAFDMADQNRDGRL 179
+E RV ++DG +S AEL + +LG DE + AD + DG +
Sbjct: 642 KDTDCEEELREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIKEADLDGDGMV 821
Query: 180 NAAEAQRAM 188
N E M
Sbjct: 822 NYEEFVTMM 848
>14601
Length = 472
Score = 33.9 bits (76), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Frame = +3
Query: 67 MDANGDGVLSVDEVRGAIQ--RSSGQAAPRL------TVVQDVMAPVDFNNDGEVSVDEF 118
+D N D +LS DEV +Q R S AP + TVV + D + DG +S +EF
Sbjct: 27 IDTNEDSLLSQDEVSAYLQQQRKSDPRAPPMNQMQHSTVVSQIFEHEDKDKDGFISHEEF 206
Query: 119 S 119
S
Sbjct: 207 S 209
>01773
Length = 1950
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 63 LVVSMDANGDGVLSVDEVRGAIQRSSGQAAPRLTV--VQDVMAPVDFNNDGEVSVDEF 118
L + D +GDG L DE++ A+ SGQ + T V ++ D NND ++ +EF
Sbjct: 382 LFKAKDKSGDGYLDRDELK-ALLDESGQ---KFTADDVSAILKSADKNNDNKICFEEF 543
>24379
Length = 424
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +3
Query: 108 NNDGEVSVDEFSRGMALELGVDERWMRVMERDGGAGVSRAELAAGLGDLGRNADEVL 164
N+D EVS DE++R +L R G G++ EL + DL D V+
Sbjct: 189 NDDDEVSCDEYTRSSFSQLQF---------RHGTYGINWTELVLSVLDLPTTRDVVI 332
>15966
Length = 362
Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 63 LVVSMDANGDGVLSVDEVRGAIQRSSGQAAPRLTV--VQDVMAPVDFNNDGEVSVDEF 118
L + D +GDG L DE++ A+ SGQ + T V ++ D NND ++ +EF
Sbjct: 149 LFKAKDKSGDGYLDRDELK-ALLDESGQ---KFTADDVSAILKSADKNNDNKICFEEF 310
>27864
Length = 343
Score = 29.6 bits (65), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Frame = +1
Query: 67 MDANGDGVLSVDEVRGAIQRSSGQAAP-RLTVVQDVMAPVDFNNDGEVSVDEFSRGMALE 125
+D + G +SV+E++ A+ S+G P V+ ++ D +N G ++ EF AL
Sbjct: 40 IDKDRSGNISVNELQQAL--SNGTWTPFNPETVRLMIGMFDRDNSGTINFQEFQ---ALW 204
Query: 126 LGVDERW---MRVMERDGGAGVSRAELAAGLGDLG 157
V + W R +RD + R EL DLG
Sbjct: 205 KYVTD-WQNCFRSYDRDNSGSIDRNELKMPXPDLG 306
>07198
Length = 1675
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 3/136 (2%)
Frame = -3
Query: 68 DANGDGVLSVDEVRGAIQRSSGQAAPRLTVVQDVMAPVDFNNDGEVSVDEF-SRGMALEL 126
DAN DG L+ E +S P+L + + M D N DG +S++EF G +
Sbjct: 452 DANKDGSLNSKEYFAFFMPNS---FPQLELER-FMRQSDKNKDGTISMEEFMPEGATGDT 285
Query: 127 GVD-ERWMRVMERDGGAGVSRAELAAGLGDLG-RNADEVLRVAFDMADQNRDGRLNAAEA 184
E + ++D +S E + +AD + F + D N DG+L+ E
Sbjct: 284 RTSSEESFKNYDKDKDGSLSLEEAMEWINPSSDEHADVEVEHLFTIGDVNHDGKLSKDEI 105
Query: 185 QRAMNMIATGLLGDYG 200
+ DYG
Sbjct: 104 LNKADQFVGSAATDYG 57
>01019
Length = 1705
Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 127 GVDERW-MRVMERDGGAGVSRAELAAGLGDLGRN-ADEVLRVAFDMADQNRDGRLNAAE 183
G++ W + V ++DG +S AEL + +LG DE + AD + DG++N E
Sbjct: 16 GINAEWPLLVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 192
>01130
Length = 1032
Score = 26.6 bits (57), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +3
Query: 63 LVVSMDANGDGVLSVDEVRGAIQRSSGQAAPRLTVVQDVMAPVDFNNDGEVSVDEFSRGM 122
L ++D G G L D R + S + V+ DV D DG++ VDEF
Sbjct: 546 LFRALDVQGKGFLDGDCCRHVFEASELTS----DVLSDVWNLSDVTRDGKLDVDEFCVAC 713
Query: 123 AL 124
L
Sbjct: 714 HL 719
>26849
Length = 649
Score = 26.6 bits (57), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +2
Query: 119 SRGMALELGVDERWMRVMERDGGAGVSRAELAAGLGDLGRNADEV-LRVAFDMADQNRDG 177
SRG LG+ R RVM++DG +S E G+ D+ + +E + F D + +G
Sbjct: 146 SRGPTGILGL-ARAFRVMDKDGSKVLSLEEFKKGILDMHIDINEADIEDMFYRFDNDGNG 322
Query: 178 RLNAAE 183
+N E
Sbjct: 323 TINMTE 340
