Alignment of sequences of cytochrome b from bacteria

Mauro Degli Esposti, March 1993



Rrubrum  **************ALKWFDERLPVLTVAHKELVVYPAPRNLNYFWNFGSLAGIAMIIMIAT
Rviridis **************IERWLDTRLPIVRMMYDQFVAFPVPKNINYAYAFGAILAVFLIIQIVS
Bjaponic **************ALQWIERRLPILGLMHSSFVAYPTPRNLNYWWTFGAILSFMLGMQILT
Rcapsula MSGIPHDHYEPKTGIEKWLHDRLPIVGLVYDTIM*IPTPKNLNWWWIWGIVLAFTLVLQIVT
Rsphaero MSGIPHDHYEPRTGIEKWLHSRLPIVALAYDTIM*IPTPRNLNWMWIWGVVLAFCLVLQIVT
Pdenitri MAGIPHDHYEPKTGFERWLHRRLPIVSLVYDTLM*IPTPKNLNWWWIWGIVLAFCLVLQIAT

Rrubrum  GIFLAMSYTAH*VDHAFDSVERIMRDVNYGWLMRYMHANGASMFFIVVYVHMFRGLYYGSYK
Rviridis GVVLAMHYVAQ*DTLAFASIEHIMRDVNYGWLIRYIHMNGASFFFFAVYAHTFRGMYYGSYK
Bjaponic GVILAMHYTPH*ADLAFKSVELIVRDVNYGWLLRNMHACGASMFFFAVYVHMLRGLYYGSYK
Rcapsula GIVLAMHYTPH*VDLAFASVEHIMRDVNGGWAMRYIHANGASLFFLAVYIHIFRGLYYGSYK
Rsphaero GIVLAMHYTPH*VDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYK
Pdenitri GIVLVMHYTPH*VDLAFASVEHIMRDVNGGYMLRYLHANGASLFFLAVYIHIFRGLYYGSYK

Rrubrum  PPREVLWWLGLVILLLMMATAFMGYVLPWGQMSFWGATVITNLFSAIPVV*GDDIVTLLWGG
Rviridis EPREVLWILGVIIIILMMATAFMGYVLPWGQMSFWGATVITNLFSAIPYI*GDPIVTWLWGG
Bjaponic EPREVLWILGVIIYLLMMATGFMGYVLPWGQMSFWGATVITNLFSAIPYF*GESIVTLLWGG
Rcapsula APREITWIVGMVIYLLMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPGI*GPSIQAWLLGG
Rsphaero APREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGI*GHSIQTWLLGG
Pdenitri APREVTWIVGMLIYLMMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPGV*GEAIQTWLLGG

Rrubrum  FSVDNPTLNRFFSLH*YLFPMLLFAVVFLHMWALH*VKKSNNPLGID******AKGPFDTIP
Rviridis YSVGNPTLTRFYSLH*YLLPFVIVGVVMLHVWALH*VTGQTNPTGVEVK******SEKDTVR
Bjaponic YSVGNPTLNRFFSLH*YLLPFLIAGVVVLHVWALH*VAGQNNPEGVEPK******SEKDTVP
Rcapsula PAVDNATLNRFFSLH*YLLPFVIAALVAIHIWAFH*TTGNNNPTGVEVRRTSKADAEKDTLP
Rsphaero PAVDNATLNRFFSLH*YLLPFVIAALVAIHIWAFH*STGNNNPTGVEVRRTSKAEAQKDTVP
Pdenitri PAVDNPTLNRFFSLH*YLLPFVIAALVVVHIWAFH*TTGNNNPTGVEVRRGSKEEAKKDTLP

Rrubrum  FHPY**YTVKDAFGLGIFLMVFCFFVFFA***PNFFGEPDNYIPANPMVTPTH***IVPEWY
Rviridis FTFP**ALTKDAVALGVCFIAFAWFVFFV***PNYLGHADNYIPANPGVTPAH***IVPEWY
Bjaponic FTPH**ATIKDMFGVACFLLLYAWFIFYM***PNYLGDADNYIPANPGVTPPH***IVPEWY
Rcapsula FWPY**FVIKDLFALALVLLGFFAVVAYM***PNYLGHPDNYVQANPLSTPAH***IVPEWY
Rsphaero FWPY**FIIKDVFALAVVLLVFFAIVGFM***PNYLGHPDNYIEANPLSTPAH***IVPEWY
Pdenitri FWPY**FVIKDLFALAVVLVVFFAIVGFM***PNYLGHPDNYIEANPLVTPAH***IVPEWY

Rrubrum  FLPFYAILRA******************VPDKLGGVLAMFGAILILFVLPWLDTSK*****V
Rviridis LLPFYAILRA******************VPDKLGGVIAMFGALVVLLFLPWLDGSK*****V
Bjaponic YLPFYAILRS******************IPNKLAGVIGMFSAIIILCFLPWLDAAK*****T
Rcapsula FLPFYAILRAFAADVWVVILVDGLTFGIVDAKFFGVIAMFGAIAVMALAPWLDTSK*****V
Rsphaero FLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSP*****V
Pdenitri FLPFYAILRAFTADVWVVMLVNWLSFGIIDAKFFGVIAMFGAILVMALVPWLDTSR*****V

Rrubrum  R*******************SATF**RPVFKGFFWVFLADCLLLGYLGAM*PAEEPYVTI*T
Rviridis R*******************SAAY**RPLYRIFFWLFVADCIFLGWLGAM*PAEGIYPTL*S
Bjaponic R*******************SSKY**RPLAKQFFWIFVAVCILLGYLGAQ*PPEGIYVIA*G
Rcapsula R*******************SGAY**RPKFRMWFWFLVLDFVVLTWVGAM*PTEYPYDWI*S
Rsphaero R*******************SGRY**RPMFKIYFWLLAADFVILTWVGAQ*QTTFPYDWI*S
Pdenitri R*******************SGQY**RPLFKWWFWLLAVDFVVLMWVGAM*PAEGIYPYI*A

Rrubrum  QLATIYYFLHFLVITPLVGWFEKPKPLPVSISSPVTTQA****************
Rviridis QVGTVWYFAHFLVIVPALGYFEKPKPLPESISAAVLEAHSRPSLLARLINR****
Bjaponic RVLTVCYFAYFLIVLPLLSRIETPRPVPNSISEAILAKGGKAVASVAIAL*****
Rcapsula LIASTYWFAYFLVILPLLGATEKPEPIPASIEEDFNSHYGNPAE***********
Rsphaero LIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNAHYSPATGGTKTVVAE***
Pdenitri LAGSAYWFAYFLIILPLLGIIEKPDAMPQTIEEDFNAHYGPETHPAE********