Publications from 2006

Evolution of enzymatic activities in the enolase superfamily: D-tartrate dehydratase from Bradyrhizobium japonicum.
Yew WS, Fedorov AA, Fedorov EV, Wood BM, Almo SC, Gerlt JA.
Biochemistry. 2006 Dec 12;45(49):14598-608. Pubmed

Evolution of enzymatic activities in the enolase superfamily: L-fuconate dehydratase from Xanthomonas campestris.
Yew WS, Fedorov AA, Fedorov EV, Rakus JF, Pierce RW, Almo SC, Gerlt JA.
Biochemistry. 2006 Dec 12;45(49):14582-97. Pubmed

Evolution of enzyme superfamilies.
Glasner ME, Gerlt JA, Babbitt PC.
Curr Opin Chem Biol. 2006 Oct;10(5):492-7. Epub 2006 Aug 28. Review. Pubmed

Evolution of structure and function in the o-succinylbenzoate synthase/N-acylamino acid racemase family of the enolase superfamily.
Glasner ME, Fayazmanesh N, Chiang RA, Sakai A, Jacobson MP, Gerlt JA, Babbitt PC.
J Mol Biol. 2006 Jun 30;360(1):228-50. Epub 2006 May 11. Pubmed

Evolution of enzymatic activities in the enolase superfamily: N-succinylamino acid racemase and a new pathway for the irreversible conversion of D- to L-amino acids.
Sakai A, Xiang DF, Xu C, Song L, Yew WS, Raushel FM, Gerlt JA.
Biochemistry. 2006 Apr 11;45(14):4455-62. Pubmed

A gold standard set of mechanistically diverse enzyme superfamilies.
Brown SD, Gerlt JA, Seffernick JL, Babbitt PC.
Genome Biol. 2006;7(1):R8. Epub 2006 Jan 31. Pubmed

D-Ribulose 5-phosphate 3-epimerase: functional and structural relationships to members of the ribulose-phosphate binding (beta/alpha)8-barrel superfamily.
Akana J, Fedorov AA, Fedorov E, Novak WR, Babbitt PC, Almo SC, Gerlt JA.
Biochemistry. 2006 Feb 28;45(8):2493-503. Pubmed