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158282195|gb|EDP07948.1| flagellar associated protein
[Chlamydomonas reinhardtii]
(352 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07678 42 5e-04
05230 39 0.002
14594 37 0.016
17484 35 0.036
03616 35 0.036
14945 33 0.13
02929 33 0.14
22063 33 0.22
01491 32 0.37
37344 29 2.5
04067 29 3.2
26019 28 4.4
20881 28 4.8
>07678
Length = 958
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 70/161 (43%), Gaps = 5/161 (3%)
Frame = +1
Query: 155 NRVGEKRLQKMISTMRERME----AKLGNSNNNAFRMRKLFKMYDNDGSGRVHFEDFRNM 210
NR + + QK ++ + +E A L + + FK+ D+DG+ + F++F+
Sbjct: 217 NREMQMKCQKALAVATDPVEKLRLACLARGAAGIKGLARKFKIMDDDGNRSLDFKEFKKG 396
Query: 211 AETFGM-QLDDDSLMALYFVYDPEGSGYLEYEALVAQLMSPSDFAFYKGYVDYSQDKADE 269
FG+ Q + D + ++ +D + SG ++++ + +L P
Sbjct: 397 ITEFGLTQFEGDVIQEMFTCFDKDZSGTIDFDEFLVKLRPP------------------- 519
Query: 270 ARRVELLSQLKKKIGPVAGDLERLLKAFDSAGNGQVSRHDL 310
+SQ++K + ++R + D G+G V+ DL
Sbjct: 520 ------MSQMRKDL------IQRAFQKLDKTGDGVVTVEDL 606
>05230
Length = 843
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = -2
Query: 292 RLLKAFDSAGNGQVSRHDLVAGCASVGVVLGDKDFETLAPVMTYNSDGLIDYAAFC 347
+L FD+ G+G SR D++ G ++G+ + D M N DG I+YA F
Sbjct: 629 KLFAQFDTDGSGWASREDVIEGLENIGITIT-PDLRAKIKAMDGNKDGKINYADFL 465
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -2
Query: 188 RKLFKMYDNDGSGRVHFEDFRNMAETFGMQLDDDSLMALYFVYDPEGSGYLEY 240
RKLF +D DGSG ED E G+ + D L A D G + Y
Sbjct: 632 RKLFAQFDTDGSGWASREDVIEGLENIGITITPD-LRAKIKAMDGNKDGKINY 477
>14594
Length = 1014
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/165 (18%), Positives = 64/165 (38%)
Frame = +3
Query: 188 RKLFKMYDNDGSGRVHFEDFRNMAETFGMQLDDDSLMALYFVYDPEGSGYLEYEALVAQL 247
++ F ++D DG G + + + + G ++ L + D +G+G +++E + +
Sbjct: 450 KEAFSLFDKDGDGTITTSELGTVMRSLGQNPTENELQDMINEVDADGNGTIDFEEFLHMM 629
Query: 248 MSPSDFAFYKGYVDYSQDKADEARRVELLSQLKKKIGPVAGDLERLLKAFDSAGNGQVSR 307
AR K K +L + FD GNG +S
Sbjct: 630 ----------------------AR--------KMKDTDCEEELREAFRVFDKDGNGYISA 719
Query: 308 HDLVAGCASVGVVLGDKDFETLAPVMTYNSDGLIDYAAFCAVFNS 352
+L ++G L D++ + + + DG+++Y F + +
Sbjct: 720 AELRHVMTNLGEKLTDEEVDEMIKEADLDGDGMVNYEEFVTMMTA 854
Score = 30.8 bits (68), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 1/138 (0%)
Frame = +3
Query: 102 IALGDERIIPFRTSYGVDFKAPFNGTEQLRSPNRNEDLVKTTSSLTNIYKSSFNRVGEKR 161
+ L DE++ F+ ++ + F +GT TTS L + +S E
Sbjct: 417 VTLTDEQVAEFKEAFSL-FDKDGDGT-------------ITTSELGTVMRSLGQNPTENE 554
Query: 162 LQKMISTMRERMEAKLGNSNNNAFRMRKLFKMYDNDGSGRVHFEDFRNMAETFGMQLD-D 220
LQ MI+ + D DG+G + FE+F +M D +
Sbjct: 555 LQDMINEV-------------------------DADGNGTIDFEEFLHMMARKMKDTDCE 659
Query: 221 DSLMALYFVYDPEGSGYL 238
+ L + V+D +G+GY+
Sbjct: 660 EELREAFRVFDKDGNGYI 713
>17484
Length = 471
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -3
Query: 294 LKAFDSAGNGQVSRHDLVAGCASVGVVLGDKDFETLAPVMTYNSDGLIDYAAFC 347
+AFD G+G +S +L A +G L D D E++ + + DG ++Y F
Sbjct: 253 FRAFDQNGDGVISISELRQAMAKMGQKLSDADVESIIRDVDKDGDGFVNYEEFT 92
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = -1
Query: 194 YDNDGSGRVHFEDFRNMAETFGMQLDDDSLMALYFVYDPEGSGYLEYEA 242
YD DG+G++ +FR++ G L + L + D + SG +E ++
Sbjct: 465 YDQDGNGKITRNEFRSVVRMLGHSLSEKELEEMMQAADTDASGAIELKS 319
>03616
Length = 2372
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 160 KRLQKMISTMRERMEAKLGN-SNNNAFRMRKLFKMYDNDGSGRVHFEDFRNMAETFGMQL 218
KR Q + + ++ A+L + + R+ ++F YD D +G + E+ R++ + +
Sbjct: 803 KRSQGDLDQLVRQVRAQLKKIAITDKSRVDEMFLRYDRDRTGYISVENMRDLCRRLQLPV 982
Query: 219 DDDSLMALY--FVYDPEGSGYLE 239
DDD ++AL D EG LE
Sbjct: 983 DDDVILALVQQCTMDQEGRISLE 1051
>14945
Length = 1337
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +1
Query: 187 MRKLFKMYDNDGSGRVHFEDFRNMAETFGMQLDDDSLMALYFVYDPEGSGYLEYE---AL 243
+R+ F ++D DGSG + ++ + G + + + + D EG+G +++ +
Sbjct: 118 IREAFDLFDADGSGTIDAKELKVAMRALGFEPKKEEIKKMIAEIDKEGTGTIDFNDFLTI 297
Query: 244 VAQLMSPSD 252
+ Q MS D
Sbjct: 298 MTQKMSEKD 324
>02929
Length = 1353
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +2
Query: 185 FRMRKLFKMYDNDGSGRVHFEDFRNMAETFGMQLDDDSLMALYFVYDPEGSGYLEYEALV 244
FR+ F+ D DG G + E+F N + L A++ ++D E G +EY+ V
Sbjct: 176 FRVTDFFRRQDKDGDGFLTEEEFVNGMMQSRFPTNRTELNAVFDIFDREKRGLIEYKDFV 355
Query: 245 AQL 247
L
Sbjct: 356 DAL 364
>22063
Length = 688
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +3
Query: 187 MRKLFKMYDNDGSGRVHFEDFRNMAETFGMQLDDDSLMALYFVYDPEGSGYLEYE---AL 243
+R+ F ++D DGSG + ++ + G + + + + D EG+G +++ +
Sbjct: 177 IREAFDLFDADGSGTIDAKELKVAMRALGFEPKKEEIKKMIAEIDKEGTGTIDFNDFLTI 356
Query: 244 VAQLMSPSD 252
+ Q MS D
Sbjct: 357 MTQKMSEKD 383
>01491
Length = 1707
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 191 FKMYDNDGSGRVHFEDFRNMAETFGMQLDDDSLMALYFVYDPEGSGYLEYE 241
F++ D G + ED R + ++ G L +D + + D +GSG ++YE
Sbjct: 364 FRVLDKGNKGVIPVEDLRWLLKSLGDDLTEDEIEDMIVETDTDGSGTVDYE 516
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +2
Query: 191 FKMYDNDGSGRVHFEDFRNMAETFGMQLDDDSL 223
F ++D G+G V ++ N+ ++ G+Q++D+ L
Sbjct: 146 FHLFDKKGNGTVSTKELANVFKSLGLQVEDEKL 244
>37344
Length = 470
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +1
Query: 276 LSQLKKKIGPVAGDLERLLKAFDSAGNGQVSRHDLVAGCASVGVVLGDK------DFETL 329
L LK VA +L LLK + SAG + +LV C V VL + E L
Sbjct: 112 LPSLKXHXKKVATELFVLLKNYASAGAAKGDNRELVFVCFKVVTVLVREVNYYKMTTEHL 291
Query: 330 APVMTYNSDGLIDY 343
++TY + L D+
Sbjct: 292 QVLLTYCEEDLHDH 333
>04067
Length = 1920
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -1
Query: 193 MYDNDGSGRVHFEDFRNMAETFGMQLDDDSLMALYFVYDPEGSGYLEYEALVAQLM 248
+ D G + ED R + ++ G L +D + + D +GSG ++YE +M
Sbjct: 1920 VLDKGNKGVIPVEDLRWLLKSLGDDLTEDEIEDMILETDTDGSGTVDYEEFYKLMM 1753
>26019
Length = 1561
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 290 LERLLKAFDSAGNGQVSRHDLVAGCASVGVVLGDKDFETLAPVMTYNSD 338
++R++ FD+ GNG+V + + G + V GDK+ + Y+ D
Sbjct: 200 VQRVIDIFDTDGNGEVDFKEFIEGISQFSVK-GDKESKLRFAFKIYDMD 343
>20881
Length = 2017
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 5/114 (4%)
Frame = +1
Query: 205 EDFRNMAETFGMQLDDDSLMALYFVYDPEGSGYLEYEALVAQLMSPSDFAFYKGYVDYSQ 264
E+ + A FG+ LDD SL L F G + E A V +Q
Sbjct: 490 EELTDRALQFGLLLDDISLTHLTF-----GREFTE--------------AVESKQV--AQ 606
Query: 265 DKADEARRVELLSQLKKKIGPVAGD-----LERLLKAFDSAGNGQVSRHDLVAG 313
+A+ AR V ++ +KK ++ + E+L KAF AG G V L A
Sbjct: 607 QEAERARFVVEKAEQQKKAAVISAEGDSLAAEQLAKAFGEAGEGLVELRKLEAA 768
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|159491050|ref|XP_001703486.1| centriole proteome
protein [Chlamydomonas reinhardtii]
(3124 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
14649 39 0.028
>14649
Length = 650
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -1
Query: 1241 EMFNKALQVFPREGYDELY--AALSGSLRSGQPALHRASYPVVDNAIQAITGGW 1292
EM KAL+ FP E EL AA SG R+ P++ S P +D + + +T +
Sbjct: 200 EMIQKALETFPSESVKELVPEAAASGKSRTSHPSISEDSSPTMDESDRDLTPDF 39
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158277495|gb|EDP03263.1| flagellar associated protein
[Chlamydomonas reinhardtii]
(496 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
17369 35 0.058
11187 30 2.8
11815 29 4.5
04926 28 5.7
>17369
Length = 1079
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 31/67 (46%)
Frame = -3
Query: 94 DTKAFSKTGGGYWISQRVLPPHTAFTATTTYRAETLNAEPNTAAILDRSQGLASTLVGYE 153
+ +AF GG I R LP FTATT E EPN + +LD +G+ V Y
Sbjct: 828 EAQAFLSRGGQTIIRMRGLP----FTATTAQVLEFFTREPNASEVLDGEEGI--LFVHYP 667
Query: 154 AARQAGE 160
R G+
Sbjct: 666 DGRSTGD 646
>11187
Length = 1232
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 130 NAEPNTAAILDRSQGLASTLVGYEAARQAGEVRRSISADPRAR 172
N NT D S+G+ + ++ + +G+VRR IS+ RAR
Sbjct: 823 NMVANTVNC-DVSRGVGARIINLAVVQASGDVRRVISSSXRAR 698
>11815
Length = 2277
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 460 QVYYKEAKSQGALGIKTAQPSKLTHYGAPF 489
Q+ E + Q +GIK A +K+T Y APF
Sbjct: 430 QIERGETRIQRRIGIKKALDAKMTRYRAPF 519
>04926
Length = 1664
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Frame = +1
Query: 321 LAGGTTRNVSHIPRYTGHIPASEYATPEARAQGEAAEPRPDHKSQALTYTLDQYPRGRLP 380
L + RNV+H+ + + + EAR G A E S+A +D R ++
Sbjct: 64 LVIKSQRNVAHMHNHMPTMTRLQERLTEARQSGNAVE-----ASRAAQELMDFMKRNKIQ 228
Query: 381 GYTGF---KAQAP--ANIDAGLKHSMKLPCHSTTSG 411
+ F AQ P ++ GL+ LP S +G
Sbjct: 229 PFKNFLVPLAQMPVFVSVFVGLRQMANLPVXSMKTG 336
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158271903|gb|EDO97713.1| flagellar associated protein
[Chlamydomonas reinhardtii]
(323 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
20659 33 0.17
15171 28 4.4
26702 28 4.6
>20659
Length = 1365
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Frame = +2
Query: 20 LIGNWVEERELKELTGVTRNLAASQALKDTSDGTSPTRSLGDALTATHPRVIEHVQAQTH 79
L+ NWVEER +K + A+K + TS + L D H V+ + +
Sbjct: 101 LLENWVEERAVKHI---------DPAIKLEGNVTSKAQILKDG----HKGVLT-TEFDAN 238
Query: 80 AADWQSTVQATYRPPS-DATRNAAAYVNTSKMGPRERMLHEQLMRE 124
A++ ++TV+ TY PP DATR SK ERML ++ E
Sbjct: 239 ASN-KTTVRVTYTPPQPDATRKIG-----SKKELMERMLFAKVCNE 358
>15171
Length = 624
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 57 RSLGDALTATHPRVIEHVQAQTHAADWQSTVQATYRPPSD 96
RS+ D + +++ H+Q T AA W S +Q R PS
Sbjct: 535 RSISDLTQSWLAQILVHLQRSTIAAWWMSRMQRLMREPSS 416
>26702
Length = 2101
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = -1
Query: 5 TQPYTSYNKQDEVPTLIGNWVEERELKELTGVTRNLAASQALKDTSDGTSPTRSLGDALT 64
T P +S + Q VP + G E+ L +L + + +T S LG
Sbjct: 2098 TPPTSSLDLQVTVPRMEGQTSVRSEVMRL-----DLLPAFHVYNTELHLSSLSPLGSVRV 1934
Query: 65 ATHPRVIEHVQAQT 78
AT P+V+EH+Q ++
Sbjct: 1933 ATLPKVMEHIQVRS 1892
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158272191|gb|EDO97995.1| centriole proteome protein
[Chlamydomonas reinhardtii]
(1828 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02638 35 0.33
04138 32 1.7
13592 32 2.1
18215 32 2.2
18929 31 4.6
>02638
Length = 1490
Score = 34.7 bits (78), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 15/86 (17%)
Frame = +1
Query: 1757 ACDVASVGLLLLDAAAFRATAGGLRAYTEGRMGL-------PARLPQGL----RDLVARL 1805
ACDV SVG ++++ R + P +P+ + RDL+ R
Sbjct: 76 ACDVWSVGCVMIEMCTCRPPWNSHDISNHLALIFKIASSVDPPPIPENMSPPVRDLMLRC 255
Query: 1806 TAADASQRPSAREALAHP----YLQG 1827
D+ RPSA++ L HP Y QG
Sbjct: 256 LEQDSDFRPSAKDLLMHPLFTKYSQG 333
>04138
Length = 800
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 24/51 (47%)
Frame = +1
Query: 1775 ATAGGLRAYTEGRMGLPARLPQGLRDLVARLTAADASQRPSAREALAHPYL 1825
A A G + R + P GL DL RL D SQR SA EAL H +
Sbjct: 442 ALAAGRKNIIRDRFARILKDPYGL-DLFERLLKMDPSQRISADEALNHDFF 591
>13592
Length = 980
Score = 32.0 bits (71), Expect = 2.1, Method: Composition-based stats.
Identities = 47/199 (23%), Positives = 73/199 (36%), Gaps = 14/199 (7%)
Frame = +2
Query: 1640 VPEPLLKRIAVALLSALVPLHEAGICHGAIAPDCVSVVTASSTEPTPSIGGSSSTQFLVT 1699
+PE L +R LLS + LH+ GI H I + +V S++ G + Q T
Sbjct: 272 LPEALSRRFTAQLLSGVAELHKHGIVHRDIKTANIFLVDGSNSLKLGDFGSAVKIQAHTT 451
Query: 1700 SCGLAAPVDAAGVVEQRRMRVKGSALEYAAPEVRAHLAAARSGCDIDSEAAVPVVTVACD 1759
P + G V + Y APEV ++ D A D
Sbjct: 452 -----VPGELQGYVGTQ---------AYMAPEV-----FTKTNSDGHGRLA--------D 550
Query: 1760 VASVGLLLLDAAAFRATAGGLRAYTE--------GRMGL------PARLPQGLRDLVARL 1805
+ SVG ++++ A+ G R + + ++G+ P L Q D +
Sbjct: 551 IWSVGCVVVEMAS------GKRPWAQFDSNFQIMFKVGMGEKPQAPESLSQEGHDFIDHC 712
Query: 1806 TAADASQRPSAREALAHPY 1824
D QR SA E L +
Sbjct: 713 LQHDPKQRLSAIELLEQNF 769
>18215
Length = 466
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +3
Query: 921 DPARLLPARDVAHLNHPLELEWVSRGGPPPAANKLPAMFFQVCTLDKLNRYTSQGYGW 978
P RL+P + A LE + PPPA + LPA+ Q TL + R T W
Sbjct: 228 HPRRLVPKKPAA-------LEHLQTATPPPAYSALPALSVQTPTLPRNRRVTQVTTPW 380
>18929
Length = 440
Score = 30.8 bits (68), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 1798 LRDLVARLTAADASQRPSAREALAHPYLQGL 1828
L+ ++ R+ + D QRP+A + LAHP L L
Sbjct: 58 LQQVIRRMMSPDPRQRPTANQLLAHPTLAAL 150
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|89160861|gb|ABD62981.1| AGG3 [Chlamydomonas
reinhardtii]
(201 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
19041 31 0.42
13828 28 2.5
>19041
Length = 442
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Frame = +2
Query: 54 PPKS---DYPIITAKELTEADGFV-----FGFPTRFGMMAAQMKSFFDTTGQLWQAGALH 105
P KS D ++T L F+ FGF ++ + A ++ FD+ G L+ AG L
Sbjct: 227 PVKSRPLDATLLTFGSLLHLLCFMLSSAAFGFLSKLCLFALHLQPLFDSVGGLFPAGILQ 406
Query: 106 GKPAS 110
P S
Sbjct: 407 SLPQS 421
>13828
Length = 2681
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -2
Query: 132 QLAHHGMIFVPAGFAAGSIMFGVKDARGGSAWGAGTLAGP 171
QL H + VPAG AG FG+ D RGG A + P
Sbjct: 781 QLRDHQL--VPAGDLAGHSAFGLDDVRGGCVTKATQHSLP 668
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= jgi|Chlre3|193726|estExt_fgenesh2_pg.C_460051
(300 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00433 31 0.51
20272 28 4.9
>00433
Length = 1749
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = -2
Query: 215 SSYRYVAILADSGCYGLELG----VGGAPSVLPPSDAGTCLPCQGPYDNAKYSWEGLY 268
S+ + ++ ++GCY L V G P VLP + C PY K+ E ++
Sbjct: 1208 SAINLIEVMQENGCYNLIFSSSATVYGPPKVLPLVETLETGGCTNPYGRTKFFIENIF 1035
>20272
Length = 417
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 162 LTFDVPEPQG--CYAFVCDGPRGCSAVDTHG 190
L FD EP G ++F C P CSAV +H
Sbjct: 156 LLFDRLEPTGFAMWSFYCFVPSACSAVSSHS 248
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158277685|gb|EDP03452.1| flagellar associated protein
[Chlamydomonas reinhardtii]
(137 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08060 29 0.57
19097 29 0.64
00340 27 2.8
19410 27 3.5
13421 25 8.3
>08060
Length = 1880
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 1 MSRSYPGEQVEHAFNSKRLKNWEVPAVDKS 30
MS +Y Q E AF + ++NWEVP ++S
Sbjct: 1863 MSVNYHANQYEKAFKPEIIRNWEVPKGNQS 1774
>19097
Length = 434
Score = 28.9 bits (63), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -2
Query: 74 NFTQTTPVFMDSAPRWPKENPTWPKNMKATMGYKGIQSNYLPTNTVTL 121
F Q +P F+D RW P W N++ ++ + Q+ Y + +L
Sbjct: 211 QFLQKSPTFVDEMFRW*SFCPQWDSNLRLSI*QRRRQALYQLHHQCSL 68
>00340
Length = 1059
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +3
Query: 76 TQTTPV---FMDSAPRWP-KENPTWPKNMKATMGYKGIQSNYLPTNTVTLKAVEVPGT 129
T+T P+ M R P +E+PTW A++ Y ++ ++P+ +A PG
Sbjct: 120 TETLPLKVKLMQEIIRHPHREDPTWTAPPAASLDYCYVRPQHIPSLNALCQAYFWPGI 293
>19410
Length = 495
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 81 VFMDSAPRWPKENPTWPKNMKATMGYKG 108
+F+D+ R PK+N + K K TM YK
Sbjct: 221 LFLDTFLRIPKKNTSITKQTKPTMPYKA 304
>13421
Length = 1163
Score = 25.4 bits (54), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 107 KGIQSNYLPTNTVTLKAVEVPGTTERNFNF 136
+ IQ + NT+T +V P T R FNF
Sbjct: 753 RNIQLLEIEWNTITYSSVNYPSTFHRAFNF 664
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158276156|gb|EDP01930.1| mitochondrial F1F0 ATP
synthase associated 10.0 kDa protein [Chlamydomonas reinhardtii]
(89 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
18231 28 1.3
16252 25 5.3
>18231
Length = 1782
Score = 27.7 bits (60), Expect = 1.3, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 19 FMPENVAHPYQKSFYTYATKKLFPRHWFLLAGF 51
F+P N+ P+Q+ F+ KKL + W GF
Sbjct: 308 FLPTNII-PFQQFFFCVCDKKLESKRWLFWFGF 213
>16252
Length = 789
Score = 25.4 bits (54), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 43 RHWFLLAGFTFTITLYGTLDSLRDAGKKKAYDEAVL 78
++ FLL GF T+ LDSL D K+K + +AV+
Sbjct: 140 KNGFLLDGFPRTVVQAQKLDSLLD--KRKTHLDAVI 241
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|159483131|ref|XP_001699616.1| flagellar associated
protein [Chlamydomonas reinhardtii]
(426 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30816 30 1.9
>30816
Length = 909
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 399 LRDQADVDFISNVLEEMALNRAKATQG 425
L D + F+SNV++++ +NR K QG
Sbjct: 104 LPDHNLISFVSNVMQQVIINRLKLMQG 184
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= jgi|Chlre3|176257|fgenesh2_pg.C_scaffold_31000170
(390 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
14212 29 3.2
>14212
Length = 505
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 7/43 (16%)
Frame = -2
Query: 326 LSRVAQKVADLGDKLMLPRLCSC-------PNNASPFDPLYVQ 361
+S V + VADL L++P+LC C P FD +YV
Sbjct: 147 VSYVYRLVADLNPFLLVPKLCVCILCACVYPTLYKIFDCIYVH 19
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|159490848|ref|XP_001703385.1| centriole proteome
protein [Chlamydomonas reinhardtii]
(301 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
27983 28 3.9
>27983
Length = 660
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 95 ITSQQDPEPDVALAASHLEGLTVQQMLDLDVDSLAVKID--KHHCATKKAVLDHFMETKA 152
I +Q +PE V +A +L+ L++ LDL+ + + KID HH T + H + T
Sbjct: 312 ILNQDEPEEGVCVAEEYLQRLSI*WSLDLN*GASSSKIDCPPHH-HTPTTMRRHLLNTVL 488
Query: 153 RL 154
R+
Sbjct: 489 RI 494
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158276326|gb|EDP02099.1| flagellar associated protein
[Chlamydomonas reinhardtii]
(171 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02713 27 4.5
23908 26 8.4
>02713
Length = 1799
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +2
Query: 113 YRSHKPVKLVPYASLTKSEYQANYNRTAQASEH----PRWVTMRAPYSVDYKTT 162
+ +H ++L+ K + A NRTA A +W+ +R Y+V KTT
Sbjct: 1055 HMNHLFIQLIQRLLHAKKHFLAIKNRTAIAKTSNKVLVKWIILREGYNVRSKTT 1216
>23908
Length = 2133
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 20 HYQTTKEHFHDSPNAKEPNKTSTFGLLYNNSTHFMDRRL 58
H TTK+HF+ PN++ N L N F+ +RL
Sbjct: 1631 HLXTTKQHFYSFPNSQLENT----CL*QNQQVTFLLKRL 1735
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158278929|gb|EDP04691.1| basal body protein
[Chlamydomonas reinhardtii]
(1352 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
15210 30 4.5
>15210
Length = 729
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 50 PPGDRPGLKRH--ALNSMIADYMRAVQYNYSLSVFKEESGVESRPL 93
P +RP + +N +I +Y+ +Y Y+ SV + ESG+ PL
Sbjct: 27 PADNRPVVSNENILINELIREYLEFNKYQYTSSVLQAESGMAKEPL 164
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158282155|gb|EDP07908.1| basal body protein
[Chlamydomonas reinhardtii]
(394 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02468 28 6.6
>02468
Length = 2514
Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = -3
Query: 152 DVRSKSDEAAKALMALRYEKKEKEDWRLQSEDLRRQLQVMQ 192
D ++ EAA M + E+K+KE+ + Q E+LRRQ + +Q
Sbjct: 427 DKMNQGKEAATLAMLVEAERKQKEELQKQQEELRRQTEALQ 305
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= jgi|Chlre3|136677|estExt_gwp_1W.C_10506
(235 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
31129 27 6.6
>31129
Length = 871
Score = 26.9 bits (58), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Frame = +2
Query: 55 AIRVKILIKSEGGQPKTIRVELTSESNLFFLYMHDLADVTFKQMQE-----TQRLMIEFP 109
+I+ I+ +G P T R LT L+F + H++ F + + +
Sbjct: 281 SIQPYIIFHLKGFNPVT-RFSLTFSFKLYFFHRHNIFTYLFMSTDT*LHSMSTKYFKKCS 457
Query: 110 DYPTVLMRMLNQCIREPHIYL 130
+ + LN C RE HIYL
Sbjct: 458 NKIHA*ISQLNSCHRETHIYL 520
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158282539|gb|EDP08291.1| flagellar associated protein
[Chlamydomonas reinhardtii]
(297 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06531 27 7.1
>06531
Length = 703
Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Frame = +2
Query: 104 ELEGGLGPMKESKRSTSPRA--VFGTATRDQQSKVWLDEELMKTAGGRDSPGPNT-YRQP 160
++ G GP+ S +A VF S+ W+D T R SPGP Y QP
Sbjct: 356 DVSGHKGPLHRCDIYGSLKAGAVFKRFMERGASQPWVDTLQELTGARRVSPGPLLHYFQP 535
Query: 161 G-GIGRMVDSKHNTAPTWRQGTEN 183
R ++ H P W T N
Sbjct: 536 LRAWLRRYNAAHGQTPGWDNATVN 607
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158283003|gb|EDP08754.1| flagellar associated protein
[Chlamydomonas reinhardtii]
(235 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
20140 27 9.4
>20140
Length = 1074
Score = 26.6 bits (57), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = -2
Query: 91 YTEANVAERLQTYGLADNIHYTIGPNAATEASWAPVHNLTTTNKEFYEIKPEAARAADPD 150
YT +AE ++ A+NIH ++GPN P N+ Y ++P+ RAA
Sbjct: 800 YTMQPMAESVKMQPWAENIHCSLGPN--IRCRLRP--NIX------YSLRPKMYRAASGR 651
Query: 151 TFRASGPSPFAKTGFCAK 168
+ A F++ C K
Sbjct: 650 IYSAD----FSRMLACDK 609
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158283903|gb|EDP09653.1| flagellar associated protein
[Chlamydomonas reinhardtii]
(312 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02979 27 9.6
>02979
Length = 2300
Score = 26.9 bits (58), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +1
Query: 129 KSGFHPKELRRSTRYDSEYSARFKPTSADYVGRLTHTYNTTSRFEGLTRVGTNGIAA 185
KSG P + R + YS ++P S + R H + + LT++G G+ +
Sbjct: 1885 KSGCGPGQPMHVQRAQT*YSVDWEPMSCAGIHRTIHIWKNQ---DSLTKIGIPGLTS 2046
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|159490770:1-2473 centriole proteome protein
[Chlamydomonas reinhardtii]
(2473 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158277380|gb|EDP03148.1| centriole proteome protein
[Chlamydomonas reinhardtii]
(451 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158281041|gb|EDP06797.1| centriole proteome protein
[Chlamydomonas reinhardtii]
(2287 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158280506|gb|EDP06263.1| flagellar associated protein
[Chlamydomonas reinhardtii]
(270 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158280598|gb|EDP06355.1| flagellar associated protein
[Chlamydomonas reinhardtii]
(242 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158276195|gb|EDP01969.1| flagella associated protein
[Chlamydomonas reinhardtii]
(424 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158283430|gb|EDP09180.1| flagellar associated protein
[Chlamydomonas reinhardtii]
(447 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158273709|gb|EDO99496.1| flagellar associated protein
[Chlamydomonas reinhardtii]
(670 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158272460|gb|EDO98260.1| basal body protein
[Chlamydomonas reinhardtii]
(1746 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= jgi|Chlre3|142067|Chlre2_kg.scaffold_3000040
(318 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|158281011|gb|EDP06767.1| flagella associated protein
[Chlamydomonas reinhardtii]
(501 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|159487563|ref|XP_001701792.1| flagella associated
protein [Chlamydomonas reinhardtii]
(501 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6979562|gb|AAF34540.1|AF196577_1 flagellar
protofilament ribbon protein [Chlamydomonas reinhardtii]
(367 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|159491286|ref|XP_001703602.1| predicted protein
[Chlamydomonas reinhardtii]
(765 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
***** No hits found ******
Database: contigs50plus
Posted date: Aug 11, 2009 9:57 AM
Number of letters in database: 28,359,218
Number of sequences in database: 39,407
Lambda K H
0.318 0.133 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 39407
Number of Hits to DB: 819,169,286
Number of extensions: 9681972
Number of successful extensions: 42769
Number of sequences better than 10.0: 608
Number of HSP's gapped: 42196
Number of HSP's successfully gapped: 1248
Length of database: 9,453,072
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 15 ( 6.9 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.3 bits)
S2: 36 (18.5 bits)